RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 Q8N9G6 341 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 ACOT4Q8N9L9 421 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 CLEC18CQ8NCF0 446 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 C11orf65Q8NCR3 313 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 OR6C4Q8NGE1 309 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 OR5AK3PQ8NH89 298 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 FLVCR1-AS1Q8TAF5 88 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 SFXN5Q8TD22 340 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 UTP15Q8TED0 518 aaKnown RBP3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZFP90Q8TF47 636 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 CANT1Q8WVQ1 401 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 DNAJC9Q8WXX5 260 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 OR5P2Q8WZ92 322 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 NCSTNQ92542 709 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 MOAP1Q96BY2 351 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 TM4SF18Q96CE8 201 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 SLC47A1Q96FL8 570 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 RNF145Q96MT1 663 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 OR2A5Q96R48 311 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 SEPHS2Q99611 448 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 MAP3K3Q99759 626 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZNF717Q9BY31 904 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 KLHL4Q9C0H6 718 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 SLC7A5P2Q9GIP4 190 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 Q9H521 79 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 IKZF5Q9H5V7 419 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 KAT8Q9H7Z6 458 aaKnown RBP3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 FANCEQ9HB96 536 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 C3orf14Q9HBI5 128 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 PDE7BQ9NP56 450 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 LHX9Q9NQ69 397 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 SLC35C2Q9NQQ7 365 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 SLC6A13Q9NSD5 602 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZCCHC3Q9NUD5 404 aaKnown RBP3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 ADPRHL2Q9NX46 363 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 TEX10Q9NXF1 929 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 MS4A12Q9NXJ0 267 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 NLGN3Q9NZ94 848 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 C5AR2Q9P296 337 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 TRPC4Q9UBN4 977 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 GMEB2Q9UKD1 530 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 PILRBQ9UKJ0 227 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 PSME2Q9UL46 239 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 RAB23Q9ULC3 237 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 FAF1Q9UNN5 650 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 MRPS33Q9Y291 106 aaKnown RBP3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 NEUROG3Q9Y4Z2 214 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 RNF215Q9Y6U7 377 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 PCDH15Q96QU1 1955 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 REV3LO60673 3130 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 SPAG17Q6Q759 2223 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 IGHV1OR21-1A0A087WYE8 117 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 CPED1A4D0V7 1026 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 FAM90A20PA6NIJ5 464 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 GLOD5A6NK44 160 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 A8MU76 341 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 TMEM150CB9EJG8 249 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 C4orf51C9J302 202 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 CASQ2O14958 399 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 OR10H2O60403 315 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 SRPX2O60687 465 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 GALR3O60755 368 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 SCN2BO60939 215 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 RDH16O75452 317 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 E2F6O75461 281 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 CREG1O75629 220 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 TBX6O95947 436 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 LDLRP01130 860 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 IFNA14P01570 189 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 C9P02748 559 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 MT-ND1P03886 318 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 BCHEP06276 602 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 RETP07949 1114 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 TDGF1P13385 188 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 ETFAP13804 333 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 ACADSP16219 412 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZNF23P17027 643 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 GPX2P18283 190 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 CSNK2A2P19784 350 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 NT5EP21589 574 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 PTPN6P29350 595 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 AQP1P29972 269 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 MPIP34949 423 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 RXRGP48443 463 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 CDK9P50750 372 aaKnown RBP3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 DUSP3P51452 185 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 CASP9P55211 416 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 LIM2P55344 173 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 RAB38P57729 211 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 OR1D5P58170 312 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 RBBP4Q09028 425 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 SCARB2Q14108 478 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 VEZF1Q14119 521 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 IL13RA2Q14627 380 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 RGNQ15493 299 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 LPAL2Q16609 132 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZNF630Q2M218 657 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 HLA-BQ31612 363 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 FAM76BQ5HYJ3 339 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 TCTE1Q5JU00 501 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms