RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 TMCO5AQ8N6Q1 288 aa15.04■□□□□ -0
USB1-211ENST00000565662 GOLGA6L1Q8N7Z2 621 aa15.04■□□□□ -0
USB1-211ENST00000565662 GATSQ8NAP1 163 aa15.04■□□□□ -0
USB1-211ENST00000565662 OR10D3Q8NH80 312 aa15.04■□□□□ -0
USB1-211ENST00000565662 FNDC9Q8TBE3 224 aa15.04■□□□□ -0
USB1-211ENST00000565662 SLC25A43Q8WUT9 341 aaPredicted RBP15.04■□□□□ -0
USB1-211ENST00000565662 TLCD1Q96CP7 247 aa15.04■□□□□ -0
USB1-211ENST00000565662 STARD4Q96DR4 205 aa15.04■□□□□ -0
USB1-211ENST00000565662 ADGRG7Q96K78 797 aa15.04■□□□□ -0
USB1-211ENST00000565662 PPP1R36Q96LQ0 422 aa15.04■□□□□ -0
USB1-211ENST00000565662 FOXC2Q99958 501 aa15.04■□□□□ -0
USB1-211ENST00000565662 C20orf27Q9GZN8 174 aa15.04■□□□□ -0
USB1-211ENST00000565662 RMND5AQ9H871 391 aa15.04■□□□□ -0
USB1-211ENST00000565662 TMBIM4Q9HC24 238 aa15.04■□□□□ -0
USB1-211ENST00000565662 ARGLU1Q9NWB6 273 aaPredicted RBP15.04■□□□□ -0
USB1-211ENST00000565662 MARCOQ9UEW3 520 aaPredicted RBP15.04■□□□□ -0
USB1-211ENST00000565662 ICAM5Q9UMF0 924 aa15.04■□□□□ -0
USB1-211ENST00000565662 WDR45Q9Y484 360 aa15.04■□□□□ -0
USB1-211ENST00000565662 NUP214P35658 2090 aaPredicted RBP15.04■□□□□ -0
USB1-211ENST00000565662 SERINC4A6NH21 518 aa15.03■□□□□ -0
USB1-211ENST00000565662 KIAA0513O60268 411 aa15.03■□□□□ -0
USB1-211ENST00000565662 KRT75O95678 551 aa15.03■□□□□ -0
USB1-211ENST00000565662 UQCRBP14927 111 aa15.03■□□□□ -0
USB1-211ENST00000565662 PSMA4P25789 261 aaKnown RBP15.03■□□□□ -0
USB1-211ENST00000565662 SLC7A1P30825 629 aa15.03■□□□□ -0
USB1-211ENST00000565662 DNAJA1P31689 397 aaKnown RBP15.03■□□□□ -0
USB1-211ENST00000565662 SLC6A8P48029 635 aa15.03■□□□□ -0
USB1-211ENST00000565662 KCNJ5P48544 419 aa15.03■□□□□ -0
USB1-211ENST00000565662 SUCLG1P53597 346 aaKnown RBP15.03■□□□□ -0
USB1-211ENST00000565662 MPP2Q14168 576 aa15.03■□□□□ -0
USB1-211ENST00000565662 GUSBP1Q15486 140 aa15.03■□□□□ -0
USB1-211ENST00000565662 CD226Q15762 336 aa15.03■□□□□ -0
USB1-211ENST00000565662 ZSWIM7Q19AV6 140 aa15.03■□□□□ -0
USB1-211ENST00000565662 PDCD4Q53EL6 469 aaKnown RBP15.03■□□□□ -0
USB1-211ENST00000565662 SPANXN4Q5MJ08 99 aa15.03■□□□□ -0
USB1-211ENST00000565662 BEND4Q6ZU67 534 aa15.03■□□□□ -0
USB1-211ENST00000565662 ZAR1Q86SH2 424 aa15.03■□□□□ -0
USB1-211ENST00000565662 GALNT10Q86SR1 603 aa15.03■□□□□ -0
USB1-211ENST00000565662 LILRA2Q8N149 483 aa15.03■□□□□ -0
USB1-211ENST00000565662 FIG4Q92562 907 aa15.03■□□□□ -0
USB1-211ENST00000565662 MAELQ96JY0 434 aaKnown RBP15.03■□□□□ -0
USB1-211ENST00000565662 PANX1Q96RD7 426 aa15.03■□□□□ -0
USB1-211ENST00000565662 SLC35A5Q9BS91 424 aa15.03■□□□□ -0
USB1-211ENST00000565662 LAT2Q9GZY6 243 aa15.03■□□□□ -0
USB1-211ENST00000565662 CACYBPQ9HB71 228 aaKnown RBP15.03■□□□□ -0
USB1-211ENST00000565662 EXOSC3Q9NQT5 275 aaKnown RBP15.03■□□□□ -0
USB1-211ENST00000565662 CALML5Q9NZT1 146 aa15.03■□□□□ -0
USB1-211ENST00000565662 ZIM2Q9NZV7 527 aa15.03■□□□□ -0
USB1-211ENST00000565662 ST6GALNAC2Q9UJ37 374 aa15.03■□□□□ -0
USB1-211ENST00000565662 TESMINQ9Y4I5 508 aa15.03■□□□□ -0
USB1-211ENST00000565662 PDZD2O15018 2839 aa15.03■□□□□ -0
USB1-211ENST00000565662 TMEM247A6NEH6 219 aa15.02■□□□□ -0
USB1-211ENST00000565662 SDHDO14521 159 aa15.02■□□□□ -0
USB1-211ENST00000565662 SCN2BO60939 215 aa15.02■□□□□ -0
USB1-211ENST00000565662 TGDSO95455 350 aa15.02■□□□□ -0
USB1-211ENST00000565662 CSTAP01040 98 aa15.02■□□□□ -0
USB1-211ENST00000565662 KIR2DL2P43627 348 aaPredicted RBP15.02■□□□□ -0
USB1-211ENST00000565662 MAP2K6P52564 334 aa15.02■□□□□ -0
USB1-211ENST00000565662 AGFG1P52594 562 aaKnown RBP15.02■□□□□ -0
USB1-211ENST00000565662 WDR4P57081 412 aaKnown RBP15.02■□□□□ -0
USB1-211ENST00000565662 CARD18P57730 90 aa15.02■□□□□ -0
USB1-211ENST00000565662 KRTAP10-9P60411 292 aa15.02■□□□□ -0
USB1-211ENST00000565662 PPP4R4Q6NUP7 873 aa15.02■□□□□ -0
USB1-211ENST00000565662 CLECL1Q8IZS7 167 aa15.02■□□□□ -0
USB1-211ENST00000565662 ZNF619Q8N2I2 560 aa15.02■□□□□ -0
USB1-211ENST00000565662 OR5D16Q8NGK9 328 aa15.02■□□□□ -0
USB1-211ENST00000565662 ZFP90Q8TF47 636 aa15.02■□□□□ -0
USB1-211ENST00000565662 MBD6Q96DN6 1003 aa15.02■□□□□ -0
USB1-211ENST00000565662 OTUB1Q96FW1 271 aaPredicted RBP15.02■□□□□ -0
USB1-211ENST00000565662 ALPK1Q96QP1 1244 aa15.02■□□□□ -0
USB1-211ENST00000565662 SAP130Q9H0E3 1048 aa15.02■□□□□ -0
USB1-211ENST00000565662 OR51I1Q9H343 314 aa15.02■□□□□ -0
USB1-211ENST00000565662 PLSCR4Q9NRQ2 329 aa15.02■□□□□ -0
USB1-211ENST00000565662 PNPOQ9NVS9 261 aa15.02■□□□□ -0
USB1-211ENST00000565662 ITGB1BP2Q9UKP3 347 aa15.02■□□□□ -0
USB1-211ENST00000565662 CARD8Q9Y2G2 431 aa15.02■□□□□ -0
USB1-211ENST00000565662 CCDC168Q8NDH2 2452 aa15.02□□□□□ -0.01
USB1-211ENST00000565662 CSMD2Q7Z408 3487 aa15.01□□□□□ -0.01
USB1-211ENST00000565662 OTOGQ6ZRI0 2925 aa15.01□□□□□ -0.01
USB1-211ENST00000565662 C17orf51A8MQB3 221 aa15.01□□□□□ -0.01
USB1-211ENST00000565662 C16orf97H3BN30 126 aa15.01□□□□□ -0.01
USB1-211ENST00000565662 DNPH1O43598 174 aa15.01□□□□□ -0.01
USB1-211ENST00000565662 GMFGO60234 142 aa15.01□□□□□ -0.01
USB1-211ENST00000565662 DNAJA2O60884 412 aa15.01□□□□□ -0.01
USB1-211ENST00000565662 CPSF4O95639 269 aaKnown RBP15.01□□□□□ -0.01
USB1-211ENST00000565662 RAF1P04049 648 aa15.01□□□□□ -0.01
USB1-211ENST00000565662 PRKCAP17252 672 aa15.01□□□□□ -0.01
USB1-211ENST00000565662 HTR3AP46098 478 aa15.01□□□□□ -0.01
USB1-211ENST00000565662 CCR4P51679 360 aa15.01□□□□□ -0.01
USB1-211ENST00000565662 CSNK2A1P68400 391 aaPredicted RBP15.01□□□□□ -0.01
USB1-211ENST00000565662 FOXF1Q12946 379 aa15.01□□□□□ -0.01
USB1-211ENST00000565662 TESK1Q15569 626 aa15.01□□□□□ -0.01
USB1-211ENST00000565662 GPR68Q15743 365 aa15.01□□□□□ -0.01
USB1-211ENST00000565662 ZNF239Q16600 458 aaKnown RBP15.01□□□□□ -0.01
USB1-211ENST00000565662 CTU2Q2VPK5 515 aaKnown RBP15.01□□□□□ -0.01
USB1-211ENST00000565662 TMEM201Q5SNT2 666 aa15.01□□□□□ -0.01
USB1-211ENST00000565662 PDZK1Q5T2W1 519 aa15.01□□□□□ -0.01
USB1-211ENST00000565662 NXNQ6DKJ4 435 aa15.01□□□□□ -0.01
USB1-211ENST00000565662 PAMR1Q6UXH9 720 aa15.01□□□□□ -0.01
USB1-211ENST00000565662 CDC20BQ86Y33 519 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms