RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 PARPBPQ9NWS1 579 aa15.12■□□□□ 0.01
HMGN1-209ENST00000463631 FLVCR1Q9Y5Y0 555 aa15.12■□□□□ 0.01
HMGN1-209ENST00000463631 EIF1BO60739 113 aaKnown RBP15.11■□□□□ 0.01
HMGN1-209ENST00000463631 BCAS1O75363 584 aaPredicted RBP15.11■□□□□ 0.01
HMGN1-209ENST00000463631 SHBGP04278 402 aa15.11■□□□□ 0.01
HMGN1-209ENST00000463631 MATN1P21941 496 aa15.11■□□□□ 0.01
HMGN1-209ENST00000463631 PLAURQ03405 335 aa15.11■□□□□ 0.01
HMGN1-209ENST00000463631 GGTLC2Q14390 218 aa15.11■□□□□ 0.01
HMGN1-209ENST00000463631 IL23RQ5VWK5 629 aa15.11■□□□□ 0.01
HMGN1-209ENST00000463631 TYW3Q6IPR3 259 aaKnown RBP15.11■□□□□ 0.01
HMGN1-209ENST00000463631 EMBQ6PCB8 327 aa15.11■□□□□ 0.01
HMGN1-209ENST00000463631 ADGRG3Q86Y34 549 aa15.11■□□□□ 0.01
HMGN1-209ENST00000463631 CCDC103Q8IW40 242 aa15.11■□□□□ 0.01
HMGN1-209ENST00000463631 FNDC5Q8NAU1 212 aa15.11■□□□□ 0.01
HMGN1-209ENST00000463631 SLC35G5Q96KT7 338 aa15.11■□□□□ 0.01
HMGN1-209ENST00000463631 C3orf30Q96M34 536 aa15.11■□□□□ 0.01
HMGN1-209ENST00000463631 SORCS2Q96PQ0 1159 aa15.11■□□□□ 0.01
HMGN1-209ENST00000463631 C1QTNF6Q9BXI9 259 aa15.11■□□□□ 0.01
HMGN1-209ENST00000463631 SAP130Q9H0E3 1048 aa15.11■□□□□ 0.01
HMGN1-209ENST00000463631 SLC7A10Q9NS82 523 aa15.11■□□□□ 0.01
HMGN1-209ENST00000463631 TMEM181Q9P2C4 612 aa15.11■□□□□ 0.01
HMGN1-209ENST00000463631 PCDHGB4Q9UN71 923 aa15.11■□□□□ 0.01
HMGN1-209ENST00000463631 RNF103-CHMP3A0A140T963 221 aa15.1■□□□□ 0.01
HMGN1-209ENST00000463631 LOC390937A0A1W2PQ73 354 aa15.1■□□□□ 0.01
HMGN1-209ENST00000463631 AGR2O95994 175 aa15.1■□□□□ 0.01
HMGN1-209ENST00000463631 APEHP13798 732 aaKnown RBP15.1■□□□□ 0.01
HMGN1-209ENST00000463631 MPGP29372 298 aa15.1■□□□□ 0.01
HMGN1-209ENST00000463631 HTR3AP46098 478 aa15.1■□□□□ 0.01
HMGN1-209ENST00000463631 PRPS1P60891 318 aa15.1■□□□□ 0.01
HMGN1-209ENST00000463631 SNRPD2P62316 118 aaKnown RBP15.1■□□□□ 0.01
HMGN1-209ENST00000463631 SLC35A1P78382 337 aa15.1■□□□□ 0.01
HMGN1-209ENST00000463631 SQLEQ14534 574 aa15.1■□□□□ 0.01
HMGN1-209ENST00000463631 IL17RELQ6ZVW7 336 aa15.1■□□□□ 0.01
HMGN1-209ENST00000463631 OLIG3Q7RTU3 272 aa15.1■□□□□ 0.01
HMGN1-209ENST00000463631 C4orf33Q8N1A6 199 aa15.1■□□□□ 0.01
HMGN1-209ENST00000463631 ZNF563Q8TA94 476 aa15.1■□□□□ 0.01
HMGN1-209ENST00000463631 TMEM45BQ96B21 275 aa15.1■□□□□ 0.01
HMGN1-209ENST00000463631 OBP2BQ9NPH6 170 aa15.1■□□□□ 0.01
HMGN1-209ENST00000463631 ASIC5Q9NY37 505 aa15.1■□□□□ 0.01
HMGN1-209ENST00000463631 UPB1Q9UBR1 384 aa15.1■□□□□ 0.01
HMGN1-209ENST00000463631 WDR45Q9Y484 360 aa15.1■□□□□ 0.01
HMGN1-209ENST00000463631 IGHV4-61A0A0C4DH41 118 aa15.09■□□□□ 0.01
HMGN1-209ENST00000463631 RNASET2O00584 256 aaKnown RBP15.09■□□□□ 0.01
HMGN1-209ENST00000463631 ZNF208O43345 1280 aa15.09■□□□□ 0.01
HMGN1-209ENST00000463631 PDE5AO76074 875 aa15.09■□□□□ 0.01
HMGN1-209ENST00000463631 WNT11O96014 354 aa15.09■□□□□ 0.01
HMGN1-209ENST00000463631 PGRP06401 933 aa15.09■□□□□ 0.01
HMGN1-209ENST00000463631 SERPINB5P36952 375 aa15.09■□□□□ 0.01
HMGN1-209ENST00000463631 MAP2K6P52564 334 aa15.09■□□□□ 0.01
HMGN1-209ENST00000463631 CLDN8P56748 225 aa15.09■□□□□ 0.01
HMGN1-209ENST00000463631 SRSF2Q01130 221 aaKnown RBP15.09■□□□□ 0.01
HMGN1-209ENST00000463631 SLC17A1Q14916 467 aa15.09■□□□□ 0.01
HMGN1-209ENST00000463631 TSPO2Q5TGU0 170 aa15.09■□□□□ 0.01
HMGN1-209ENST00000463631 FRRS1Q6ZNA5 592 aa15.09■□□□□ 0.01
HMGN1-209ENST00000463631 CLECL1Q8IZS7 167 aa15.09■□□□□ 0.01
HMGN1-209ENST00000463631 FBXO17Q96EF6 278 aa15.09■□□□□ 0.01
HMGN1-209ENST00000463631 APOPT1Q96IL0 206 aa15.09■□□□□ 0.01
HMGN1-209ENST00000463631 OR51I1Q9H343 314 aa15.09■□□□□ 0.01
HMGN1-209ENST00000463631 MOKQ9UQ07 419 aa15.09■□□□□ 0.01
HMGN1-209ENST00000463631 SLU7O95391 586 aaKnown RBP15.08■□□□□ 0
HMGN1-209ENST00000463631 G6PDP11413 515 aa15.08■□□□□ 0
HMGN1-209ENST00000463631 ZNF23P17027 643 aa15.08■□□□□ 0
HMGN1-209ENST00000463631 PAX7P23759 505 aa15.08■□□□□ 0
HMGN1-209ENST00000463631 ALDH3A1P30838 453 aa15.08■□□□□ 0
HMGN1-209ENST00000463631 ARRB2P32121 409 aa15.08■□□□□ 0
HMGN1-209ENST00000463631 RYKP34925 604 aa15.08■□□□□ 0
HMGN1-209ENST00000463631 OR2B6P58173 313 aa15.08■□□□□ 0
HMGN1-209ENST00000463631 FUT5Q11128 374 aa15.08■□□□□ 0
HMGN1-209ENST00000463631 MAD2L1Q13257 205 aaPredicted RBP15.08■□□□□ 0
HMGN1-209ENST00000463631 ATAD3BQ5T9A4 648 aa15.08■□□□□ 0
HMGN1-209ENST00000463631 C9orf135Q5VTT2 229 aa15.08■□□□□ 0
HMGN1-209ENST00000463631 LIPNQ5VXI9 398 aa15.08■□□□□ 0
HMGN1-209ENST00000463631 PAQR6Q6TCH4 344 aa15.08■□□□□ 0
HMGN1-209ENST00000463631 KLHL24Q6TFL4 600 aa15.08■□□□□ 0
HMGN1-209ENST00000463631 CLEC4FQ8N1N0 589 aa15.08■□□□□ 0
HMGN1-209ENST00000463631 ARFGAP2Q8N6H7 521 aa15.08■□□□□ 0
HMGN1-209ENST00000463631 POMGNT2Q8NAT1 580 aa15.08■□□□□ 0
HMGN1-209ENST00000463631 ZNF540Q8NDQ6 660 aa15.08■□□□□ 0
HMGN1-209ENST00000463631 OR8J2Q8NGG1 315 aa15.08■□□□□ 0
HMGN1-209ENST00000463631 AGR3Q8TD06 166 aa15.08■□□□□ 0
HMGN1-209ENST00000463631 EPS8L3Q8TE67 593 aaKnown RBP15.08■□□□□ 0
HMGN1-209ENST00000463631 PMM1Q92871 262 aa15.08■□□□□ 0
HMGN1-209ENST00000463631 ROPN1LQ96C74 230 aa15.08■□□□□ 0
HMGN1-209ENST00000463631 PIF1Q9H611 641 aa15.08■□□□□ 0
HMGN1-209ENST00000463631 MGAM2Q2M2H8 2515 aa15.07■□□□□ 0
HMGN1-209ENST00000463631 SMIM23A6NLE4 172 aa15.07■□□□□ 0
HMGN1-209ENST00000463631 FAAHO00519 579 aa15.07■□□□□ 0
HMGN1-209ENST00000463631 IMPDH2P12268 514 aa15.07■□□□□ 0
HMGN1-209ENST00000463631 KCNJ10P78508 379 aa15.07■□□□□ 0
HMGN1-209ENST00000463631 EFNB3Q15768 340 aa15.07■□□□□ 0
HMGN1-209ENST00000463631 SMU1Q2TAY7 513 aa15.07■□□□□ 0
HMGN1-209ENST00000463631 PGS1Q32NB8 556 aa15.07■□□□□ 0
HMGN1-209ENST00000463631 OR4F3Q6IEY1 312 aa15.07■□□□□ 0
HMGN1-209ENST00000463631 CMIPQ8IY22 773 aa15.07■□□□□ 0
HMGN1-209ENST00000463631 RFLNBQ8N5W9 214 aa15.07■□□□□ 0
HMGN1-209ENST00000463631 EIF1ADQ8N9N8 165 aaKnown RBP15.07■□□□□ 0
HMGN1-209ENST00000463631 DDIT4LQ96D03 193 aa15.07■□□□□ 0
HMGN1-209ENST00000463631 DNAJA3Q96EY1 480 aa15.07■□□□□ 0
HMGN1-209ENST00000463631 FOXN4Q96NZ1 517 aa15.07■□□□□ 0
HMGN1-209ENST00000463631 NAA11Q9BSU3 229 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms