RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ERVK-19Q9WJR5 959 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 LIPT1Q9Y234 373 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 APC2O95996 2303 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 PRSS29PA6NIE9 313 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 A8MUA0 341 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 EVPLLA8MZ36 301 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 TAF4O00268 1085 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 CLIC1O00299 241 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 EBAG9O00559 213 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 AIM2O14862 343 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 NKX2-2O95096 273 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 AK1P00568 194 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 HMGN2P05204 90 aaKnown RBP5.27□□□□□ -1.57
SCAF11-213ENST00000550629 ALOX5P09917 674 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 CT45A8P0DMV1 189 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 CT45A9P0DMV2 189 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 T-ENOLP0DO92 83 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 PRKAR1AP10644 381 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 CD1EP15812 388 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 EFNA1P20827 205 aaPredicted RBP5.27□□□□□ -1.57
SCAF11-213ENST00000550629 CDKN2CP42773 168 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 TMED10P49755 219 aaKnown RBP5.27□□□□□ -1.57
SCAF11-213ENST00000550629 NUDT2P50583 147 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 RASSF2P50749 326 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 MVDP53602 400 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 POU6F2P78424 691 aaPredicted RBP5.27□□□□□ -1.57
SCAF11-213ENST00000550629 MRPS22P82650 360 aaKnown RBP5.27□□□□□ -1.57
SCAF11-213ENST00000550629 Q0VFX4 171 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 BNIP1Q12981 228 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 SRSF6Q13247 344 aaKnown RBP5.27□□□□□ -1.57
SCAF11-213ENST00000550629 ART3Q13508 389 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 EXOSC7Q15024 291 aaKnown RBP5.27□□□□□ -1.57
SCAF11-213ENST00000550629 RUNDC3AQ59EK9 446 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 CT45A2Q5DJT8 189 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 ACER2Q5QJU3 275 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 ATAD3BQ5T9A4 648 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 AGAP7PQ5VUJ5 663 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 PRAMEF8Q5VWM4 474 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 PRAMEF7Q5VXH5 474 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 NANOGP8Q6NSW7 305 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 CDC73Q6P1J9 531 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 C8orf82Q6P1X6 216 aaPredicted RBP5.27□□□□□ -1.57
SCAF11-213ENST00000550629 C16orf89Q6UX73 402 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 SERPINA11Q86U17 422 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 ZBTB46Q86UZ6 589 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 HPS6Q86YV9 775 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 MSRB3Q8IXL7 192 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 C9orf40Q8IXQ3 194 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 TAGAPQ8N103 731 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 ARHGAP24Q8N264 748 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 GALNT16Q8N428 558 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 SLC22A8Q8TCC7 542 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 PSMF1Q92530 271 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 ADIPOR1Q96A54 375 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 THOC3Q96J01 351 aaKnown RBP5.27□□□□□ -1.57
SCAF11-213ENST00000550629 SLC35G5Q96KT7 338 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 ZNF354BQ96LW1 612 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 AGAP4Q96P64 663 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 TRIB1Q96RU8 372 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 NPAS2Q99743 824 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 GPATCH1Q9BRR8 931 aaKnown RBP5.27□□□□□ -1.57
SCAF11-213ENST00000550629 C1orf43Q9BWL3 253 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 PIGUQ9H490 435 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 KAT8Q9H7Z6 458 aaKnown RBP5.27□□□□□ -1.57
SCAF11-213ENST00000550629 NANOGQ9H9S0 305 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 FOLH1BQ9HBA9 442 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 HHATLQ9HCP6 504 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 Q9N2J8 555 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 SPAG4Q9NPE6 437 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 POLE3Q9NRF9 147 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 SLC6A13Q9NSD5 602 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 EXD2Q9NVH0 621 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 ARL8BQ9NVJ2 186 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 SCN3AQ9NY46 2000 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 VAPAQ9P0L0 249 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 ABI3Q9P2A4 366 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 BCAP29Q9UHQ4 241 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 ZNF223Q9UK11 482 aaPredicted RBP5.27□□□□□ -1.57
SCAF11-213ENST00000550629 MRTO4Q9UKD2 239 aaKnown RBP5.27□□□□□ -1.57
SCAF11-213ENST00000550629 YARS2Q9Y2Z4 477 aaKnown RBP5.27□□□□□ -1.57
SCAF11-213ENST00000550629 COX11Q9Y6N1 276 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 CFAP47Q6ZTR5 3102 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 ZZEF1O43149 2961 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 ASPMQ8IZT6 3477 aa5.27□□□□□ -1.57
SCAF11-213ENST00000550629 SEC16AO15027 2179 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 DSPP15924 2871 aaKnown RBP5.26□□□□□ -1.57
SCAF11-213ENST00000550629 TMEM247A6NEH6 219 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 ARGFXA6NJG6 315 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 ZNF785A8K8V0 405 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 HMGN4O00479 90 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 DNAJB5O75953 348 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 UNC5CO95185 931 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 CBX6O95503 412 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 IL33O95760 270 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 NGFRP08138 427 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 MATN1P21941 496 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 ITGA3P26006 1051 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 ITPKBP27987 946 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 PTGER1P34995 402 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 CPOXP36551 454 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms