RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 CLEC9AQ6UXN8 241 aa14.07□□□□□ -0.16
CRLF3-203ENST00000578692 Q71RC1 249 aaPredicted RBP14.07□□□□□ -0.16
CRLF3-203ENST00000578692 GALNT5Q7Z7M9 940 aa14.07□□□□□ -0.16
CRLF3-203ENST00000578692 CMIPQ8IY22 773 aa14.07□□□□□ -0.16
CRLF3-203ENST00000578692 ZNF100Q8IYN0 542 aa14.07□□□□□ -0.16
CRLF3-203ENST00000578692 PNPT1Q8TCS8 783 aaKnown RBP14.07□□□□□ -0.16
CRLF3-203ENST00000578692 PMM1Q92871 262 aa14.07□□□□□ -0.16
CRLF3-203ENST00000578692 ZHX1-C8orf76Q96EF9 292 aa14.07□□□□□ -0.16
CRLF3-203ENST00000578692 MAELQ96JY0 434 aaKnown RBP14.07□□□□□ -0.16
CRLF3-203ENST00000578692 ARL5BQ96KC2 179 aa14.07□□□□□ -0.16
CRLF3-203ENST00000578692 ESRP2Q9H6T0 727 aaKnown RBP14.07□□□□□ -0.16
CRLF3-203ENST00000578692 HDGFL3Q9Y3E1 203 aa14.07□□□□□ -0.16
CRLF3-203ENST00000578692 MTORP42345 2549 aa14.06□□□□□ -0.16
CRLF3-203ENST00000578692 TMCC2O75069 709 aa14.06□□□□□ -0.16
CRLF3-203ENST00000578692 SLC22A3O75751 556 aa14.06□□□□□ -0.16
CRLF3-203ENST00000578692 LYZL6O75951 148 aa14.06□□□□□ -0.16
CRLF3-203ENST00000578692 CNOT4O95628 575 aaKnown RBP14.06□□□□□ -0.16
CRLF3-203ENST00000578692 KRT75O95678 551 aa14.06□□□□□ -0.16
CRLF3-203ENST00000578692 PMS2P2O95744 297 aa14.06□□□□□ -0.16
CRLF3-203ENST00000578692 CD3EP07766 207 aa14.06□□□□□ -0.16
CRLF3-203ENST00000578692 CHRM4P08173 479 aa14.06□□□□□ -0.16
CRLF3-203ENST00000578692 PAX1P15863 534 aa14.06□□□□□ -0.16
CRLF3-203ENST00000578692 CCNA2P20248 432 aa14.06□□□□□ -0.16
CRLF3-203ENST00000578692 EDNRAP25101 427 aa14.06□□□□□ -0.16
CRLF3-203ENST00000578692 HTR3AP46098 478 aa14.06□□□□□ -0.16
CRLF3-203ENST00000578692 LTBQ06643 244 aa14.06□□□□□ -0.16
CRLF3-203ENST00000578692 GNA13Q14344 377 aa14.06□□□□□ -0.16
CRLF3-203ENST00000578692 SLC9B1Q4ZJI4 515 aa14.06□□□□□ -0.16
CRLF3-203ENST00000578692 PDCD4Q53EL6 469 aaKnown RBP14.06□□□□□ -0.16
CRLF3-203ENST00000578692 ADAM5Q6NVV9 412 aa14.06□□□□□ -0.16
CRLF3-203ENST00000578692 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.06□□□□□ -0.16
CRLF3-203ENST00000578692 CIARTQ8N365 385 aaPredicted RBP14.06□□□□□ -0.16
CRLF3-203ENST00000578692 LILRB1Q8NHL6 650 aaPredicted RBP14.06□□□□□ -0.16
CRLF3-203ENST00000578692 PIWIL2Q8TC59 973 aaKnown RBP14.06□□□□□ -0.16
CRLF3-203ENST00000578692 DNAJA3Q96EY1 480 aa14.06□□□□□ -0.16
CRLF3-203ENST00000578692 POTEKPQ9BYX7 375 aa14.06□□□□□ -0.16
CRLF3-203ENST00000578692 CXorf56Q9H5V9 222 aa14.06□□□□□ -0.16
CRLF3-203ENST00000578692 TMBIM4Q9HC24 238 aa14.06□□□□□ -0.16
CRLF3-203ENST00000578692 EMC3Q9P0I2 261 aa14.06□□□□□ -0.16
CRLF3-203ENST00000578692 RNF115Q9Y4L5 304 aa14.06□□□□□ -0.16
CRLF3-203ENST00000578692 PRR14LQ5THK1 2151 aa14.06□□□□□ -0.16
CRLF3-203ENST00000578692 IGKV3D-15A0A087WSY6 115 aa14.05□□□□□ -0.16
CRLF3-203ENST00000578692 TMED7-TICAM2A0A0A6YYA0 188 aa14.05□□□□□ -0.16
CRLF3-203ENST00000578692 ZNF716A6NP11 495 aa14.05□□□□□ -0.16
CRLF3-203ENST00000578692 FAM171A2A8MVW0 826 aa14.05□□□□□ -0.16
CRLF3-203ENST00000578692 H7C1Q1 480 aa14.05□□□□□ -0.16
CRLF3-203ENST00000578692 AP3D1O14617 1153 aa14.05□□□□□ -0.16
CRLF3-203ENST00000578692 CLOCKO15516 846 aa14.05□□□□□ -0.16
CRLF3-203ENST00000578692 DNPH1O43598 174 aa14.05□□□□□ -0.16
CRLF3-203ENST00000578692 ERLIN1O75477 346 aa14.05□□□□□ -0.16
CRLF3-203ENST00000578692 DBIP07108 87 aaKnown RBP14.05□□□□□ -0.16
CRLF3-203ENST00000578692 IGHV1-2P23083 117 aa14.05□□□□□ -0.16
CRLF3-203ENST00000578692 GSTA3Q16772 222 aa14.05□□□□□ -0.16
CRLF3-203ENST00000578692 ABLIM2Q6H8Q1 611 aa14.05□□□□□ -0.16
CRLF3-203ENST00000578692 WDR60Q8WVS4 1066 aa14.05□□□□□ -0.16
CRLF3-203ENST00000578692 TLCD1Q96CP7 247 aa14.05□□□□□ -0.16
CRLF3-203ENST00000578692 COX4I2Q96KJ9 171 aa14.05□□□□□ -0.16
CRLF3-203ENST00000578692 OR11A1Q9GZK7 315 aa14.05□□□□□ -0.16
CRLF3-203ENST00000578692 SLC6A13Q9NSD5 602 aa14.05□□□□□ -0.16
CRLF3-203ENST00000578692 ZNF701Q9NV72 531 aaPredicted RBP14.05□□□□□ -0.16
CRLF3-203ENST00000578692 TMEM181Q9P2C4 612 aa14.05□□□□□ -0.16
CRLF3-203ENST00000578692 OSGIN1Q9UJX0 560 aa14.05□□□□□ -0.16
CRLF3-203ENST00000578692 LAMP3Q9UQV4 416 aa14.05□□□□□ -0.16
CRLF3-203ENST00000578692 TRAPPC4Q9Y296 219 aa14.05□□□□□ -0.16
CRLF3-203ENST00000578692 NOSIPQ9Y314 301 aaKnown RBP14.05□□□□□ -0.16
CRLF3-203ENST00000578692 TMED7Q9Y3B3 224 aa14.05□□□□□ -0.16
CRLF3-203ENST00000578692 ARID1AO14497 2285 aa14.05□□□□□ -0.16
CRLF3-203ENST00000578692 GPR171O14626 319 aa14.04□□□□□ -0.16
CRLF3-203ENST00000578692 ANP32DO95626 131 aa14.04□□□□□ -0.16
CRLF3-203ENST00000578692 ZCCHC18P0CG32 403 aa14.04□□□□□ -0.16
CRLF3-203ENST00000578692 RPS4Y1P22090 263 aaKnown RBP14.04□□□□□ -0.16
CRLF3-203ENST00000578692 TACR3P29371 465 aa14.04□□□□□ -0.16
CRLF3-203ENST00000578692 MAGEA8P43361 318 aa14.04□□□□□ -0.16
CRLF3-203ENST00000578692 POLR2HP52434 150 aaKnown RBP14.04□□□□□ -0.16
CRLF3-203ENST00000578692 OR2B6P58173 313 aa14.04□□□□□ -0.16
CRLF3-203ENST00000578692 PPA1Q15181 289 aa14.04□□□□□ -0.16
CRLF3-203ENST00000578692 STK11Q15831 433 aa14.04□□□□□ -0.16
CRLF3-203ENST00000578692 MRPL2Q5T653 305 aaKnown RBP14.04□□□□□ -0.16
CRLF3-203ENST00000578692 FBXW9Q5XUX1 488 aa14.04□□□□□ -0.16
CRLF3-203ENST00000578692 ATG4DQ86TL0 474 aaPredicted RBP14.04□□□□□ -0.16
CRLF3-203ENST00000578692 CCDC103Q8IW40 242 aa14.04□□□□□ -0.16
CRLF3-203ENST00000578692 PEX5LQ8IYB4 626 aa14.04□□□□□ -0.16
CRLF3-203ENST00000578692 UBE2J2Q8N2K1 259 aa14.04□□□□□ -0.16
CRLF3-203ENST00000578692 PIGXQ8TBF5 258 aa14.04□□□□□ -0.16
CRLF3-203ENST00000578692 FBXW5Q969U6 566 aa14.04□□□□□ -0.16
CRLF3-203ENST00000578692 DDIT4LQ96D03 193 aa14.04□□□□□ -0.16
CRLF3-203ENST00000578692 MUCL1Q96DR8 90 aa14.04□□□□□ -0.16
CRLF3-203ENST00000578692 ZIM2Q9NZV7 527 aa14.04□□□□□ -0.16
CRLF3-203ENST00000578692 NF1P21359 2839 aa14.03□□□□□ -0.16
CRLF3-203ENST00000578692 TMEM72A0PK05 275 aa14.03□□□□□ -0.16
CRLF3-203ENST00000578692 DPRXA6NFQ7 191 aa14.03□□□□□ -0.16
CRLF3-203ENST00000578692 CFAP73A6NFT4 308 aa14.03□□□□□ -0.16
CRLF3-203ENST00000578692 FAAHO00519 579 aa14.03□□□□□ -0.16
CRLF3-203ENST00000578692 SMAD7O15105 426 aaKnown RBP14.03□□□□□ -0.16
CRLF3-203ENST00000578692 UBDO15205 165 aa14.03□□□□□ -0.16
CRLF3-203ENST00000578692 ZNF208O43345 1280 aa14.03□□□□□ -0.16
CRLF3-203ENST00000578692 PGM3O95394 542 aa14.03□□□□□ -0.16
CRLF3-203ENST00000578692 LY6G6DO95868 133 aa14.03□□□□□ -0.16
CRLF3-203ENST00000578692 HEXAP06865 529 aa14.03□□□□□ -0.16
CRLF3-203ENST00000578692 GGT1P19440 569 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms