RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 LSMEM1Q8N8F7 131 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 B3GNT7Q8NFL0 401 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 OR4N2Q8NGD1 307 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 DCBLD2Q96PD2 775 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 ZNF559Q9BR84 538 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 ZNF426Q9BUY5 554 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 CNPPD1Q9BV87 410 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 LIN28AQ9H9Z2 209 aaKnown RBP13.88□□□□□ -0.19
SCAF11-204ENST00000395454 DNAJB12Q9NXW2 375 aaKnown RBP13.88□□□□□ -0.19
SCAF11-204ENST00000395454 IL20Q9NYY1 176 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 C19orf25Q9UFG5 118 aaPredicted RBP13.88□□□□□ -0.19
SCAF11-204ENST00000395454 HS3ST3B1Q9Y662 390 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 ZZEF1O43149 2961 aa13.87□□□□□ -0.19
SCAF11-204ENST00000395454 NPIPA5A0A0B4J1W7 369 aa13.87□□□□□ -0.19
SCAF11-204ENST00000395454 NPIPA7E9PJI5 369 aa13.87□□□□□ -0.19
SCAF11-204ENST00000395454 FADS2O95864 444 aaKnown RBP13.87□□□□□ -0.19
SCAF11-204ENST00000395454 NPIPA8P0DM63 369 aa13.87□□□□□ -0.19
SCAF11-204ENST00000395454 TNNI3P19429 210 aa13.87□□□□□ -0.19
SCAF11-204ENST00000395454 PCYT1AP49585 367 aa13.87□□□□□ -0.19
SCAF11-204ENST00000395454 SMSP52788 366 aa13.87□□□□□ -0.19
SCAF11-204ENST00000395454 ATP12AP54707 1039 aa13.87□□□□□ -0.19
SCAF11-204ENST00000395454 OR1Q1Q15612 314 aa13.87□□□□□ -0.19
SCAF11-204ENST00000395454 ELAVL1Q15717 326 aaKnown RBP13.87□□□□□ -0.19
SCAF11-204ENST00000395454 CTF1Q16619 201 aa13.87□□□□□ -0.19
SCAF11-204ENST00000395454 PDZK1Q5T2W1 519 aa13.87□□□□□ -0.19
SCAF11-204ENST00000395454 MEDAGQ5VYS4 303 aa13.87□□□□□ -0.19
SCAF11-204ENST00000395454 RNLSQ5VYX0 342 aa13.87□□□□□ -0.19
SCAF11-204ENST00000395454 TMEM205Q6UW68 189 aa13.87□□□□□ -0.19
SCAF11-204ENST00000395454 NRMQ8IXM6 262 aa13.87□□□□□ -0.19
SCAF11-204ENST00000395454 C9orf43Q8TAL5 461 aaPredicted RBP13.87□□□□□ -0.19
SCAF11-204ENST00000395454 TMEM255BQ8WV15 326 aa13.87□□□□□ -0.19
SCAF11-204ENST00000395454 SENP5Q96HI0 755 aaPredicted RBP13.87□□□□□ -0.19
SCAF11-204ENST00000395454 ITPAQ9BY32 194 aa13.87□□□□□ -0.19
SCAF11-204ENST00000395454 DPH1Q9BZG8 443 aa13.87□□□□□ -0.19
SCAF11-204ENST00000395454 PLA2G12AQ9BZM1 189 aa13.87□□□□□ -0.19
SCAF11-204ENST00000395454 TIMMDC1Q9NPL8 285 aa13.87□□□□□ -0.19
SCAF11-204ENST00000395454 GPR83Q9NYM4 423 aa13.87□□□□□ -0.19
SCAF11-204ENST00000395454 CBLCQ9ULV8 474 aa13.87□□□□□ -0.19
SCAF11-204ENST00000395454 SLC7A7Q9UM01 511 aa13.87□□□□□ -0.19
SCAF11-204ENST00000395454 CLCA3PQ9Y6N3 262 aa13.87□□□□□ -0.19
SCAF11-204ENST00000395454 ANKRD11Q6UB99 2663 aaPredicted RBP13.87□□□□□ -0.19
SCAF11-204ENST00000395454 MGAQ8IWI9 3026 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 A0A0B4J2E0 115 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 A0A1B0GX12 115 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 NOL3O60936 208 aaKnown RBP13.86□□□□□ -0.19
SCAF11-204ENST00000395454 DDAH2O95865 285 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 IGHEP01854 428 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 CCNA2P20248 432 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 C21orf33P30042 268 aaPredicted RBP13.86□□□□□ -0.19
SCAF11-204ENST00000395454 ACAA2P42765 397 aaKnown RBP13.86□□□□□ -0.19
SCAF11-204ENST00000395454 ST13P50502 369 aaKnown RBP13.86□□□□□ -0.19
SCAF11-204ENST00000395454 PGDP52209 483 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 NUDT6P53370 316 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 FOXD4Q12950 439 aaPredicted RBP13.86□□□□□ -0.19
SCAF11-204ENST00000395454 GINS1Q14691 196 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 UNQ6494/PRO21346Q6UXR6 183 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 WDR88Q6ZMY6 472 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 ZNF620Q6ZNG0 422 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 CPEB2Q7Z5Q1 589 aaKnown RBP13.86□□□□□ -0.19
SCAF11-204ENST00000395454 BCORP1Q8N888 145 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 FAM71CQ8NEG0 241 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 OR8D4Q8NGM9 314 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 FAM46AQ96IP4 442 aaKnown RBP13.86□□□□□ -0.19
SCAF11-204ENST00000395454 KRCC1Q9NPI7 259 aaPredicted RBP13.86□□□□□ -0.19
SCAF11-204ENST00000395454 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.86□□□□□ -0.19
SCAF11-204ENST00000395454 CFL2Q9Y281 166 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 RRP8O43159 456 aaKnown RBP13.86□□□□□ -0.19
SCAF11-204ENST00000395454 ENTPD6O75354 484 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 ADH7P40394 386 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 PPICP45877 212 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 CTBP2P56545 445 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 ST3GAL4Q11206 333 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 NFATC3Q12968 1075 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 ACSM5Q6NUN0 579 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 SLC27A4Q6P1M0 643 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 KIRREL2Q6UWL6 708 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 RRM2BQ7LG56 351 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 RAB43Q86YS6 212 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 TEX47Q8TBZ9 253 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 CNOT9Q92600 299 aaKnown RBP13.86□□□□□ -0.19
SCAF11-204ENST00000395454 OSTF1Q92882 214 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 CCNL2Q96S94 520 aaPredicted RBP13.86□□□□□ -0.19
SCAF11-204ENST00000395454 LPAR4Q99677 370 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 AMBNQ9NP70 447 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 CNIH4Q9P003 139 aa13.86□□□□□ -0.19
SCAF11-204ENST00000395454 SOCS6O14544 535 aa13.85□□□□□ -0.19
SCAF11-204ENST00000395454 CHP2O43745 196 aa13.85□□□□□ -0.19
SCAF11-204ENST00000395454 DYRK3O43781 588 aa13.85□□□□□ -0.19
SCAF11-204ENST00000395454 PRKYO43930 277 aa13.85□□□□□ -0.19
SCAF11-204ENST00000395454 NTN1O95631 604 aa13.85□□□□□ -0.19
SCAF11-204ENST00000395454 GKN3PP0CG01 181 aa13.85□□□□□ -0.19
SCAF11-204ENST00000395454 WT1P19544 449 aaPredicted RBP13.85□□□□□ -0.19
SCAF11-204ENST00000395454 TGFBR2P37173 567 aa13.85□□□□□ -0.19
SCAF11-204ENST00000395454 EIF2S3P41091 472 aaKnown RBP13.85□□□□□ -0.19
SCAF11-204ENST00000395454 PRKCDQ05655 676 aa13.85□□□□□ -0.19
SCAF11-204ENST00000395454 PLAG1Q6DJT9 500 aa13.85□□□□□ -0.19
SCAF11-204ENST00000395454 PAPD4Q6PIY7 484 aaKnown RBP13.85□□□□□ -0.19
SCAF11-204ENST00000395454 PPP1R32Q7Z5V6 425 aa13.85□□□□□ -0.19
SCAF11-204ENST00000395454 OR11G2Q8NGC1 345 aa13.85□□□□□ -0.19
SCAF11-204ENST00000395454 ZNF721Q8TF20 911 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms