RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 MT-ND5P03915 603 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 SLC2A2P11168 524 aaPredicted RBP11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 POLR2CP19387 275 aaPredicted RBP11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 APEX1P27695 318 aaKnown RBP11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 BMP8BP34820 402 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 RFX3P48380 749 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 CLDN20P56880 219 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 IGLV3-21P80748 117 aaPredicted RBP11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 KIR2DS5Q14953 304 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 QPRTQ15274 297 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 SF3B4Q15427 424 aaKnown RBP eCLIP11.59□□□□□ -0.551e-9■■■■■ 43.2
ECHDC1-209ENST00000454591 ZFP69Q49AA0 526 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 PLBD1Q6P4A8 553 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 DGLUCYQ7Z3D6 616 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 BMP8AQ7Z5Y6 402 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 LRRC28Q86X40 367 aaPredicted RBP11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 KLBQ86Z14 1044 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 OR4N4Q8N0Y3 316 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 Q8N402 240 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 TMEM99Q8N816 258 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 ZFP41Q8N8Y5 198 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 SLC37A3Q8NCC5 494 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 CCL4L1Q8NHW4 92 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 OIT3Q8WWZ8 545 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 FAM3CQ92520 227 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 PTP4A1Q93096 173 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 TSACCQ96A04 125 aaPredicted RBP11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 ANKRD9Q96BM1 317 aaPredicted RBP11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 OTULINQ96BN8 352 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 MRPL38Q96DV4 380 aaKnown RBP11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 RNF31Q96EP0 1072 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 TEAD3Q99594 435 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 TTYH2Q9BSA4 534 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 MARVELD1Q9BSK0 173 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 TMED9Q9BVK6 235 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 HDHD5Q9BXW7 423 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 S1PR5Q9H228 398 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 TP63Q9H3D4 680 aaPredicted RBP11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 ZCCHC4Q9H5U6 513 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 TMEM27Q9HBJ8 222 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 TMEM74BQ9NUR3 256 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 MRPS2Q9Y399 296 aaKnown RBP11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 A0A1B0GTQ1 180 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 DAPL1A0PJW8 107 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 LRRC72A6NJI9 287 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 TTC36A6NLP5 189 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 CENPXA8MT69 81 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 FAM47E-STBD1D6RA91 191 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 PRR23D1E9PI22 279 aaPredicted RBP11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 CBX7O95931 251 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 EGFP01133 1207 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 SBK2P0C263 348 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 PRR23D2P0DMB1 279 aaPredicted RBP11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 PRKAR1AP10644 381 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 S1PR1P21453 382 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 DRD1P21728 446 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 AKT2P31751 481 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 THBS2P35442 1172 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 ATP6V1E1P36543 226 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 LSSP48449 732 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 BTG1P62324 171 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 ACTC1P68032 377 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 ACTA1P68133 377 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 HYAL1Q12794 435 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 ADAM15Q13444 863 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 FHL1Q13642 323 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 GGTLC2Q14390 218 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 CDK10Q15131 360 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 TAB1Q15750 504 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 ZNF141Q15928 474 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 ISXQ2M1V0 245 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 TBRG1Q3YBR2 411 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 CCNJQ5T5M9 372 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 TRIQKQ629K1 86 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 DMKNQ6E0U4 476 aaPredicted RBP11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 ABI3BPQ7Z7G0 1075 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 OR4N5Q8IXE1 308 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 CMIPQ8IY22 773 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 TMEM52Q8NDY8 209 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 C19orf18Q8NEA5 215 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 OR51G2Q8NGK0 314 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 OR5M3Q8NGP4 307 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 PFN4Q8NHR9 129 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 ENKURQ8TC29 256 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 MRGPRX1Q96LB2 322 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 CCNL2Q96S94 520 aaPredicted RBP11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 NDC1Q9BTX1 674 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 TRIM2Q9C040 744 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 TBC1D17Q9HA65 648 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 FOLH1BQ9HBA9 442 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 ADAP2Q9NPF8 381 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 MEPEQ9NQ76 525 aaPredicted RBP11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 C20orf141Q9NUB4 165 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 EVA1BQ9NVM1 165 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 COMMD3Q9UBI1 195 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 NOX1Q9Y5S8 564 aa11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 SIRT4Q9Y6E7 314 aaPredicted RBP11.58□□□□□ -0.56
ECHDC1-209ENST00000454591 CENPBD1B2RD01 187 aa11.57□□□□□ -0.56
ECHDC1-209ENST00000454591 NPIPB9F8W1W9 429 aa11.57□□□□□ -0.56
ECHDC1-209ENST00000454591 PEX12O00623 359 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms