RNA–Protein interactions for RNA: ENST00000487445.6

GCA-210, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 1,808 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-210ENST00000487445 CXCR1P25024 350 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 POLR2IP36954 125 aaKnown RBP13.18□□□□□ -0.3
GCA-210ENST00000487445 GPR4P46093 362 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 MERTKQ12866 999 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 NHSL2Q5HYW2 709 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 ATG4DQ86TL0 474 aaPredicted RBP13.18□□□□□ -0.3
GCA-210ENST00000487445 DHRSXQ8N5I4 330 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 TMEM234Q8WY98 164 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 HS6ST2Q96MM7 605 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 GPA33Q99795 319 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 ADI1Q9BV57 179 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 HES7Q9BYE0 225 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 ADAM19Q9H013 955 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 KRCC1Q9NPI7 259 aaPredicted RBP13.18□□□□□ -0.3
GCA-210ENST00000487445 DEPPQ9NTK1 212 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 MED17Q9NVC6 651 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 DKK4Q9UBT3 224 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 OSGIN1Q9UJX0 560 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 C15orf41Q9Y2V0 281 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 RAXQ9Y2V3 346 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 AP4B1Q9Y6B7 739 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 CEP295Q9C0D2 2601 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 SHISA8B8ZZ34 492 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 SNPHO15079 494 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 ADAP00813 363 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 PRKCAP17252 672 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 CNR1P21554 472 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 OMPP47874 163 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 CRYZQ08257 329 aaKnown RBP13.18□□□□□ -0.3
GCA-210ENST00000487445 TOMM20Q15388 145 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 BROXQ5VW32 411 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 TIGD3Q6B0B8 471 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 C1orf94Q6P1W5 598 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 LINC00114Q6XXX2 140 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 GRINAQ7Z429 371 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 CDK20Q8IZL9 346 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 RNF113BQ8IZP6 322 aaKnown RBP13.18□□□□□ -0.3
GCA-210ENST00000487445 GATA6Q92908 595 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 NPAS1Q99742 590 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 PSD2Q9BQI7 771 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 UCK2Q9BZX2 261 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 HHATLQ9HCP6 504 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 MEPEQ9NQ76 525 aaPredicted RBP13.18□□□□□ -0.3
GCA-210ENST00000487445 C20orf141Q9NUB4 165 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 POFUT2Q9Y2G5 429 aa13.18□□□□□ -0.3
GCA-210ENST00000487445 FAM47E-STBD1D6RA91 191 aa13.17□□□□□ -0.3
GCA-210ENST00000487445 CDH2P19022 906 aaPredicted RBP13.17□□□□□ -0.3
GCA-210ENST00000487445 POU1F1P28069 291 aa13.17□□□□□ -0.3
GCA-210ENST00000487445 RBM34P42696 430 aaKnown RBP13.17□□□□□ -0.3
GCA-210ENST00000487445 POLR2HP52434 150 aaKnown RBP13.17□□□□□ -0.3
GCA-210ENST00000487445 TLE3Q04726 772 aa13.17□□□□□ -0.3
GCA-210ENST00000487445 RFX4Q33E94 735 aa13.17□□□□□ -0.3
GCA-210ENST00000487445 KLHL17Q6TDP4 642 aa13.17□□□□□ -0.3
GCA-210ENST00000487445 LRRC69Q6ZNQ3 347 aa13.17□□□□□ -0.3
GCA-210ENST00000487445 FADS6Q8N9I5 356 aa13.17□□□□□ -0.3
GCA-210ENST00000487445 OR5M1Q8NGP8 315 aa13.17□□□□□ -0.3
GCA-210ENST00000487445 GNPDA2Q8TDQ7 276 aa13.17□□□□□ -0.3
GCA-210ENST00000487445 ST8SIA1Q92185 356 aa13.17□□□□□ -0.3
GCA-210ENST00000487445 SLC39A7Q92504 469 aa13.17□□□□□ -0.3
GCA-210ENST00000487445 HAS2Q92819 552 aa13.17□□□□□ -0.3
GCA-210ENST00000487445 BPIFA2Q96DR5 249 aa13.17□□□□□ -0.3
GCA-210ENST00000487445 DNAJA3Q96EY1 480 aa13.17□□□□□ -0.3
GCA-210ENST00000487445 TMEM41AQ96HV5 264 aa13.17□□□□□ -0.3
GCA-210ENST00000487445 RDH12Q96NR8 316 aa13.17□□□□□ -0.3
GCA-210ENST00000487445 MBOAT4Q96T53 435 aa13.17□□□□□ -0.3
GCA-210ENST00000487445 DGCR6LQ9BY27 220 aa13.17□□□□□ -0.3
GCA-210ENST00000487445 PRDM4Q9UKN5 801 aa13.17□□□□□ -0.3
GCA-210ENST00000487445 RPH3AQ9Y2J0 694 aaPredicted RBP13.17□□□□□ -0.3
GCA-210ENST00000487445 LAMA5O15230 3695 aa13.16□□□□□ -0.3
GCA-210ENST00000487445 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.16□□□□□ -0.3
GCA-210ENST00000487445 TMED7-TICAM2A0A0A6YYA0 188 aa13.16□□□□□ -0.3
GCA-210ENST00000487445 TRIM3O75382 744 aaPredicted RBP13.16□□□□□ -0.3
GCA-210ENST00000487445 SOX14O95416 240 aa13.16□□□□□ -0.3
GCA-210ENST00000487445 CLIC3O95833 236 aa13.16□□□□□ -0.3
GCA-210ENST00000487445 DPP4P27487 766 aa13.16□□□□□ -0.3
GCA-210ENST00000487445 FOXF1Q12946 379 aa13.16□□□□□ -0.3
GCA-210ENST00000487445 WLSQ5T9L3 541 aa13.16□□□□□ -0.3
GCA-210ENST00000487445 SLC25A25Q6KCM7 469 aa13.16□□□□□ -0.3
GCA-210ENST00000487445 GALNTL5Q7Z4T8 443 aa13.16□□□□□ -0.3
GCA-210ENST00000487445 SULF2Q8IWU5 870 aa13.16□□□□□ -0.3
GCA-210ENST00000487445 ZNF555Q8NEP9 628 aa13.16□□□□□ -0.3
GCA-210ENST00000487445 ATP6V1C2Q8NEY4 427 aa13.16□□□□□ -0.3
GCA-210ENST00000487445 TFAP2CQ92754 450 aa13.16□□□□□ -0.3
GCA-210ENST00000487445 C1GALT1C1Q96EU7 318 aa13.16□□□□□ -0.3
GCA-210ENST00000487445 C5orf34Q96MH7 638 aa13.16□□□□□ -0.3
GCA-210ENST00000487445 ZNF426Q9BUY5 554 aa13.16□□□□□ -0.3
GCA-210ENST00000487445 Q9H521 79 aa13.16□□□□□ -0.3
GCA-210ENST00000487445 FAM118AQ9NWS6 357 aa13.16□□□□□ -0.3
GCA-210ENST00000487445 TUBA8Q9NY65 449 aaPredicted RBP13.16□□□□□ -0.3
GCA-210ENST00000487445 RAB26Q9ULW5 256 aa13.16□□□□□ -0.3
GCA-210ENST00000487445 SSUH2Q9Y2M2 353 aa13.16□□□□□ -0.3
GCA-210ENST00000487445 TMED7Q9Y3B3 224 aa13.16□□□□□ -0.3
GCA-210ENST00000487445 CFAP47Q6ZTR5 3102 aa13.16□□□□□ -0.3
GCA-210ENST00000487445 PINLYPA6NC86 204 aa13.16□□□□□ -0.3
GCA-210ENST00000487445 ENO4A6NNW6 628 aa13.16□□□□□ -0.3
GCA-210ENST00000487445 H3BN98 237 aa13.16□□□□□ -0.3
GCA-210ENST00000487445 CBR3O75828 277 aa13.16□□□□□ -0.3
GCA-210ENST00000487445 SP1P08047 785 aa13.16□□□□□ -0.3
GCA-210ENST00000487445 SAGP10523 405 aaPredicted RBP13.16□□□□□ -0.3
GCA-210ENST00000487445 CD46P15529 392 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms