RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 TGFBR3Q03167 851 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 DHX9Q08211 1270 aaKnown RBP5.49□□□□□ -1.53
HDAC3-206ENST00000471968 CSTF3Q12996 717 aaKnown RBP5.49□□□□□ -1.53
HDAC3-206ENST00000471968 DHX34Q14147 1143 aaKnown RBP5.49□□□□□ -1.53
HDAC3-206ENST00000471968 AP5B1Q2VPB7 878 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 ALKBH6Q3KRA9 238 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 TECRLQ5HYJ1 363 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 CPTPQ5TA50 214 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 CDKAL1Q5VV42 579 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 BTNL3Q6UXE8 466 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 MARCH3Q86UD3 253 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 GPR180Q86V85 440 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 PALM2Q8IXS6 379 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 KLHDC8BQ8IXV7 354 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 NKAPQ8N5F7 415 aaKnown RBP5.49□□□□□ -1.53
HDAC3-206ENST00000471968 POU5F2Q8N7G0 328 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 SLC9A6Q92581 669 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 ALG3Q92685 438 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 HIST1H2AHQ96KK5 128 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 PRR25Q96S07 402 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 DIRC2Q96SL1 478 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 NDNQ99608 321 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 HIST1H2AJQ99878 128 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 H2AFJQ9BTM1 129 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 SORBS1Q9BX66 1292 aaKnown RBP5.49□□□□□ -1.53
HDAC3-206ENST00000471968 DPAGT1Q9H3H5 408 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 ZNF385DQ9H6B1 395 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 FLRT3Q9NZU0 649 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 TRMT6Q9UJA5 497 aaKnown RBP5.49□□□□□ -1.53
HDAC3-206ENST00000471968 RIMKLBQ9ULI2 386 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 HIF3AQ9Y2N7 669 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 KCNE2Q9Y6J6 123 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 GOLGA8KD6RF30 607 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 GOLGA8TH3BQL2 631 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 PDLIM1O00151 329 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 SAP18O00422 153 aaKnown RBP5.48□□□□□ -1.53
HDAC3-206ENST00000471968 TNFRSF13BO14836 293 aaPredicted RBP5.48□□□□□ -1.53
HDAC3-206ENST00000471968 FADS1O60427 444 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 CYTIPO60759 359 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 SCELO95171 688 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 GAS8O95995 478 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 C8GP07360 202 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 OR12D1P0DN82 309 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 ADRA1DP25100 572 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 GSTM2P28161 218 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 CDKN2BP42772 138 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 CRYBB2P43320 205 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 PNLIPRP2P54317 469 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 CORO7P57737 925 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 BPIFB3P59826 476 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 CRADDP78560 199 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 LCP2Q13094 533 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 DAG1Q14118 895 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 RAB39AQ14964 217 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 CYP27C1Q4G0S4 372 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 DARS2Q6PI48 645 aaKnown RBP5.48□□□□□ -1.53
HDAC3-206ENST00000471968 LRRN1Q6UXK5 716 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 USP51Q70EK9 711 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 SDCCAG8Q86SQ7 713 aaPredicted RBP5.48□□□□□ -1.53
HDAC3-206ENST00000471968 MYPOPQ86VE0 399 aaPredicted RBP5.48□□□□□ -1.53
HDAC3-206ENST00000471968 LRP11Q86VZ4 500 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 THOC6Q86W42 341 aaKnown RBP5.48□□□□□ -1.53
HDAC3-206ENST00000471968 MUC20Q8N307 709 aaPredicted RBP5.48□□□□□ -1.53
HDAC3-206ENST00000471968 SRFBP1Q8NEF9 429 aaKnown RBP5.48□□□□□ -1.53
HDAC3-206ENST00000471968 OR52R1Q8NGF1 315 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 PTCD3Q96EY7 689 aaKnown RBP5.48□□□□□ -1.53
HDAC3-206ENST00000471968 MRGPRX4Q96LA9 322 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 LRRC1Q9BTT6 524 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 PPA2Q9H2U2 334 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 COQ10BQ9H8M1 238 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 INPP5EQ9NRR6 644 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 IARS2Q9NSE4 1012 aaKnown RBP5.48□□□□□ -1.53
HDAC3-206ENST00000471968 MRPL15Q9P015 296 aaKnown RBP5.48□□□□□ -1.53
HDAC3-206ENST00000471968 MYEF2Q9P2K5 600 aaKnown RBP5.48□□□□□ -1.53
HDAC3-206ENST00000471968 UPB1Q9UBR1 384 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 PHF11Q9UIL8 331 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 DCTN4Q9UJW0 460 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 VPREB3Q9UKI3 123 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 FZR1Q9UM11 496 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 SLC22A14Q9Y267 594 aa5.48□□□□□ -1.53
HDAC3-206ENST00000471968 GPR55Q9Y2T6 319 aaPredicted RBP5.48□□□□□ -1.53
HDAC3-206ENST00000471968 NOSIPQ9Y314 301 aaKnown RBP5.48□□□□□ -1.53
HDAC3-206ENST00000471968 A0A087WZY1 265 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 A0A1W2PPW3 197 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 A0A1W2PRB8 838 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 BTBD17A6NE02 478 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 TPD52L2O43399 206 aaKnown RBP5.47□□□□□ -1.53
HDAC3-206ENST00000471968 NME6O75414 186 aaPredicted RBP5.47□□□□□ -1.53
HDAC3-206ENST00000471968 TGDSO95455 350 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 METTL18O95568 372 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 CELA3BP08861 270 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 C1GALT1C1LP0DN25 315 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 NR2F6P10588 404 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 SLC6A9P48067 706 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 PGGT1BP53609 377 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 TUBA1BP68363 451 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 TUBA4AP68366 448 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 MRPS22P82650 360 aaKnown RBP5.47□□□□□ -1.53
HDAC3-206ENST00000471968 PLPPR5Q32ZL2 321 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 TMEM176BQ3YBM2 270 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms