RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 TET1Q8NFU7 2136 aa16.48■□□□□ 0.23
NUP54-205ENST00000507257 TOXO94900 526 aa16.48■□□□□ 0.23
NUP54-205ENST00000507257 ATP1B1P05026 303 aa16.48■□□□□ 0.23
NUP54-205ENST00000507257 NT5EP21589 574 aa16.48■□□□□ 0.23
NUP54-205ENST00000507257 DRD5P21918 477 aa16.48■□□□□ 0.23
NUP54-205ENST00000507257 SLC2A5P22732 501 aa16.48■□□□□ 0.23
NUP54-205ENST00000507257 TPMTP51580 245 aa16.48■□□□□ 0.23
NUP54-205ENST00000507257 DPTQ07507 201 aa16.48■□□□□ 0.23
NUP54-205ENST00000507257 TCTN1Q2MV58 587 aa16.48■□□□□ 0.23
NUP54-205ENST00000507257 MRM1Q6IN84 353 aaKnown RBP16.48■□□□□ 0.23
NUP54-205ENST00000507257 OR5K2Q8NHB8 316 aa16.48■□□□□ 0.23
NUP54-205ENST00000507257 FANK1Q8TC84 345 aa16.48■□□□□ 0.23
NUP54-205ENST00000507257 ELP4Q96EB1 424 aa16.48■□□□□ 0.23
NUP54-205ENST00000507257 C16orf58Q96GQ5 468 aa16.48■□□□□ 0.23
NUP54-205ENST00000507257 HS6ST2Q96MM7 605 aa16.48■□□□□ 0.23
NUP54-205ENST00000507257 ADGRL4Q9HBW9 690 aa16.48■□□□□ 0.23
NUP54-205ENST00000507257 BRD7Q9NPI1 651 aa16.48■□□□□ 0.23
NUP54-205ENST00000507257 MGAT4CQ9UBM8 478 aa16.48■□□□□ 0.23
NUP54-205ENST00000507257 PLAGL1Q9UM63 463 aa16.48■□□□□ 0.23
NUP54-205ENST00000507257 MRPS7Q9Y2R9 242 aaKnown RBP16.48■□□□□ 0.23
NUP54-205ENST00000507257 SLC22A23A1A5C7 686 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 LRIT2A6NDA9 550 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 PRR23D1E9PI22 279 aaPredicted RBP16.47■□□□□ 0.23
NUP54-205ENST00000507257 REM1O75628 298 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 RCBTB2O95199 551 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 HRGP04196 525 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 ALDOBP05062 364 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 PRR23D2P0DMB1 279 aaPredicted RBP16.47■□□□□ 0.23
NUP54-205ENST00000507257 BMP7P18075 431 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 FXYD6P3P58550 94 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 SLC9A5Q14940 896 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 ZSWIM7Q19AV6 140 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 ZNF793Q6ZN11 406 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 NUDT18Q6ZVK8 323 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 PARS2Q7L3T8 475 aaKnown RBP16.47■□□□□ 0.23
NUP54-205ENST00000507257 OR4D9Q8NGE8 314 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 AUTS2Q8WXX7 1259 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 TFGQ92734 400 aaPredicted RBP16.47■□□□□ 0.23
NUP54-205ENST00000507257 GHSRQ92847 366 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 ZG16BQ96DA0 208 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 CNRIP1Q96F85 164 aaPredicted RBP16.47■□□□□ 0.23
NUP54-205ENST00000507257 CD180Q99467 661 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 TBX5Q99593 518 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 GPN1Q9HCN4 374 aaPredicted RBP16.47■□□□□ 0.23
NUP54-205ENST00000507257 A0A1W2PPV9 198 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 FEZF1A0PJY2 475 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 H7BY64 318 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 OR1F1O43749 312 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 GMDSO60547 372 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 AGR2O95994 175 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 VEGFCP49767 419 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 CSNK1G2P78368 415 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 TMEM215Q68D42 235 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 HDDC3Q8N4P3 179 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 POF1BQ8WVV4 589 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 PRAP1Q96NZ9 151 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 PRSS27Q9BQR3 290 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 MRI1Q9BV20 369 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 ACTRT3Q9BYD9 372 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 MTG2Q9H4K7 406 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 CDCP1Q9H5V8 836 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 AUNIPQ9H7T9 357 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 SIDT1Q9NXL6 827 aaKnown RBP16.47■□□□□ 0.23
NUP54-205ENST00000507257 CES1P1Q9UKY3 287 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 ZNF443Q9Y2A4 671 aaPredicted RBP16.47■□□□□ 0.23
NUP54-205ENST00000507257 SLC35A3Q9Y2D2 325 aa16.47■□□□□ 0.23
NUP54-205ENST00000507257 CDHR4A6H8M9 788 aa16.46■□□□□ 0.23
NUP54-205ENST00000507257 DUXAA6NLW8 204 aa16.46■□□□□ 0.23
NUP54-205ENST00000507257 NEDD8-MDP1E9PL57 170 aa16.46■□□□□ 0.23
NUP54-205ENST00000507257 RGS11O94810 467 aa16.46■□□□□ 0.23
NUP54-205ENST00000507257 SYN1P17600 705 aa16.46■□□□□ 0.23
NUP54-205ENST00000507257 CSNK2A2P19784 350 aaPredicted RBP16.46■□□□□ 0.23
NUP54-205ENST00000507257 MAT2AP31153 395 aaKnown RBP16.46■□□□□ 0.23
NUP54-205ENST00000507257 MNDAP41218 407 aa16.46■□□□□ 0.23
NUP54-205ENST00000507257 GPR1P46091 355 aa16.46■□□□□ 0.23
NUP54-205ENST00000507257 GAS6Q14393 721 aa16.46■□□□□ 0.23
NUP54-205ENST00000507257 KRT33BQ14525 404 aa16.46■□□□□ 0.23
NUP54-205ENST00000507257 ZIC1Q15915 447 aa16.46■□□□□ 0.23
NUP54-205ENST00000507257 ZNF626Q68DY1 528 aa16.46■□□□□ 0.23
NUP54-205ENST00000507257 SYS1Q8N2H4 156 aa16.46■□□□□ 0.23
NUP54-205ENST00000507257 C2orf73Q8N5S3 287 aaPredicted RBP16.46■□□□□ 0.23
NUP54-205ENST00000507257 BVESQ8NE79 360 aa16.46■□□□□ 0.23
NUP54-205ENST00000507257 NUP43Q8NFH3 380 aa16.46■□□□□ 0.23
NUP54-205ENST00000507257 RIT1Q92963 219 aa16.46■□□□□ 0.23
NUP54-205ENST00000507257 SMIM19Q96E16 107 aa16.46■□□□□ 0.23
NUP54-205ENST00000507257 NUS1Q96E22 293 aa16.46■□□□□ 0.23
NUP54-205ENST00000507257 HCAR1Q9BXC0 346 aa16.46■□□□□ 0.23
NUP54-205ENST00000507257 MED20Q9H944 212 aa16.46■□□□□ 0.23
NUP54-205ENST00000507257 KLHL9Q9P2J3 617 aa16.46■□□□□ 0.23
NUP54-205ENST00000507257 BAIAP2Q9UQB8 552 aa16.46■□□□□ 0.23
NUP54-205ENST00000507257 HEATR5BQ9P2D3 2071 aa16.46■□□□□ 0.23
NUP54-205ENST00000507257 MYO10Q9HD67 2058 aa16.45■□□□□ 0.22
NUP54-205ENST00000507257 TCF20Q9UGU0 1960 aaKnown RBP16.45■□□□□ 0.22
NUP54-205ENST00000507257 ZC3H12DA2A288 527 aaKnown RBP16.45■□□□□ 0.22
NUP54-205ENST00000507257 TMEM88BA6NKF7 163 aa16.45■□□□□ 0.22
NUP54-205ENST00000507257 J3QLW9 94 aa16.45■□□□□ 0.22
NUP54-205ENST00000507257 AIPO00170 330 aa16.45■□□□□ 0.22
NUP54-205ENST00000507257 SPINT1O43278 529 aa16.45■□□□□ 0.22
NUP54-205ENST00000507257 ZIC2O95409 532 aaPredicted RBP16.45■□□□□ 0.22
NUP54-205ENST00000507257 PPP3CBP16298 524 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms