RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 TMEM80Q96HE8 168 aa1.84□□□□□ -2.11
LMNB1-207ENST00000494185 CFAP53Q96M91 514 aa1.84□□□□□ -2.11
LMNB1-207ENST00000494185 C9orf85Q96MD7 179 aa1.84□□□□□ -2.11
LMNB1-207ENST00000494185 SLC38A2Q96QD8 506 aa1.84□□□□□ -2.11
LMNB1-207ENST00000494185 CHP1Q99653 195 aa1.84□□□□□ -2.11
LMNB1-207ENST00000494185 SLC35A5Q9BS91 424 aa1.84□□□□□ -2.11
LMNB1-207ENST00000494185 NXF5Q9H1B4 397 aaKnown RBP1.84□□□□□ -2.11
LMNB1-207ENST00000494185 FANCEQ9HB96 536 aa1.84□□□□□ -2.11
LMNB1-207ENST00000494185 NEK6Q9HC98 313 aa1.84□□□□□ -2.11
LMNB1-207ENST00000494185 EXOSC3Q9NQT5 275 aaKnown RBP1.84□□□□□ -2.11
LMNB1-207ENST00000494185 SLC17A5Q9NRA2 495 aa1.84□□□□□ -2.11
LMNB1-207ENST00000494185 ELOVL2Q9NXB9 296 aa1.84□□□□□ -2.11
LMNB1-207ENST00000494185 IL36GQ9NZH8 169 aa1.84□□□□□ -2.11
LMNB1-207ENST00000494185 WRAP73Q9P2S5 460 aaPredicted RBP1.84□□□□□ -2.11
LMNB1-207ENST00000494185 RSPH14Q9UHP6 348 aa1.84□□□□□ -2.11
LMNB1-207ENST00000494185 LCMT1Q9UIC8 334 aa1.84□□□□□ -2.11
LMNB1-207ENST00000494185 MEMO1Q9Y316 297 aa1.84□□□□□ -2.11
LMNB1-207ENST00000494185 AK6Q9Y3D8 172 aaKnown RBP1.84□□□□□ -2.11
LMNB1-207ENST00000494185 TTC41PQ6P2S7 1318 aa1.84□□□□□ -2.12
LMNB1-207ENST00000494185 ATP10AO60312 1499 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 AGRNO00468 2067 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 ZNF840PA6NDX5 716 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 CCDC182A6NF36 153 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 PP2D1A8MPX8 630 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 SRRM5B3KS81 715 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 C9JVG2 144 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 GOLGA8SH3BPF8 625 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 K7ERI5 159 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 HAS3O00219 553 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 WRBO00258 174 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 TNFSF11O14788 317 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 POLR2DO15514 142 aaKnown RBP1.83□□□□□ -2.12
LMNB1-207ENST00000494185 RS1O15537 224 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 PHF1O43189 567 aaPredicted RBP1.83□□□□□ -2.12
LMNB1-207ENST00000494185 RAMP3O60896 148 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 SLITRK3O94933 977 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 SEMA4FO95754 770 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 CA1P00915 261 aaPredicted RBP1.83□□□□□ -2.12
LMNB1-207ENST00000494185 CST1P01037 141 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 MCF2P10911 925 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 ETS2P15036 469 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 NMT1P30419 496 aaKnown RBP1.83□□□□□ -2.12
LMNB1-207ENST00000494185 YWHABP31946 246 aaKnown RBP1.83□□□□□ -2.12
LMNB1-207ENST00000494185 MAP3K8P41279 467 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 SYKP43405 635 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 GYG1P46976 350 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 HNRNPA3P51991 378 aaKnown RBP1.83□□□□□ -2.12
LMNB1-207ENST00000494185 ATP1B3P54709 279 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 LYZP61626 148 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 RPL8P62917 257 aaKnown RBP1.83□□□□□ -2.12
LMNB1-207ENST00000494185 SPAG1Q07617 926 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 TGM3Q08188 693 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 DPYSL3Q14195 570 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 PPP1R7Q15435 360 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 PPP1R3AQ16821 1122 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 MICAQ29983 383 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 C17orf58Q2M2W7 97 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 KLHL38Q2WGJ6 581 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 TIGITQ495A1 244 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 MS4A13Q5J8X5 152 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 LIPNQ5VXI9 398 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 LEMD1Q68G75 181 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 KCNIP4Q6PIL6 250 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 REG3GQ6UW15 175 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 TMEM107Q6UX40 140 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 C2orf66Q6UXQ4 117 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 DHDDSQ86SQ9 333 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 SERPINA9Q86WD7 417 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 TRIM69Q86WT6 500 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 LINC01561Q8N1V8 128 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 COMMD1Q8N668 190 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 ALLCQ8N6M5 410 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 FAM184AQ8NB25 1140 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 OR4D9Q8NGE8 314 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 OR9A4Q8NGU2 314 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 CNIH3Q8TBE1 160 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 SLC22A8Q8TCC7 542 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 ITLN1Q8WWA0 313 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 ST8SIA1Q92185 356 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 MRPS31Q92665 395 aaKnown RBP1.83□□□□□ -2.12
LMNB1-207ENST00000494185 OR5M11Q96RB7 305 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 TGS1Q96RS0 853 aaKnown RBP1.83□□□□□ -2.12
LMNB1-207ENST00000494185 C11orf70Q9BRQ4 267 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 TSSK1BQ9BXA7 367 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 SPATA16Q9BXB7 569 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 ILKAPQ9H0C8 392 aaPredicted RBP1.83□□□□□ -2.12
LMNB1-207ENST00000494185 SLITRK2Q9H156 845 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 ZBP1Q9H171 429 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 PPDPFQ9H3Y8 114 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 CHMP4BQ9H444 224 aaKnown RBP1.83□□□□□ -2.12
LMNB1-207ENST00000494185 GLIPR2Q9H4G4 154 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 RNF41Q9H4P4 317 aaPredicted RBP1.83□□□□□ -2.12
LMNB1-207ENST00000494185 ANKRD19PQ9H560 264 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 AZI2Q9H6S1 392 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 SMYD3Q9H7B4 428 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 AUNIPQ9H7T9 357 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 VCPKMTQ9H867 229 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 NT5MQ9NPB1 228 aa1.83□□□□□ -2.12
LMNB1-207ENST00000494185 MEPEQ9NQ76 525 aaPredicted RBP1.83□□□□□ -2.12
LMNB1-207ENST00000494185 TIGARQ9NQ88 270 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms