RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 SLC6A17Q9H1V8 727 aa16.56■□□□□ 0.24
PHF1-201ENST00000374512 SLCO1C1Q9NYB5 712 aa16.56■□□□□ 0.24
PHF1-201ENST00000374512 AKAP7Q9P0M2 348 aaPredicted RBP16.56■□□□□ 0.24
PHF1-201ENST00000374512 PCOLCE2Q9UKZ9 415 aa16.56■□□□□ 0.24
PHF1-201ENST00000374512 A0A1W2PQ72 361 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 LINC01565O15544 149 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 ZNF749O43361 778 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 SLC22A5O76082 557 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 TYRP1P17643 537 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 M6PRP20645 277 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 NT5EP21589 574 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 NTSR1P30989 418 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 SRP9P49458 86 aaKnown RBP16.55■□□□□ 0.24
PHF1-201ENST00000374512 AP2S1P53680 142 aaPredicted RBP16.55■□□□□ 0.24
PHF1-201ENST00000374512 GGTLC2Q14390 218 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 FAM209AQ5JX71 171 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 SIGIRRQ6IA17 410 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 OR5J2Q8NH18 312 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 RSC1A1Q92681 617 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 TRIM2Q9C040 744 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 CDH23Q9H251 3354 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 MYO9BQ13459 2157 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 LEUTXA8MZ59 168 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.55■□□□□ 0.24
PHF1-201ENST00000374512 PPP1R3DO95685 299 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 GPR75O95800 540 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 EML2O95834 649 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 RAF1P04049 648 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 H2AFB2P0C5Z0 115 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 GIFP27352 417 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 KIAA1024LP59773 190 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 PPP2CBP62714 309 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 PPP2CAP67775 309 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 CDK5R1Q15078 307 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 ZSWIM7Q19AV6 140 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 GSG1Q2KHT4 349 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 TMEM196Q5HYL7 178 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 RPL22L1Q6P5R6 122 aaKnown RBP16.55■□□□□ 0.24
PHF1-201ENST00000374512 OR51A7Q8NH64 312 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 FLVCR1-AS1Q8TAF5 88 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 NKX2-4Q9H2Z4 354 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 AUP1Q9Y679 476 aa16.55■□□□□ 0.24
PHF1-201ENST00000374512 TRAV27A0A087WT01 109 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 MEIKINA0A087WXM9 373 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 POM121BA6NF01 834 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 EPOPA6NHQ4 379 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 SHOXO15266 292 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 SULT1A3P0DMM9 295 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 SULT1A4P0DMN0 295 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 ATF1P18846 271 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 AK4P27144 223 aaPredicted RBP16.54■□□□□ 0.24
PHF1-201ENST00000374512 SNTB2Q13425 540 aaKnown RBP16.54■□□□□ 0.24
PHF1-201ENST00000374512 FAM69AQ5T7M9 428 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 ENPP7Q6UWV6 458 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 SLITRK4Q8IW52 837 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 RPLP0P6Q8NHW5 317 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 ZCCHC10Q8TBK6 192 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 SUN5Q8TC36 379 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 SMIM4Q8WVI0 70 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 A0A1B0GVC2 190 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 A6NIN4 97 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 GPRIN2O60269 458 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 CD3GP09693 182 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 GDI2P50395 445 aaKnown RBP16.54■□□□□ 0.24
PHF1-201ENST00000374512 SIRPAP78324 504 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 PRICKLE4Q2TBC4 344 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 CDONQ4KMG0 1287 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 UBE2NLQ5JXB2 153 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 MANEAQ5SRI9 462 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 RPTNQ6XPR3 784 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 DGLUCYQ7Z3D6 616 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 DTX3Q8N9I9 347 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 FAM98AQ8NCA5 519 aaKnown RBP16.54■□□□□ 0.24
PHF1-201ENST00000374512 ZNF680Q8NEM1 530 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 ASB12Q8WXK4 309 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 OR1E3Q8WZA6 343 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 HOXB13Q92826 284 aaPredicted RBP16.54■□□□□ 0.24
PHF1-201ENST00000374512 CNN2Q99439 309 aaKnown RBP16.54■□□□□ 0.24
PHF1-201ENST00000374512 GABRG3Q99928 467 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 RPP25Q9BUL9 199 aaKnown RBP16.54■□□□□ 0.24
PHF1-201ENST00000374512 FBRSQ9HAH7 460 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 IL21RQ9HBE5 538 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 BRD7Q9NPI1 651 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 FBXO34Q9NWN3 711 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 PILRAQ9UKJ1 303 aa16.54■□□□□ 0.24
PHF1-201ENST00000374512 TRABD2BA6NFA1 517 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 LRRC72A6NJI9 287 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 ZNF879B4DU55 563 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 P2RX6O15547 441 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 CLUP10909 449 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 DGCR2P98153 550 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 HSF2Q03933 536 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 LGALS3BPQ08380 585 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 KLF9Q13886 244 aaPredicted RBP16.53■□□□□ 0.24
PHF1-201ENST00000374512 TCEA2Q15560 299 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 EID2Q8N6I1 236 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 LSMEM1Q8N8F7 131 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 CYB561A3Q8NBI2 242 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 ZFP3Q96NJ6 502 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 SORCS2Q96PQ0 1159 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms