RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 EBF4Q9BQW3 602 aa16.62■□□□□ 0.25
SHKBP1-202ENST00000593764 ACBD3Q9H3P7 528 aa16.62■□□□□ 0.25
SHKBP1-202ENST00000593764 RNF122Q9H9V4 155 aa16.62■□□□□ 0.25
SHKBP1-202ENST00000593764 SLC24A3Q9HC58 644 aa16.62■□□□□ 0.25
SHKBP1-202ENST00000593764 INTS9Q9NV88 658 aaKnown RBP16.62■□□□□ 0.25
SHKBP1-202ENST00000593764 STOML1Q9UBI4 398 aa16.62■□□□□ 0.25
SHKBP1-202ENST00000593764 FOXD3Q9UJU5 478 aaPredicted RBP16.62■□□□□ 0.25
SHKBP1-202ENST00000593764 ZNF175Q9Y473 711 aa16.62■□□□□ 0.25
SHKBP1-202ENST00000593764 EIF1AYO14602 144 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-202ENST00000593764 ADAMDEC1O15204 470 aa16.61■□□□□ 0.25
SHKBP1-202ENST00000593764 ZNF264O43296 627 aa16.61■□□□□ 0.25
SHKBP1-202ENST00000593764 KIAA0513O60268 411 aa16.61■□□□□ 0.25
SHKBP1-202ENST00000593764 EIF4E2O60573 245 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-202ENST00000593764 DNAJA2O60884 412 aa16.61■□□□□ 0.25
SHKBP1-202ENST00000593764 CRHP06850 196 aa16.61■□□□□ 0.25
SHKBP1-202ENST00000593764 EIF1P41567 113 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-202ENST00000593764 KHKP50053 298 aa16.61■□□□□ 0.25
SHKBP1-202ENST00000593764 RPS3AP61247 264 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-202ENST00000593764 FOXF1Q12946 379 aa16.61■□□□□ 0.25
SHKBP1-202ENST00000593764 PON3Q15166 354 aa16.61■□□□□ 0.25
SHKBP1-202ENST00000593764 COX20Q5RI15 118 aa16.61■□□□□ 0.25
SHKBP1-202ENST00000593764 FRRS1Q6ZNA5 592 aa16.61■□□□□ 0.25
SHKBP1-202ENST00000593764 P4HA3Q7Z4N8 544 aa16.61■□□□□ 0.25
SHKBP1-202ENST00000593764 MIER2Q8N344 545 aa16.61■□□□□ 0.25
SHKBP1-202ENST00000593764 GOLGA6L1Q8N7Z2 621 aa16.61■□□□□ 0.25
SHKBP1-202ENST00000593764 OR5W2Q8NH69 310 aa16.61■□□□□ 0.25
SHKBP1-202ENST00000593764 STARD4Q96DR4 205 aa16.61■□□□□ 0.25
SHKBP1-202ENST00000593764 ARSGQ96EG1 525 aa16.61■□□□□ 0.25
SHKBP1-202ENST00000593764 TMEM185BQ9H7F4 350 aa16.61■□□□□ 0.25
SHKBP1-202ENST00000593764 TCF7L2Q9NQB0 619 aa16.61■□□□□ 0.25
SHKBP1-202ENST00000593764 POLE3Q9NRF9 147 aa16.61■□□□□ 0.25
SHKBP1-202ENST00000593764 WDR45Q9Y484 360 aa16.61■□□□□ 0.25
SHKBP1-202ENST00000593764 A0A0J9YW62 118 aa16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 RFXANKO14593 260 aa16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 AQP8O94778 261 aa16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 NTN1O95631 604 aa16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 NUDT14O95848 222 aa16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 UBL4AP11441 157 aa16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 PRKCAP17252 672 aa16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 ADH6P28332 368 aa16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 SHC1P29353 583 aa16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 KIR2DL2P43627 348 aaPredicted RBP16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 KIR2DL3P43628 341 aa16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 SLC6A8P48029 635 aa16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 MRPL19P49406 292 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 POLR2JP52435 117 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 MVDP53602 400 aa16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 EEF1A1P68104 462 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 SKP2Q13309 424 aa16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 EEF1A1P5Q5VTE0 462 aa16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 OR2A2Q6IF42 318 aa16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 LILRA2Q8N149 483 aa16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 OR10D3Q8NH80 312 aa16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 FBXO27Q8NI29 283 aa16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 ZFP90Q8TF47 636 aa16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 DYDC1Q8WWB3 177 aa16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 CKAP2Q8WWK9 683 aa16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 VPS33AQ96AX1 596 aa16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 LRRC46Q96FV0 321 aa16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 ZNF559Q9BR84 538 aa16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 LAT2Q9GZY6 243 aa16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 PIGMQ9H3S5 423 aa16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 CRIM1Q9NZV1 1036 aa16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 GPC6Q9Y625 555 aaPredicted RBP16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 OTOGQ6ZRI0 2925 aa16.6■□□□□ 0.25
SHKBP1-202ENST00000593764 A8MXE2 369 aa16.59■□□□□ 0.25
SHKBP1-202ENST00000593764 ETV2O00321 342 aaPredicted RBP16.59■□□□□ 0.25
SHKBP1-202ENST00000593764 BCAS1O75363 584 aaPredicted RBP16.59■□□□□ 0.25
SHKBP1-202ENST00000593764 H6PDO95479 791 aa16.59■□□□□ 0.25
SHKBP1-202ENST00000593764 ZCCHC18P0CG32 403 aa16.59■□□□□ 0.25
SHKBP1-202ENST00000593764 PEX19P40855 299 aa16.59■□□□□ 0.25
SHKBP1-202ENST00000593764 EIF1AXP47813 144 aaKnown RBP16.59■□□□□ 0.25
SHKBP1-202ENST00000593764 CHRNEQ04844 493 aa16.59■□□□□ 0.25
SHKBP1-202ENST00000593764 MYBPHQ13203 477 aa16.59■□□□□ 0.25
SHKBP1-202ENST00000593764 FGFBP1Q14512 234 aa16.59■□□□□ 0.25
SHKBP1-202ENST00000593764 GUSBP1Q15486 140 aa16.59■□□□□ 0.25
SHKBP1-202ENST00000593764 SYPL1Q16563 259 aa16.59■□□□□ 0.25
SHKBP1-202ENST00000593764 SGCBQ16585 318 aa16.59■□□□□ 0.25
SHKBP1-202ENST00000593764 SLC25A53Q5H9E4 307 aa16.59■□□□□ 0.25
SHKBP1-202ENST00000593764 VWA1Q6PCB0 445 aa16.59■□□□□ 0.25
SHKBP1-202ENST00000593764 MSANTD1Q6ZTZ1 278 aa16.59■□□□□ 0.25
SHKBP1-202ENST00000593764 ESPNLQ6ZVH7 1005 aa16.59■□□□□ 0.25
SHKBP1-202ENST00000593764 BTLAQ7Z6A9 289 aa16.59■□□□□ 0.25
SHKBP1-202ENST00000593764 LUZP2Q86TE4 346 aa16.59■□□□□ 0.25
SHKBP1-202ENST00000593764 ZNF619Q8N2I2 560 aa16.59■□□□□ 0.25
SHKBP1-202ENST00000593764 ANKFN1Q8N957 763 aa16.59■□□□□ 0.25
SHKBP1-202ENST00000593764 OR2V1Q8NHB1 315 aa16.59■□□□□ 0.25
SHKBP1-202ENST00000593764 RFWD2Q8NHY2 731 aa16.59■□□□□ 0.25
SHKBP1-202ENST00000593764 PNPT1Q8TCS8 783 aaKnown RBP16.59■□□□□ 0.25
SHKBP1-202ENST00000593764 OIT3Q8WWZ8 545 aa16.59■□□□□ 0.25
SHKBP1-202ENST00000593764 TRNT1Q96Q11 434 aaKnown RBP16.59■□□□□ 0.25
SHKBP1-202ENST00000593764 CCDC28BQ9BUN5 200 aa16.59■□□□□ 0.25
SHKBP1-202ENST00000593764 RBM24Q9BX46 236 aaKnown RBP16.59■□□□□ 0.25
SHKBP1-202ENST00000593764 SLC38A1Q9H2H9 487 aa16.59■□□□□ 0.25
SHKBP1-202ENST00000593764 FAM234BA2RU67 622 aa16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 TNFSF11O14788 317 aa16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 POLR3GO15318 223 aaPredicted RBP16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 CXCL13O43927 109 aa16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 CSTAP01040 98 aa16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 CGAP01215 116 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms