RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 VAT1LQ9HCJ6 419 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 MKKSQ9NPJ1 570 aaPredicted RBP4.41□□□□□ -1.7
LINC01109-201ENST00000603837 TEX10Q9NXF1 929 aaPredicted RBP4.41□□□□□ -1.7
LINC01109-201ENST00000603837 ADAMTS5Q9UNA0 930 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 RCE1Q9Y256 329 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 KCNIP3Q9Y2W7 256 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 RAP2CQ9Y3L5 183 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 A0A087WZY1 265 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 TRBV2A0A0J9YWF9 115 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 A0A1B0GW55 424 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 TRBC2A0A5B9 178 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 CBY3A6NI87 242 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 TMEM200CA6NKL6 621 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 CLCA1A8K7I4 914 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 TMEM189-UBE2V1I3L0A0 370 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 ACOT7O00154 380 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 SLC33A1O00400 549 aaPredicted RBP4.41□□□□□ -1.7
LINC01109-201ENST00000603837 PEX12O00623 359 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 CCSO14618 274 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 SNAI2O43623 268 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 KIAA0513O60268 411 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 SDC3O75056 442 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 TULP3O75386 442 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 GPR32O75388 356 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 CLEC3AO75596 197 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 C1QAP02745 245 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 HIST1H2AGP0C0S8 130 aaPredicted RBP4.41□□□□□ -1.7
LINC01109-201ENST00000603837 DUX4L2P0CJ85 424 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 DUX4L3P0CJ86 424 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 DUX4L4P0CJ87 422 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 DUX4L5P0CJ88 424 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 DUX4L6P0CJ89 424 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 DUX4L7P0CJ90 424 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 CEACAM1P13688 526 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 HSD17B1P14061 328 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 HIST1H2ADP20671 130 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 PRKCHP24723 683 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 SDHAP31040 664 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 GRK5P34947 590 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 RPL22P35268 128 aaKnown RBP4.41□□□□□ -1.7
LINC01109-201ENST00000603837 RPL14P50914 215 aaKnown RBP4.41□□□□□ -1.7
LINC01109-201ENST00000603837 KCNQ1P51787 676 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 FGF8P55075 233 aaPredicted RBP4.41□□□□□ -1.7
LINC01109-201ENST00000603837 AP3S2P59780 193 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 ELAVL2Q12926 359 aaKnown RBP4.41□□□□□ -1.7
LINC01109-201ENST00000603837 TOMM34Q15785 309 aaPredicted RBP4.41□□□□□ -1.7
LINC01109-201ENST00000603837 SPDYE7PQ495Y7 208 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 RAB41Q5JT25 222 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 C9orf50Q5SZB4 431 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 GPRC6AQ5T6X5 926 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 TRIQKQ629K1 86 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 BICRALQ6AI39 1079 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 HIST2H2AA3Q6FI13 130 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 DHRS7BQ6IAN0 325 aaPredicted RBP4.41□□□□□ -1.7
LINC01109-201ENST00000603837 LRRC70Q7Z2Q7 622 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 SMIM15Q7Z3B0 74 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 CCDC71Q8IV32 467 aaPredicted RBP4.41□□□□□ -1.7
LINC01109-201ENST00000603837 LAX1Q8IWV1 398 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 ARHGAP12Q8IWW6 846 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 PDZD9Q8IXQ8 264 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 BATF2Q8N1L9 274 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 PRSS35Q8N3Z0 413 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 FTMTQ8N4E7 242 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 SPATA6LQ8N4H0 392 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 DUSP18Q8NEJ0 188 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 SPATA22Q8NHS9 363 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 SUN3Q8TAQ9 357 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 ACOT11Q8WXI4 607 aaPredicted RBP4.41□□□□□ -1.7
LINC01109-201ENST00000603837 TFAP2BQ92481 460 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 SCRN2Q96FV2 425 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 HIST1H2AHQ96KK5 128 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 ZNF599Q96NL3 588 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 HIST1H2AJQ99878 128 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 MARVELD1Q9BSK0 173 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 SUCNR1Q9BXA5 334 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 FTHL17Q9BXU8 183 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 PRDM7Q9NQW5 492 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 SMPD4Q9NXE4 827 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 CCDC167Q9P0B6 97 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 DUX4Q9UBX2 424 aa4.41□□□□□ -1.7
LINC01109-201ENST00000603837 ADAMTSL1Q8N6G6 1762 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 ANKRD31Q8N7Z5 1873 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 TRAV25A0A0B4J276 109 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 KDM4EB2RXH2 506 aaPredicted RBP4.4□□□□□ -1.7
LINC01109-201ENST00000603837 NPIPB8E9PQR5 432 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 TSTD3H0UI37 97 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 K7ERI5 159 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 QSOX1O00391 747 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 ITGB1BP1O14713 200 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 ADAMDEC1O15204 470 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 CLIC2O15247 247 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 DPM1O60762 260 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 TBX19O60806 448 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 CILPO75339 1184 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 RGS11O94810 467 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 PROSCO94903 275 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 KAT7O95251 611 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 SIX6O95475 246 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 PRAMEF1O95521 474 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 NDUFB10O96000 172 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms