RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 CNOT9Q92600 299 aaKnown RBP15.73■□□□□ 0.11
HDDC3-201ENST00000330334 ZHX1-C8orf76Q96EF9 292 aa15.73■□□□□ 0.11
HDDC3-201ENST00000330334 POM121Q96HA1 1249 aa15.73■□□□□ 0.11
HDDC3-201ENST00000330334 POTEKPQ9BYX7 375 aa15.73■□□□□ 0.11
HDDC3-201ENST00000330334 GSX1Q9H4S2 264 aaPredicted RBP15.73■□□□□ 0.11
HDDC3-201ENST00000330334 EMC3Q9P0I2 261 aa15.73■□□□□ 0.11
HDDC3-201ENST00000330334 FREM1Q5H8C1 2179 aa15.73■□□□□ 0.11
HDDC3-201ENST00000330334 RAI1Q7Z5J4 1906 aaPredicted RBP15.72■□□□□ 0.11
HDDC3-201ENST00000330334 PRR14LQ5THK1 2151 aa15.72■□□□□ 0.11
HDDC3-201ENST00000330334 CLDN24A6NM45 220 aa15.72■□□□□ 0.11
HDDC3-201ENST00000330334 FAM171A2A8MVW0 826 aa15.72■□□□□ 0.11
HDDC3-201ENST00000330334 C9JVG2 144 aa15.72■□□□□ 0.11
HDDC3-201ENST00000330334 ZNF208O43345 1280 aa15.72■□□□□ 0.11
HDDC3-201ENST00000330334 DIAPH2O60879 1101 aa15.72■□□□□ 0.11
HDDC3-201ENST00000330334 ADAM11O75078 769 aa15.72■□□□□ 0.11
HDDC3-201ENST00000330334 DBIP07108 87 aaKnown RBP15.72■□□□□ 0.11
HDDC3-201ENST00000330334 FESP07332 822 aa15.72■□□□□ 0.11
HDDC3-201ENST00000330334 INHBBP09529 407 aa15.72■□□□□ 0.11
HDDC3-201ENST00000330334 NR2F1P10589 423 aa15.72■□□□□ 0.11
HDDC3-201ENST00000330334 IDH2P48735 452 aaKnown RBP15.72■□□□□ 0.11
HDDC3-201ENST00000330334 MVDP53602 400 aa15.72■□□□□ 0.11
HDDC3-201ENST00000330334 SLC16A1P53985 500 aa15.72■□□□□ 0.11
HDDC3-201ENST00000330334 H3F3AP84243 136 aa15.72■□□□□ 0.11
HDDC3-201ENST00000330334 SLC9B1Q4ZJI4 515 aa15.72■□□□□ 0.11
HDDC3-201ENST00000330334 COX20Q5RI15 118 aa15.72■□□□□ 0.11
HDDC3-201ENST00000330334 NCMAPQ5T1S8 102 aa15.72■□□□□ 0.11
HDDC3-201ENST00000330334 NXNQ6DKJ4 435 aa15.72■□□□□ 0.11
HDDC3-201ENST00000330334 DNAJC14Q6Y2X3 702 aaPredicted RBP15.72■□□□□ 0.11
HDDC3-201ENST00000330334 P2RY8Q86VZ1 359 aa15.72■□□□□ 0.11
HDDC3-201ENST00000330334 ESRP2Q9H6T0 727 aaKnown RBP15.72■□□□□ 0.11
HDDC3-201ENST00000330334 ZNF701Q9NV72 531 aaPredicted RBP15.72■□□□□ 0.11
HDDC3-201ENST00000330334 DSCAMO60469 2012 aa15.72■□□□□ 0.11
HDDC3-201ENST00000330334 ZNF716A6NP11 495 aa15.71■□□□□ 0.11
HDDC3-201ENST00000330334 GPR171O14626 319 aa15.71■□□□□ 0.11
HDDC3-201ENST00000330334 PGM3O95394 542 aa15.71■□□□□ 0.11
HDDC3-201ENST00000330334 PLAUP00749 431 aa15.71■□□□□ 0.11
HDDC3-201ENST00000330334 GSNP06396 782 aa15.71■□□□□ 0.11
HDDC3-201ENST00000330334 TFPIP10646 304 aa15.71■□□□□ 0.11
HDDC3-201ENST00000330334 UQCRBP14927 111 aa15.71■□□□□ 0.11
HDDC3-201ENST00000330334 IL7RP16871 459 aa15.71■□□□□ 0.11
HDDC3-201ENST00000330334 COX5AP20674 150 aa15.71■□□□□ 0.11
HDDC3-201ENST00000330334 SLC1A3P43003 542 aa15.71■□□□□ 0.11
HDDC3-201ENST00000330334 POLR2HP52434 150 aaKnown RBP15.71■□□□□ 0.11
HDDC3-201ENST00000330334 ZSWIM7Q19AV6 140 aa15.71■□□□□ 0.11
HDDC3-201ENST00000330334 BHLHA15Q7RTS1 189 aaPredicted RBP15.71■□□□□ 0.11
HDDC3-201ENST00000330334 MAVSQ7Z434 540 aa15.71■□□□□ 0.11
HDDC3-201ENST00000330334 PEX5LQ8IYB4 626 aa15.71■□□□□ 0.11
HDDC3-201ENST00000330334 ZNF440Q8IYI8 595 aa15.71■□□□□ 0.11
HDDC3-201ENST00000330334 PIGXQ8TBF5 258 aa15.71■□□□□ 0.11
HDDC3-201ENST00000330334 TMEM171Q8WVE6 324 aa15.71■□□□□ 0.11
HDDC3-201ENST00000330334 ARL5BQ96KC2 179 aa15.71■□□□□ 0.11
HDDC3-201ENST00000330334 ZNF300Q96RE9 604 aaPredicted RBP15.71■□□□□ 0.11
HDDC3-201ENST00000330334 BDH2Q9BUT1 245 aa15.71■□□□□ 0.11
HDDC3-201ENST00000330334 CXorf56Q9H5V9 222 aa15.71■□□□□ 0.11
HDDC3-201ENST00000330334 RMND5AQ9H871 391 aa15.71■□□□□ 0.11
HDDC3-201ENST00000330334 THUMPD1Q9NXG2 353 aaKnown RBP15.71■□□□□ 0.11
HDDC3-201ENST00000330334 CALML5Q9NZT1 146 aa15.71■□□□□ 0.11
HDDC3-201ENST00000330334 TMEM181Q9P2C4 612 aa15.71■□□□□ 0.11
HDDC3-201ENST00000330334 NAV3Q8IVL0 2385 aa15.7■□□□□ 0.1
HDDC3-201ENST00000330334 CFAP73A6NFT4 308 aa15.7■□□□□ 0.1
HDDC3-201ENST00000330334 UBDO15205 165 aa15.7■□□□□ 0.1
HDDC3-201ENST00000330334 EIF1BO60739 113 aaKnown RBP15.7■□□□□ 0.1
HDDC3-201ENST00000330334 TFPTP0C1Z6 253 aa15.7■□□□□ 0.1
HDDC3-201ENST00000330334 HOXB4P17483 251 aaPredicted RBP15.7■□□□□ 0.1
HDDC3-201ENST00000330334 MRPL19P49406 292 aaKnown RBP15.7■□□□□ 0.1
HDDC3-201ENST00000330334 TSC22D1Q15714 1073 aa15.7■□□□□ 0.1
HDDC3-201ENST00000330334 MAPK11Q15759 364 aa15.7■□□□□ 0.1
HDDC3-201ENST00000330334 TIMM23BQ5SRD1 257 aa15.7■□□□□ 0.1
HDDC3-201ENST00000330334 FBXW9Q5XUX1 488 aa15.7■□□□□ 0.1
HDDC3-201ENST00000330334 SEZ6L2Q6UXD5 910 aa15.7■□□□□ 0.1
HDDC3-201ENST00000330334 YTHDF3Q7Z739 585 aaKnown RBP15.7■□□□□ 0.1
HDDC3-201ENST00000330334 ZNF100Q8IYN0 542 aa15.7■□□□□ 0.1
HDDC3-201ENST00000330334 WDR60Q8WVS4 1066 aa15.7■□□□□ 0.1
HDDC3-201ENST00000330334 AKAP1Q92667 903 aaKnown RBP eCLIP15.7■□□□□ 0.1
HDDC3-201ENST00000330334 DDIT4LQ96D03 193 aa15.7■□□□□ 0.1
HDDC3-201ENST00000330334 ITCHQ96J02 903 aa15.7■□□□□ 0.1
HDDC3-201ENST00000330334 ADAM19Q9H013 955 aa15.7■□□□□ 0.1
HDDC3-201ENST00000330334 TPT1P8Q9HAU6 139 aa15.7■□□□□ 0.1
HDDC3-201ENST00000330334 SLC6A13Q9NSD5 602 aa15.7■□□□□ 0.1
HDDC3-201ENST00000330334 P2RX2Q9UBL9 471 aa15.7■□□□□ 0.1
HDDC3-201ENST00000330334 PRSS50Q9UI38 385 aa15.7■□□□□ 0.1
HDDC3-201ENST00000330334 OSGIN1Q9UJX0 560 aa15.7■□□□□ 0.1
HDDC3-201ENST00000330334 RNF115Q9Y4L5 304 aa15.7■□□□□ 0.1
HDDC3-201ENST00000330334 NSD1Q96L73 2696 aaPredicted RBP15.7■□□□□ 0.1
HDDC3-201ENST00000330334 DSPPQ9NZW4 1301 aa15.69■□□□□ 0.1
HDDC3-201ENST00000330334 TMED7-TICAM2A0A0A6YYA0 188 aa15.69■□□□□ 0.1
HDDC3-201ENST00000330334 CDHR4A6H8M9 788 aa15.69■□□□□ 0.1
HDDC3-201ENST00000330334 AP3D1O14617 1153 aa15.69■□□□□ 0.1
HDDC3-201ENST00000330334 TGDSO95455 350 aa15.69■□□□□ 0.1
HDDC3-201ENST00000330334 CD3EP07766 207 aa15.69■□□□□ 0.1
HDDC3-201ENST00000330334 IGHV1-2P23083 117 aa15.69■□□□□ 0.1
HDDC3-201ENST00000330334 ADSLP30566 484 aaPredicted RBP15.69■□□□□ 0.1
HDDC3-201ENST00000330334 PTH2RP49190 550 aa15.69■□□□□ 0.1
HDDC3-201ENST00000330334 POLR2JP52435 117 aaKnown RBP15.69■□□□□ 0.1
HDDC3-201ENST00000330334 SLC35A1P78382 337 aa15.69■□□□□ 0.1
HDDC3-201ENST00000330334 EPS8Q12929 822 aa15.69■□□□□ 0.1
HDDC3-201ENST00000330334 MRPL2Q5T653 305 aaKnown RBP15.69■□□□□ 0.1
HDDC3-201ENST00000330334 AGBL2Q5U5Z8 902 aa15.69■□□□□ 0.1
HDDC3-201ENST00000330334 HMGN2P46Q86SG4 172 aa15.69■□□□□ 0.1
HDDC3-201ENST00000330334 LILRB1Q8NHL6 650 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms