RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 HCAR1Q9BXC0 346 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.28□□□□□ -0.6
UBR4-205ENST00000417040 HEBP1Q9NRV9 189 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 C1GALT1Q9NS00 363 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 INSL6Q9Y581 213 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 PCDHGA1Q9Y5H4 931 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 PEX12O00623 359 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 RDH16O75452 317 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 TRNP1Q6NT89 227 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 PXT1Q8NFP0 134 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 HPSE2Q8WWQ2 592 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 SNX18Q96RF0 628 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 INTS14Q96SY0 518 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 FKRPQ9H9S5 495 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 PDE7BQ9NP56 450 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 A0A1W2PS29 197 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 M0QYG6 137 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 CLDN2P57739 230 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 PSPHP78330 225 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 SBSNQ6UWP8 590 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 TMPPEQ6ZT21 453 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 SULF2Q8IWU5 870 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 LKAAEAR1Q8TD35 194 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 SERINC2Q96SA4 455 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 C11orf49Q9H6J7 331 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 PELI2Q9HAT8 420 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 INIPQ9NRY2 104 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 SH3BGRL2Q9UJC5 107 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 FAM221BA6H8Z2 402 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 METTL15A6NJ78 407 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 ZNF43P17038 809 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 RPS18P62269 152 aaKnown RBP11.28□□□□□ -0.6
UBR4-205ENST00000417040 PGM2L1Q6PCE3 622 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 ZNF322Q6U7Q0 402 aaPredicted RBP11.28□□□□□ -0.6
UBR4-205ENST00000417040 LRRC18Q8N456 261 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 DAZLQ92904 295 aaKnown RBP11.28□□□□□ -0.6
UBR4-205ENST00000417040 PRRT1Q99946 306 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 NAA11Q9BSU3 229 aaPredicted RBP11.28□□□□□ -0.6
UBR4-205ENST00000417040 C20orf85Q9H1P6 137 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 LINC00597Q9H2U6 94 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 KCNIP1Q9NZI2 227 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 NPAP1Q9NZP6 1156 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 MDFIC2A0A1B0GVS7 189 aa11.27□□□□□ -0.6
UBR4-205ENST00000417040 ANTXRLA6NF34 631 aa11.27□□□□□ -0.6
UBR4-205ENST00000417040 H0Y8G0 127 aa11.27□□□□□ -0.6
UBR4-205ENST00000417040 TNFRSF10AO00220 468 aa11.27□□□□□ -0.6
UBR4-205ENST00000417040 PDGFAP04085 211 aa11.27□□□□□ -0.6
UBR4-205ENST00000417040 ANXA7P20073 488 aaKnown RBP11.27□□□□□ -0.6
UBR4-205ENST00000417040 AKR1C1Q04828 323 aa11.27□□□□□ -0.6
UBR4-205ENST00000417040 CCINQ13939 588 aa11.27□□□□□ -0.6
UBR4-205ENST00000417040 ELOCQ15369 112 aa11.27□□□□□ -0.6
UBR4-205ENST00000417040 PAN3Q58A45 887 aaKnown RBP11.27□□□□□ -0.6
UBR4-205ENST00000417040 OR7E24Q6IFN5 339 aa11.27□□□□□ -0.6
UBR4-205ENST00000417040 IL17RCQ8NAC3 791 aa11.27□□□□□ -0.6
UBR4-205ENST00000417040 OR52I1Q8NGK6 324 aa11.27□□□□□ -0.6
UBR4-205ENST00000417040 FYTTD1Q96QD9 318 aaKnown RBP11.27□□□□□ -0.6
UBR4-205ENST00000417040 ATOH8Q96SQ7 321 aa11.27□□□□□ -0.6
UBR4-205ENST00000417040 RTP3Q9BQQ7 232 aa11.27□□□□□ -0.6
UBR4-205ENST00000417040 DNAJC5Q9H3Z4 198 aa11.27□□□□□ -0.6
UBR4-205ENST00000417040 RPH3ALQ9UNE2 315 aa11.27□□□□□ -0.6
UBR4-205ENST00000417040 SLC9B1P1A6NJY1 282 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 ANKRD28O15084 1053 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 PMP2P02689 132 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 SCG5P05408 212 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 RGRP47804 291 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 EXOSC6Q5RKV6 272 aaKnown RBP11.27□□□□□ -0.61
UBR4-205ENST00000417040 FAM122CQ6P4D5 195 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 ZNF534Q76KX8 674 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 NLRP8Q86W28 1048 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 LINC01599Q8WXQ3 324 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 BTBD2Q9BX70 525 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 C19orf12Q9NSK7 152 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 CA5BQ9Y2D0 317 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 CDHR4A6H8M9 788 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 C17orf105B2RV13 164 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 BHLHE40O14503 412 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 GAPDHSO14556 408 aaPredicted RBP11.27□□□□□ -0.61
UBR4-205ENST00000417040 SLC16A7O60669 478 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 PEX14O75381 377 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 SEC14L2O76054 403 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 ARHGEF15O94989 841 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 OR8G3PP0DMU2 310 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 TACR1P25103 407 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 GABRA5P31644 462 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 CDK3Q00526 305 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 FAPQ12884 760 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 IDO2Q6ZQW0 420 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 ABHD12BQ7Z5M8 362 aaPredicted RBP11.27□□□□□ -0.61
UBR4-205ENST00000417040 ZNF440Q8IYI8 595 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 ALDH16A1Q8IZ83 802 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 ACOT4Q8N9L9 421 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 HSD17B8Q92506 261 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 MRPL38Q96DV4 380 aaKnown RBP11.27□□□□□ -0.61
UBR4-205ENST00000417040 ARPC5LQ9BPX5 153 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 CPPED1Q9BRF8 314 aaPredicted RBP11.27□□□□□ -0.61
UBR4-205ENST00000417040 ULBP3Q9BZM4 244 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 PITHD1Q9GZP4 211 aaPredicted RBP11.27□□□□□ -0.61
UBR4-205ENST00000417040 ELOVL3Q9HB03 270 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 MRPS17Q9Y2R5 130 aaKnown RBP11.27□□□□□ -0.61
UBR4-205ENST00000417040 NAV1Q8NEY1 1877 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms