RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 C7orf57Q8NEG2 295 aa4.54□□□□□ -1.68
R3HDM1-216ENST00000483065 OR8J2Q8NGG1 315 aa4.54□□□□□ -1.68
R3HDM1-216ENST00000483065 OR1J1Q8NGS3 322 aa4.54□□□□□ -1.68
R3HDM1-216ENST00000483065 TMEM174Q8WUU8 243 aa4.54□□□□□ -1.68
R3HDM1-216ENST00000483065 CAPSLQ8WWF8 208 aa4.54□□□□□ -1.68
R3HDM1-216ENST00000483065 NR4A3Q92570 626 aa4.54□□□□□ -1.68
R3HDM1-216ENST00000483065 UBE2E3Q969T4 207 aa4.54□□□□□ -1.68
R3HDM1-216ENST00000483065 DACT3Q96B18 629 aaPredicted RBP4.54□□□□□ -1.68
R3HDM1-216ENST00000483065 NXPE2Q96DL1 559 aa4.54□□□□□ -1.68
R3HDM1-216ENST00000483065 TIMD4Q96H15 378 aa4.54□□□□□ -1.68
R3HDM1-216ENST00000483065 PCED1BQ96HM7 432 aa4.54□□□□□ -1.68
R3HDM1-216ENST00000483065 C10orf90Q96M02 699 aa4.54□□□□□ -1.68
R3HDM1-216ENST00000483065 CPXM1Q96SM3 734 aa4.54□□□□□ -1.68
R3HDM1-216ENST00000483065 MBOAT4Q96T53 435 aa4.54□□□□□ -1.68
R3HDM1-216ENST00000483065 SH2D3AQ9BRG2 576 aa4.54□□□□□ -1.68
R3HDM1-216ENST00000483065 ZNF251Q9BRH9 671 aa4.54□□□□□ -1.68
R3HDM1-216ENST00000483065 NIPSNAP3BQ9BS92 247 aa4.54□□□□□ -1.68
R3HDM1-216ENST00000483065 LRRC1Q9BTT6 524 aa4.54□□□□□ -1.68
R3HDM1-216ENST00000483065 OPN3Q9H1Y3 402 aaPredicted RBP4.54□□□□□ -1.68
R3HDM1-216ENST00000483065 GBA3Q9H227 469 aa4.54□□□□□ -1.68
R3HDM1-216ENST00000483065 OR51V1Q9H2C8 321 aa4.54□□□□□ -1.68
R3HDM1-216ENST00000483065 BICC1Q9H694 974 aaKnown RBP4.54□□□□□ -1.68
R3HDM1-216ENST00000483065 ALG9Q9H6U8 611 aa4.54□□□□□ -1.68
R3HDM1-216ENST00000483065 ZNF703Q9H7S9 590 aaPredicted RBP4.54□□□□□ -1.68
R3HDM1-216ENST00000483065 SAMSN1Q9NSI8 373 aaKnown RBP4.54□□□□□ -1.68
R3HDM1-216ENST00000483065 SIX4Q9UIU6 781 aa4.54□□□□□ -1.68
R3HDM1-216ENST00000483065 PACSIN3Q9UKS6 424 aa4.54□□□□□ -1.68
R3HDM1-216ENST00000483065 HYOU1Q9Y4L1 999 aa4.54□□□□□ -1.68
R3HDM1-216ENST00000483065 TEX13DA0A0J9YY54 714 aaPredicted RBP4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 ZNF503-AS2A6NEH8 195 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 FAM74A7A6NL05 159 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 PP2D1A8MPX8 630 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 H7C0C1 242 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 RAMP3O60896 148 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 VAPBO95292 243 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 HLA-HP01893 362 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 ATP1B1P05026 303 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 ACAA1P09110 424 aaPredicted RBP4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 RNH1P13489 461 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 HMGB2P26583 209 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 GCAP28676 217 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 SLC1A2P43004 574 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 PGFP49763 221 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 DNA2P51530 1060 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 ERVK-25P63136 954 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 KDSRQ06136 332 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 RGS1Q08116 209 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 SF3B4Q15427 424 aaKnown RBP eCLIP4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 FAM74A3Q4VXF1 159 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 C5orf47Q569G3 176 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 TTMPQ5BVD1 217 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 TMEM31Q5JXX7 168 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 REEP3Q6NUK4 255 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 PRMT9Q6P2P2 845 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 LEKR1Q6ZMV7 388 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 CATSPERDQ86XM0 798 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 CRLF3Q8IUI8 442 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 POC1AQ8NBT0 407 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 SDR9C7Q8NEX9 313 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 OR4F6Q8NGB9 312 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 OR6N2Q8NGY6 317 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 ENKURQ8TC29 256 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 ART4Q93070 314 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 OPTNQ96CV9 577 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 DNAJC1Q96KC8 554 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 FMO2Q99518 471 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 UPF3BQ9BZI7 483 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 SRRQ9GZT4 340 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 MAP6D1Q9H9H5 199 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 POPDC2Q9HBU9 364 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 CD209Q9NNX6 404 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 FZD3Q9NPG1 666 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 KRCC1Q9NPI7 259 aaPredicted RBP4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 OR2S2Q9NQN1 319 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 DCAF13Q9NV06 445 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 FKBP14Q9NWM8 211 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 IL36GQ9NZH8 169 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 NAGKQ9UJ70 344 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 ZNF221Q9UK13 617 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 POMT2Q9UKY4 750 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 TMCO1Q9UM00 188 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 KLHDC2Q9Y2U9 406 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 TNFRSF18Q9Y5U5 241 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 SYNJ2O15056 1496 aa4.53□□□□□ -1.68
R3HDM1-216ENST00000483065 TRBV9A0A0B4J1U6 114 aa4.52□□□□□ -1.69
R3HDM1-216ENST00000483065 IGHV4-28A0A0C4DH34 117 aa4.52□□□□□ -1.69
R3HDM1-216ENST00000483065 CENPVL1A0A0U1RR11 272 aa4.52□□□□□ -1.69
R3HDM1-216ENST00000483065 J3KR12 359 aa4.52□□□□□ -1.69
R3HDM1-216ENST00000483065 OVOL3O00110 214 aa4.52□□□□□ -1.69
R3HDM1-216ENST00000483065 IMPA2O14732 288 aa4.52□□□□□ -1.69
R3HDM1-216ENST00000483065 SCAMP2O15127 329 aaKnown RBP4.52□□□□□ -1.69
R3HDM1-216ENST00000483065 EMC8O43402 210 aa4.52□□□□□ -1.69
R3HDM1-216ENST00000483065 TRAPPC3O43617 180 aa4.52□□□□□ -1.69
R3HDM1-216ENST00000483065 AIREO43918 545 aa4.52□□□□□ -1.69
R3HDM1-216ENST00000483065 NDUFS6O75380 124 aaKnown RBP4.52□□□□□ -1.69
R3HDM1-216ENST00000483065 UGT2B17O75795 530 aa4.52□□□□□ -1.69
R3HDM1-216ENST00000483065 RBBP9O75884 186 aa4.52□□□□□ -1.69
R3HDM1-216ENST00000483065 ESRRBO95718 433 aa4.52□□□□□ -1.69
R3HDM1-216ENST00000483065 P04436 131 aa4.52□□□□□ -1.69
R3HDM1-216ENST00000483065 RPSAP08865 295 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms