RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 TNIP2Q8NFZ5 429 aa16.69■□□□□ 0.26
CHTOP-202ENST00000368687 SLC38A5Q8WUX1 472 aa16.69■□□□□ 0.26
CHTOP-202ENST00000368687 WDR60Q8WVS4 1066 aa16.69■□□□□ 0.26
CHTOP-202ENST00000368687 AURKBQ96GD4 344 aaPredicted RBP16.69■□□□□ 0.26
CHTOP-202ENST00000368687 ZNF317Q96PQ6 595 aaPredicted RBP16.69■□□□□ 0.26
CHTOP-202ENST00000368687 TREX2Q9BQ50 279 aaPredicted RBP16.69■□□□□ 0.26
CHTOP-202ENST00000368687 TIGARQ9NQ88 270 aa16.69■□□□□ 0.26
CHTOP-202ENST00000368687 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.69■□□□□ 0.26
CHTOP-202ENST00000368687 FOXD3Q9UJU5 478 aaPredicted RBP16.69■□□□□ 0.26
CHTOP-202ENST00000368687 ZNF232Q9UNY5 417 aa16.69■□□□□ 0.26
CHTOP-202ENST00000368687 TRBV5-3A0A0A0MS03 114 aa16.68■□□□□ 0.26
CHTOP-202ENST00000368687 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.68■□□□□ 0.26
CHTOP-202ENST00000368687 FAM90A27PA6NNH2 459 aa16.68■□□□□ 0.26
CHTOP-202ENST00000368687 BBIP1A8MTZ0 92 aa16.68■□□□□ 0.26
CHTOP-202ENST00000368687 C5orf58C9J3I9 102 aa16.68■□□□□ 0.26
CHTOP-202ENST00000368687 ADAMDEC1O15204 470 aa16.68■□□□□ 0.26
CHTOP-202ENST00000368687 CYP7B1O75881 506 aa16.68■□□□□ 0.26
CHTOP-202ENST00000368687 TOXO94900 526 aa16.68■□□□□ 0.26
CHTOP-202ENST00000368687 BCHEP06276 602 aa16.68■□□□□ 0.26
CHTOP-202ENST00000368687 THBS1P07996 1170 aa16.68■□□□□ 0.26
CHTOP-202ENST00000368687 TMIGD3P0DMS9 266 aaPredicted RBP16.68■□□□□ 0.26
CHTOP-202ENST00000368687 COX6B1P14854 86 aa16.68■□□□□ 0.26
CHTOP-202ENST00000368687 PRKCAP17252 672 aa16.68■□□□□ 0.26
CHTOP-202ENST00000368687 FOXF1Q12946 379 aa16.68■□□□□ 0.26
CHTOP-202ENST00000368687 QPRTQ15274 297 aa16.68■□□□□ 0.26
CHTOP-202ENST00000368687 MAPK14Q16539 360 aa16.68■□□□□ 0.26
CHTOP-202ENST00000368687 SGCBQ16585 318 aa16.68■□□□□ 0.26
CHTOP-202ENST00000368687 PAGE3Q5JUK9 113 aa16.68■□□□□ 0.26
CHTOP-202ENST00000368687 DHDDSQ86SQ9 333 aa16.68■□□□□ 0.26
CHTOP-202ENST00000368687 OR5M1Q8NGP8 315 aa16.68■□□□□ 0.26
CHTOP-202ENST00000368687 BBS10Q8TAM1 723 aa16.68■□□□□ 0.26
CHTOP-202ENST00000368687 SMPDL3BQ92485 455 aa16.68■□□□□ 0.26
CHTOP-202ENST00000368687 SPOCK3Q9BQ16 436 aa16.68■□□□□ 0.26
CHTOP-202ENST00000368687 BCL2L10Q9HD36 194 aa16.68■□□□□ 0.26
CHTOP-202ENST00000368687 SERINC1Q9NRX5 453 aa16.68■□□□□ 0.26
CHTOP-202ENST00000368687 SLC25A37Q9NYZ2 338 aa16.68■□□□□ 0.26
CHTOP-202ENST00000368687 VAPAQ9P0L0 249 aa16.68■□□□□ 0.26
CHTOP-202ENST00000368687 MCTS1Q9ULC4 181 aaKnown RBP16.68■□□□□ 0.26
CHTOP-202ENST00000368687 IFT52Q9Y366 437 aa16.68■□□□□ 0.26
CHTOP-202ENST00000368687 MED12LQ86YW9 2145 aa16.67■□□□□ 0.26
CHTOP-202ENST00000368687 PKDREJQ9NTG1 2253 aa16.67■□□□□ 0.26
CHTOP-202ENST00000368687 HCFC1P51610 2035 aa16.67■□□□□ 0.26
CHTOP-202ENST00000368687 NPPAP01160 153 aa16.67■□□□□ 0.26
CHTOP-202ENST00000368687 GPX2P18283 190 aa16.67■□□□□ 0.26
CHTOP-202ENST00000368687 DLX5P56178 289 aa16.67■□□□□ 0.26
CHTOP-202ENST00000368687 GCNT6Q5T4J0 391 aa16.67■□□□□ 0.26
CHTOP-202ENST00000368687 C3orf33Q6P1S2 294 aa16.67■□□□□ 0.26
CHTOP-202ENST00000368687 GGNQ86UU5 652 aa16.67■□□□□ 0.26
CHTOP-202ENST00000368687 KRT73Q86Y46 540 aa16.67■□□□□ 0.26
CHTOP-202ENST00000368687 LILRA2Q8N149 483 aa16.67■□□□□ 0.26
CHTOP-202ENST00000368687 FBXO27Q8NI29 283 aa16.67■□□□□ 0.26
CHTOP-202ENST00000368687 SLC25A43Q8WUT9 341 aaPredicted RBP16.67■□□□□ 0.26
CHTOP-202ENST00000368687 TMEM19Q96HH6 336 aa16.67■□□□□ 0.26
CHTOP-202ENST00000368687 KLHL15Q96M94 604 aa16.67■□□□□ 0.26
CHTOP-202ENST00000368687 THUMPD3Q9BV44 507 aaKnown RBP16.67■□□□□ 0.26
CHTOP-202ENST00000368687 PINK1Q9BXM7 581 aa16.67■□□□□ 0.26
CHTOP-202ENST00000368687 NSRP1Q9H0G5 558 aaKnown RBP16.67■□□□□ 0.26
CHTOP-202ENST00000368687 PIGMQ9H3S5 423 aa16.67■□□□□ 0.26
CHTOP-202ENST00000368687 SPIN1Q9Y657 262 aaPredicted RBP16.67■□□□□ 0.26
CHTOP-202ENST00000368687 CENPVL1A0A0U1RR11 272 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 FAAHO00519 579 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 EIF1AYO14602 144 aaKnown RBP16.66■□□□□ 0.26
CHTOP-202ENST00000368687 OIP5O43482 229 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 NTN1O95631 604 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 C1QCP02747 245 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 ETS2P15036 469 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 BMP5P22003 454 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 HTR3AP46098 478 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 ASCL1P50553 236 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 MAP2K6P52564 334 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 ZNF136P52737 540 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 CLDN15P56746 228 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 CLDN20P56880 219 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 TFF3Q07654 80 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 NFYCQ13952 458 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 CDSNQ15517 529 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 NDUFAF6Q330K2 333 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 FBXL19-AS1Q494R0 122 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 RNF220Q5VTB9 566 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 CGB2Q6NT52 195 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 DLEU7Q6UYE1 221 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 C9orf106Q8NAJ2 232 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 NAXEQ8NCW5 288 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 OR52P1PQ8NH57 321 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 OR2V1Q8NHB1 315 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 ZNF563Q8TA94 476 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 POC1BQ8TC44 478 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 SLC35B4Q969S0 331 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 SH3GL1Q99961 368 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 SPATA5L1Q9BVQ7 753 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 TMEM38AQ9H6F2 299 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 ACER3Q9NUN7 267 aa16.66■□□□□ 0.26
CHTOP-202ENST00000368687 SHISA8B8ZZ34 492 aa16.65■□□□□ 0.26
CHTOP-202ENST00000368687 CCDC22O60826 627 aa16.65■□□□□ 0.26
CHTOP-202ENST00000368687 SYNGR4O95473 234 aa16.65■□□□□ 0.26
CHTOP-202ENST00000368687 PABPC4LP0CB38 370 aaKnown RBP16.65■□□□□ 0.26
CHTOP-202ENST00000368687 GRNP28799 593 aaKnown RBP16.65■□□□□ 0.26
CHTOP-202ENST00000368687 APOBEC1P41238 236 aaKnown RBP16.65■□□□□ 0.26
CHTOP-202ENST00000368687 EIF1AXP47813 144 aaKnown RBP16.65■□□□□ 0.26
CHTOP-202ENST00000368687 SUCLG1P53597 346 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms