RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 MED12Q93074 2177 aa12.68□□□□□ -0.38
VPS25-201ENST00000253794 SVILO95425 2214 aa12.68□□□□□ -0.38
VPS25-201ENST00000253794 RP1L1Q8IWN7 2480 aaPredicted RBP12.67□□□□□ -0.38
VPS25-201ENST00000253794 ZC3H12DA2A288 527 aaKnown RBP12.67□□□□□ -0.38
VPS25-201ENST00000253794 FIGNL2A6NMB9 653 aa12.67□□□□□ -0.38
VPS25-201ENST00000253794 FTCDNL1E5RQL4 147 aa12.67□□□□□ -0.38
VPS25-201ENST00000253794 PRRG2O14669 202 aa12.67□□□□□ -0.38
VPS25-201ENST00000253794 FKBP6O75344 327 aa12.67□□□□□ -0.38
VPS25-201ENST00000253794 PMS2P2O95744 297 aa12.67□□□□□ -0.38
VPS25-201ENST00000253794 H1F0P07305 194 aaKnown RBP12.67□□□□□ -0.38
VPS25-201ENST00000253794 LIMS1P48059 325 aa12.67□□□□□ -0.38
VPS25-201ENST00000253794 HMGA2P52926 109 aa12.67□□□□□ -0.38
VPS25-201ENST00000253794 SMIM11AP58511 58 aa12.67□□□□□ -0.38
VPS25-201ENST00000253794 RAC3P60763 192 aa12.67□□□□□ -0.38
VPS25-201ENST00000253794 RPS3AP61247 264 aaKnown RBP12.67□□□□□ -0.38
VPS25-201ENST00000253794 KPNB1Q14974 876 aaKnown RBP12.67□□□□□ -0.38
VPS25-201ENST00000253794 TRAM2Q15035 370 aa12.67□□□□□ -0.38
VPS25-201ENST00000253794 TMEM176BQ3YBM2 270 aaPredicted RBP12.67□□□□□ -0.38
VPS25-201ENST00000253794 PDSS1Q5T2R2 415 aa12.67□□□□□ -0.38
VPS25-201ENST00000253794 C1orf140Q5VVS0 124 aa12.67□□□□□ -0.38
VPS25-201ENST00000253794 POMZP3Q6PJE2 187 aa12.67□□□□□ -0.38
VPS25-201ENST00000253794 CD163Q86VB7 1156 aa12.67□□□□□ -0.38
VPS25-201ENST00000253794 DOLPP1Q86YN1 238 aa12.67□□□□□ -0.38
VPS25-201ENST00000253794 NKAIN4Q8IVV8 208 aa12.67□□□□□ -0.38
VPS25-201ENST00000253794 C10orf67Q8IYJ2 551 aa12.67□□□□□ -0.38
VPS25-201ENST00000253794 ACOT11Q8WXI4 607 aaPredicted RBP12.67□□□□□ -0.38
VPS25-201ENST00000253794 RSRC1Q96IZ7 334 aaKnown RBP12.67□□□□□ -0.38
VPS25-201ENST00000253794 ARL5BQ96KC2 179 aa12.67□□□□□ -0.38
VPS25-201ENST00000253794 PTDSS2Q9BVG9 487 aa12.67□□□□□ -0.38
VPS25-201ENST00000253794 OR11A1Q9GZK7 315 aa12.67□□□□□ -0.38
VPS25-201ENST00000253794 TP63Q9H3D4 680 aaPredicted RBP12.67□□□□□ -0.38
VPS25-201ENST00000253794 TMEM185BQ9H7F4 350 aa12.67□□□□□ -0.38
VPS25-201ENST00000253794 PNPLA3Q9NST1 481 aa12.67□□□□□ -0.38
VPS25-201ENST00000253794 TNFRSF10DQ9UBN6 386 aa12.67□□□□□ -0.38
VPS25-201ENST00000253794 ZNF175Q9Y473 711 aa12.67□□□□□ -0.38
VPS25-201ENST00000253794 NBASA2RRP1 2371 aa12.67□□□□□ -0.38
VPS25-201ENST00000253794 TRAV36DV7A0A075B6V5 113 aa12.66□□□□□ -0.38
VPS25-201ENST00000253794 ERICH4A6NGS2 130 aa12.66□□□□□ -0.38
VPS25-201ENST00000253794 CD8B2A6NJW9 211 aa12.66□□□□□ -0.38
VPS25-201ENST00000253794 H0YC42 278 aa12.66□□□□□ -0.38
VPS25-201ENST00000253794 EIF1AYO14602 144 aaKnown RBP12.66□□□□□ -0.38
VPS25-201ENST00000253794 KRT36O76013 467 aa12.66□□□□□ -0.38
VPS25-201ENST00000253794 DIRAS1O95057 198 aa12.66□□□□□ -0.38
VPS25-201ENST00000253794 TPOP07202 933 aa12.66□□□□□ -0.38
VPS25-201ENST00000253794 FUT4P22083 530 aa12.66□□□□□ -0.38
VPS25-201ENST00000253794 SFTPDP35247 375 aa12.66□□□□□ -0.38
VPS25-201ENST00000253794 CA7P43166 264 aa12.66□□□□□ -0.38
VPS25-201ENST00000253794 YAP1P46937 504 aaKnown RBP12.66□□□□□ -0.38
VPS25-201ENST00000253794 TPD52P55327 224 aaPredicted RBP12.66□□□□□ -0.38
VPS25-201ENST00000253794 MYBPHQ13203 477 aa12.66□□□□□ -0.38
VPS25-201ENST00000253794 ACSF3Q4G176 576 aaPredicted RBP12.66□□□□□ -0.38
VPS25-201ENST00000253794 HBMQ6B0K9 141 aa12.66□□□□□ -0.38
VPS25-201ENST00000253794 OR2T5Q6IEZ7 315 aa12.66□□□□□ -0.38
VPS25-201ENST00000253794 ATCAYQ86WG3 371 aa12.66□□□□□ -0.38
VPS25-201ENST00000253794 RNF113BQ8IZP6 322 aaKnown RBP12.66□□□□□ -0.38
VPS25-201ENST00000253794 OR2T29Q8NH02 315 aa12.66□□□□□ -0.38
VPS25-201ENST00000253794 OR10D3Q8NH80 312 aa12.66□□□□□ -0.38
VPS25-201ENST00000253794 MFSD8Q8NHS3 518 aa12.66□□□□□ -0.38
VPS25-201ENST00000253794 SLC7A13Q8TCU3 470 aa12.66□□□□□ -0.38
VPS25-201ENST00000253794 TMEM255BQ8WV15 326 aa12.66□□□□□ -0.38
VPS25-201ENST00000253794 TMEM239Q8WW34 195 aa12.66□□□□□ -0.38
VPS25-201ENST00000253794 CPNE4Q96A23 557 aaPredicted RBP12.66□□□□□ -0.38
VPS25-201ENST00000253794 EPYCQ99645 322 aa12.66□□□□□ -0.38
VPS25-201ENST00000253794 TUBA1CQ9BQE3 449 aa12.66□□□□□ -0.38
VPS25-201ENST00000253794 CALHM2Q9HA72 323 aa12.66□□□□□ -0.38
VPS25-201ENST00000253794 CLCF1Q9UBD9 225 aa12.66□□□□□ -0.38
VPS25-201ENST00000253794 AURKCQ9UQB9 309 aa12.66□□□□□ -0.38
VPS25-201ENST00000253794 CAMK2AQ9UQM7 478 aa12.66□□□□□ -0.38
VPS25-201ENST00000253794 UBR5O95071 2799 aaPredicted RBP12.65□□□□□ -0.38
VPS25-201ENST00000253794 LIPT2A6NK58 231 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 H0Y3Z8 333 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 TNFSF11O14788 317 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 ZNHIT1O43257 154 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 SEC14L5O43304 696 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 OR2T1O43869 369 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 AHSA1O95433 338 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 IMPDH2P12268 514 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 ACVR2AP27037 513 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 IDUAP35475 653 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 DIO1P49895 249 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 AGFG1P52594 562 aaKnown RBP12.65□□□□□ -0.38
VPS25-201ENST00000253794 UGT2B15P54855 530 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 CTBP2P56545 445 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 CARD18P57730 90 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 CSNK2A1P68400 391 aaPredicted RBP12.65□□□□□ -0.38
VPS25-201ENST00000253794 H3F3AP84243 136 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 MRPL49Q13405 166 aaKnown RBP12.65□□□□□ -0.38
VPS25-201ENST00000253794 C3AR1Q16581 482 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 ZNF239Q16600 458 aaKnown RBP12.65□□□□□ -0.38
VPS25-201ENST00000253794 FAM69AQ5T7M9 428 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 NSUN5P2Q63ZY6 315 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 RTL6Q6ICC9 239 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 ZFP1Q6P2D0 407 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 TTC33Q6PID6 262 aaPredicted RBP12.65□□□□□ -0.38
VPS25-201ENST00000253794 UBQLNLQ8IYU4 475 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 OR4C15Q8NGM1 316 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 OR5M9Q8NGP3 310 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 LIPHQ8WWY8 451 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 SMPDL3BQ92485 455 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 TAAR8Q969N4 342 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms