RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 SKP2Q13309 424 aa12.04□□□□□ -0.48
HDAC1-208ENST00000482310 VEZF1Q14119 521 aa12.04□□□□□ -0.48
HDAC1-208ENST00000482310 CYBRD1Q53TN4 286 aa12.04□□□□□ -0.48
HDAC1-208ENST00000482310 ARSKQ6UWY0 536 aa12.04□□□□□ -0.48
HDAC1-208ENST00000482310 SLC22A16Q86VW1 577 aa12.04□□□□□ -0.48
HDAC1-208ENST00000482310 MISPQ8IVT2 679 aa12.04□□□□□ -0.48
HDAC1-208ENST00000482310 ULK2Q8IYT8 1036 aa12.04□□□□□ -0.48
HDAC1-208ENST00000482310 ZFP62Q8NB50 900 aaPredicted RBP12.04□□□□□ -0.48
HDAC1-208ENST00000482310 PINK1Q9BXM7 581 aa12.04□□□□□ -0.48
HDAC1-208ENST00000482310 LRMDAQ9H2I8 198 aa12.04□□□□□ -0.48
HDAC1-208ENST00000482310 SLC6A15Q9H2J7 730 aa12.04□□□□□ -0.48
HDAC1-208ENST00000482310 EXO5Q9H790 373 aa12.04□□□□□ -0.48
HDAC1-208ENST00000482310 ASF1BQ9NVP2 202 aa12.04□□□□□ -0.48
HDAC1-208ENST00000482310 DNAJB12Q9NXW2 375 aaKnown RBP12.04□□□□□ -0.48
HDAC1-208ENST00000482310 NPIPA1Q9UND3 350 aa12.04□□□□□ -0.48
HDAC1-208ENST00000482310 SLC35A3Q9Y2D2 325 aa12.04□□□□□ -0.48
HDAC1-208ENST00000482310 CHST2Q9Y4C5 530 aa12.04□□□□□ -0.48
HDAC1-208ENST00000482310 SNX13Q9Y5W8 968 aa12.04□□□□□ -0.48
HDAC1-208ENST00000482310 CDHR4A6H8M9 788 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 FAM47E-STBD1D6RA91 191 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 GSC2O15499 205 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 GLSO94925 669 aaPredicted RBP12.03□□□□□ -0.48
HDAC1-208ENST00000482310 PRG2P13727 222 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 HK1P19367 917 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 CD247P20963 164 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 ATP6V1B2P21281 511 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 ELAVL4P26378 380 aaKnown RBP12.03□□□□□ -0.48
HDAC1-208ENST00000482310 MST1P26927 711 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 DPP4P27487 766 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 P2RX1P51575 399 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 ZNF41P51814 821 aaPredicted RBP12.03□□□□□ -0.48
HDAC1-208ENST00000482310 FOXK1P85037 733 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 HSF1Q00613 529 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 FOXD4Q12950 439 aaPredicted RBP12.03□□□□□ -0.48
HDAC1-208ENST00000482310 TOMM34Q15785 309 aaPredicted RBP12.03□□□□□ -0.48
HDAC1-208ENST00000482310 INAQ16352 499 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 ZSCAN26Q16670 478 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 DUSP7Q16829 419 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 EIPR1Q53HC9 387 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 WIPI1Q5MNZ9 446 aaPredicted RBP12.03□□□□□ -0.48
HDAC1-208ENST00000482310 RAET1LQ5VY80 246 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 POMZP3Q6PJE2 187 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 CCDC80Q76M96 950 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 PRICKLE2Q7Z3G6 844 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 VTCN1Q7Z7D3 282 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 SPPL2CQ8IUH8 684 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 FADS6Q8N9I5 356 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 FAM83FQ8NEG4 500 aaPredicted RBP12.03□□□□□ -0.48
HDAC1-208ENST00000482310 GPR32P1Q8NGA4 272 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 OR14L1PQ8NHC6 308 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 ZNF563Q8TA94 476 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 SNRNP40Q96DI7 357 aaKnown RBP12.03□□□□□ -0.48
HDAC1-208ENST00000482310 WFDC6Q9BQY6 131 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 LAT2Q9GZY6 243 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 LDAHQ9H6V9 325 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 PTGES2Q9H7Z7 377 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 CTPS2Q9NRF8 586 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 OLAHQ9NV23 265 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 MAGEL2Q9UJ55 1249 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 SLC6A5Q9Y345 797 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 SPTA1P02549 2419 aa12.03□□□□□ -0.48
HDAC1-208ENST00000482310 ANKUB1A6NFN9 424 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 ADAM11O75078 769 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 EPPINO95925 133 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 IFNA14P01570 189 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 CRYABP02511 175 aaKnown RBP12.02□□□□□ -0.49
HDAC1-208ENST00000482310 FESP07332 822 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 PRKAR1BP31321 381 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 OR1E2P47887 323 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 RGS8P57771 180 aaPredicted RBP12.02□□□□□ -0.49
HDAC1-208ENST00000482310 MS4A2Q01362 244 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 BNIP2Q12982 314 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 CBFBQ13951 182 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 RNF220Q5VTB9 566 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 RPUSD3Q6P087 351 aaKnown RBP12.02□□□□□ -0.49
HDAC1-208ENST00000482310 DHRS4L2Q6PKH6 230 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 LACC1Q8IV20 430 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 ARHGAP24Q8N264 748 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 CADM2Q8N3J6 435 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 FAM109AQ8N4B1 249 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 LSM14AQ8ND56 463 aaKnown RBP12.02□□□□□ -0.49
HDAC1-208ENST00000482310 TOR1AIP2Q8NFQ8 470 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 RNF217Q8TC41 542 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 CPT1CQ8TCG5 803 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 PROX1Q92786 737 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 PMM1Q92871 262 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 C1GALT1C1Q96EU7 318 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 HSH2DQ96JZ2 352 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 NSMCE2Q96MF7 247 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 NPAS1Q99742 590 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 PRR14Q9BWN1 585 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 ARMC7Q9H6L4 198 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 ADPRHL2Q9NX46 363 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 KLHL28Q9NXS3 571 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 TNFRSF10DQ9UBN6 386 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 ANAPC2Q9UJX6 822 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 SH3GLB1Q9Y371 365 aa12.02□□□□□ -0.49
HDAC1-208ENST00000482310 ARHGAP21Q5T5U3 1957 aa12.01□□□□□ -0.49
HDAC1-208ENST00000482310 CFAP73A6NFT4 308 aa12.01□□□□□ -0.49
HDAC1-208ENST00000482310 SUV39H1O43463 412 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms