RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 ANKZF1Q9H8Y5 726 aa15.24■□□□□ 0.03
HMGN1-209ENST00000463631 GPATCH2Q9NW75 528 aa15.24■□□□□ 0.03
HMGN1-209ENST00000463631 EMC3Q9P0I2 261 aa15.24■□□□□ 0.03
HMGN1-209ENST00000463631 NPIPA5A0A0B4J1W7 369 aa15.23■□□□□ 0.03
HMGN1-209ENST00000463631 NPIPA7E9PJI5 369 aa15.23■□□□□ 0.03
HMGN1-209ENST00000463631 GTPBP1O00178 669 aaKnown RBP15.23■□□□□ 0.03
HMGN1-209ENST00000463631 AZIN1O14977 448 aa15.23■□□□□ 0.03
HMGN1-209ENST00000463631 SCAMP2O15127 329 aaKnown RBP15.23■□□□□ 0.03
HMGN1-209ENST00000463631 ZNF264O43296 627 aa15.23■□□□□ 0.03
HMGN1-209ENST00000463631 CSF3P09919 207 aa15.23■□□□□ 0.03
HMGN1-209ENST00000463631 DHRS4L1P0CG22 281 aa15.23■□□□□ 0.03
HMGN1-209ENST00000463631 NPIPA8P0DM63 369 aa15.23■□□□□ 0.03
HMGN1-209ENST00000463631 UBL4AP11441 157 aa15.23■□□□□ 0.03
HMGN1-209ENST00000463631 EFNA1P20827 205 aaPredicted RBP15.23■□□□□ 0.03
HMGN1-209ENST00000463631 PTNP21246 168 aa15.23■□□□□ 0.03
HMGN1-209ENST00000463631 HPCAL1P37235 193 aa15.23■□□□□ 0.03
HMGN1-209ENST00000463631 CBFBQ13951 182 aa15.23■□□□□ 0.03
HMGN1-209ENST00000463631 PDK3Q15120 406 aa15.23■□□□□ 0.03
HMGN1-209ENST00000463631 NDUFAF6Q330K2 333 aa15.23■□□□□ 0.03
HMGN1-209ENST00000463631 FBXW9Q5XUX1 488 aa15.23■□□□□ 0.03
HMGN1-209ENST00000463631 ZNF544Q6NX49 715 aa15.23■□□□□ 0.03
HMGN1-209ENST00000463631 KLHL17Q6TDP4 642 aa15.23■□□□□ 0.03
HMGN1-209ENST00000463631 HOMEZQ8IX15 550 aa15.23■□□□□ 0.03
HMGN1-209ENST00000463631 ZNF100Q8IYN0 542 aa15.23■□□□□ 0.03
HMGN1-209ENST00000463631 MUC15Q8N387 334 aa15.23■□□□□ 0.03
HMGN1-209ENST00000463631 ZNF525Q8N782 197 aa15.23■□□□□ 0.03
HMGN1-209ENST00000463631 ADAMTS15Q8TE58 950 aa15.23■□□□□ 0.03
HMGN1-209ENST00000463631 ST8SIA1Q92185 356 aa15.23■□□□□ 0.03
HMGN1-209ENST00000463631 ARL8AQ96BM9 186 aa15.23■□□□□ 0.03
HMGN1-209ENST00000463631 CHMP6Q96FZ7 201 aa15.23■□□□□ 0.03
HMGN1-209ENST00000463631 KCNK17Q96T54 332 aa15.23■□□□□ 0.03
HMGN1-209ENST00000463631 TRMOQ9BU70 441 aa15.23■□□□□ 0.03
HMGN1-209ENST00000463631 AMBRA1Q9C0C7 1298 aa15.23■□□□□ 0.03
HMGN1-209ENST00000463631 TUBB1Q9H4B7 451 aa15.23■□□□□ 0.03
HMGN1-209ENST00000463631 SLC25A15Q9Y619 301 aa15.23■□□□□ 0.03
HMGN1-209ENST00000463631 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.23■□□□□ 0.032e-11■■■■■ 38.2
HMGN1-209ENST00000463631 SVEP1Q4LDE5 3571 aa15.22■□□□□ 0.03
HMGN1-209ENST00000463631 CHEK2O96017 543 aa15.22■□□□□ 0.03
HMGN1-209ENST00000463631 BCKDHAP12694 445 aa15.22■□□□□ 0.03
HMGN1-209ENST00000463631 CD40P25942 277 aa15.22■□□□□ 0.03
HMGN1-209ENST00000463631 RPL3P39023 403 aaKnown RBP15.22■□□□□ 0.03
HMGN1-209ENST00000463631 CCT3P49368 545 aaKnown RBP15.22■□□□□ 0.03
HMGN1-209ENST00000463631 DIO1P49895 249 aa15.22■□□□□ 0.03
HMGN1-209ENST00000463631 RNF144AP50876 292 aaPredicted RBP15.22■□□□□ 0.03
HMGN1-209ENST00000463631 SKP2Q13309 424 aa15.22■□□□□ 0.03
HMGN1-209ENST00000463631 TP53BP2Q13625 1128 aa15.22■□□□□ 0.03
HMGN1-209ENST00000463631 RAB35Q15286 201 aa15.22■□□□□ 0.03
HMGN1-209ENST00000463631 TIGD2Q4W5G0 525 aa15.22■□□□□ 0.03
HMGN1-209ENST00000463631 LIPMQ5VYY2 423 aa15.22■□□□□ 0.03
HMGN1-209ENST00000463631 KANK2Q63ZY3 851 aa15.22■□□□□ 0.03
HMGN1-209ENST00000463631 SLC22A25Q6T423 547 aa15.22■□□□□ 0.03
HMGN1-209ENST00000463631 B3GLCTQ6Y288 498 aa15.22■□□□□ 0.03
HMGN1-209ENST00000463631 FBXL14Q8N1E6 418 aa15.22■□□□□ 0.03
HMGN1-209ENST00000463631 TMCO5AQ8N6Q1 288 aa15.22■□□□□ 0.03
HMGN1-209ENST00000463631 MNS1Q8NEH6 495 aa15.22■□□□□ 0.03
HMGN1-209ENST00000463631 SFXN5Q8TD22 340 aa15.22■□□□□ 0.03
HMGN1-209ENST00000463631 C10orf105Q8TEF2 133 aa15.22■□□□□ 0.03
HMGN1-209ENST00000463631 SLC25A43Q8WUT9 341 aaPredicted RBP15.22■□□□□ 0.03
HMGN1-209ENST00000463631 FAM168AQ92567 244 aa15.22■□□□□ 0.03
HMGN1-209ENST00000463631 PROX1Q92786 737 aa15.22■□□□□ 0.03
HMGN1-209ENST00000463631 OR5B2Q96R09 309 aa15.22■□□□□ 0.03
HMGN1-209ENST00000463631 NMUR2Q9GZQ4 415 aa15.22■□□□□ 0.03
HMGN1-209ENST00000463631 SHARPINQ9H0F6 387 aa15.22■□□□□ 0.03
HMGN1-209ENST00000463631 MALT1Q9UDY8 824 aa15.22■□□□□ 0.03
HMGN1-209ENST00000463631 TBK1Q9UHD2 729 aa15.22■□□□□ 0.03
HMGN1-209ENST00000463631 FAF1Q9UNN5 650 aaPredicted RBP15.22■□□□□ 0.03
HMGN1-209ENST00000463631 DNAJC15Q9Y5T4 150 aa15.22■□□□□ 0.03
HMGN1-209ENST00000463631 NUP214P35658 2090 aaPredicted RBP15.21■□□□□ 0.03
HMGN1-209ENST00000463631 A0A1W2PPM1 405 aa15.21■□□□□ 0.03
HMGN1-209ENST00000463631 ZNF716A6NP11 495 aa15.21■□□□□ 0.03
HMGN1-209ENST00000463631 TMEM114B3SHH9 223 aa15.21■□□□□ 0.03
HMGN1-209ENST00000463631 RAD51DO75771 328 aa15.21■□□□□ 0.03
HMGN1-209ENST00000463631 URI1O94763 535 aaPredicted RBP15.21■□□□□ 0.03
HMGN1-209ENST00000463631 CPA3P15088 417 aa15.21■□□□□ 0.03
HMGN1-209ENST00000463631 CRHR1P34998 444 aa15.21■□□□□ 0.03
HMGN1-209ENST00000463631 CCR4P51679 360 aa15.21■□□□□ 0.03
HMGN1-209ENST00000463631 CSNK2A1P68400 391 aaPredicted RBP15.21■□□□□ 0.03
HMGN1-209ENST00000463631 SPOCK1Q08629 439 aa15.21■□□□□ 0.03
HMGN1-209ENST00000463631 CYB5R2Q6BCY4 276 aa15.21■□□□□ 0.03
HMGN1-209ENST00000463631 TMPPEQ6ZT21 453 aa15.21■□□□□ 0.03
HMGN1-209ENST00000463631 ZNF614Q8N883 585 aa15.21■□□□□ 0.03
HMGN1-209ENST00000463631 OR2W6PQ8NHA6 318 aa15.21■□□□□ 0.03
HMGN1-209ENST00000463631 OR5P2Q8WZ92 322 aa15.21■□□□□ 0.03
HMGN1-209ENST00000463631 MOAP1Q96BY2 351 aa15.21■□□□□ 0.03
HMGN1-209ENST00000463631 INPP5KQ9BT40 448 aa15.21■□□□□ 0.03
HMGN1-209ENST00000463631 POU2F3Q9UKI9 436 aa15.21■□□□□ 0.03
HMGN1-209ENST00000463631 KCNE3Q9Y6H6 103 aa15.21■□□□□ 0.03
HMGN1-209ENST00000463631 ARFGEF3Q5TH69 2177 aa15.21■□□□□ 0.02
HMGN1-209ENST00000463631 SERINC4A6NH21 518 aa15.2■□□□□ 0.02
HMGN1-209ENST00000463631 C9JVG2 144 aa15.2■□□□□ 0.02
HMGN1-209ENST00000463631 LINC00032P0C843 101 aa15.2■□□□□ 0.02
HMGN1-209ENST00000463631 IGHV4-31P0DP07 118 aa15.2■□□□□ 0.02
HMGN1-209ENST00000463631 LAMP1P11279 417 aa15.2■□□□□ 0.02
HMGN1-209ENST00000463631 ZNF16P17020 682 aaPredicted RBP15.2■□□□□ 0.02
HMGN1-209ENST00000463631 CCT5P48643 541 aa15.2■□□□□ 0.02
HMGN1-209ENST00000463631 EFNA4P52798 201 aa15.2■□□□□ 0.02
HMGN1-209ENST00000463631 GALNTL6Q49A17 601 aa15.2■□□□□ 0.02
HMGN1-209ENST00000463631 SYT14P1Q58G82 188 aa15.2■□□□□ 0.02
HMGN1-209ENST00000463631 PDZK1Q5T2W1 519 aa15.2■□□□□ 0.02
HMGN1-209ENST00000463631 OR7E24Q6IFN5 339 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms