RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 PPP2CAP67775 309 aa15.43■□□□□ 0.06
CACNA1A-258ENST00000638029 ATP6AP1Q15904 470 aa15.43■□□□□ 0.06
CACNA1A-258ENST00000638029 SMUG1Q53HV7 270 aa15.43■□□□□ 0.06
CACNA1A-258ENST00000638029 SKA3Q8IX90 412 aa15.43■□□□□ 0.06
CACNA1A-258ENST00000638029 SMG8Q8ND04 991 aaKnown RBP15.43■□□□□ 0.06
CACNA1A-258ENST00000638029 NR4A3Q92570 626 aa15.43■□□□□ 0.06
CACNA1A-258ENST00000638029 TCEAL2Q9H3H9 227 aaPredicted RBP15.43■□□□□ 0.06
CACNA1A-258ENST00000638029 SIT1Q9Y3P8 196 aa15.43■□□□□ 0.06
CACNA1A-258ENST00000638029 TBX10O75333 385 aa15.43■□□□□ 0.06
CACNA1A-258ENST00000638029 HBQ1P09105 142 aa15.43■□□□□ 0.06
CACNA1A-258ENST00000638029 SNHG28P0DPA3 235 aa15.43■□□□□ 0.06
CACNA1A-258ENST00000638029 BAXQ07812 192 aa15.43■□□□□ 0.06
CACNA1A-258ENST00000638029 BRICD5Q6PL45 260 aa15.43■□□□□ 0.06
CACNA1A-258ENST00000638029 Q6ZVL8 140 aa15.43■□□□□ 0.06
CACNA1A-258ENST00000638029 OR4N2Q8NGD1 307 aa15.43■□□□□ 0.06
CACNA1A-258ENST00000638029 ZNF419Q96HQ0 510 aaPredicted RBP15.43■□□□□ 0.06
CACNA1A-258ENST00000638029 PSD2Q9BQI7 771 aa15.43■□□□□ 0.06
CACNA1A-258ENST00000638029 SLC29A3Q9BZD2 475 aa15.43■□□□□ 0.06
CACNA1A-258ENST00000638029 SLC25A18Q9H1K4 315 aa15.43■□□□□ 0.06
CACNA1A-258ENST00000638029 SLC38A1Q9H2H9 487 aa15.43■□□□□ 0.06
CACNA1A-258ENST00000638029 OR7A17O14581 309 aa15.43■□□□□ 0.06
CACNA1A-258ENST00000638029 ETV4P43268 484 aa15.43■□□□□ 0.06
CACNA1A-258ENST00000638029 ART1P52961 327 aa15.43■□□□□ 0.06
CACNA1A-258ENST00000638029 KIAA0907Q7Z7F0 614 aaPredicted RBP15.43■□□□□ 0.06
CACNA1A-258ENST00000638029 CNN2Q99439 309 aaKnown RBP15.43■□□□□ 0.06
CACNA1A-258ENST00000638029 SEMA4CQ9C0C4 833 aa15.43■□□□□ 0.06
CACNA1A-258ENST00000638029 TM7SF3Q9NS93 570 aa15.43■□□□□ 0.06
CACNA1A-258ENST00000638029 ADGRB2O60241 1585 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 B3GALNT1O75752 331 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 C8BP07358 591 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 CXCL12P48061 93 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 GAB1Q13480 694 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 EXOSC2Q13868 293 aaKnown RBP15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 SPANXN4Q5MJ08 99 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 OR11L1Q8NGX0 322 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 OR6C1Q96RD1 312 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 RNF186Q9NXI6 227 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 DNAJB4Q9UDY4 337 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 UBR2Q8IWV8 1755 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 MANBAO00462 879 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 SOCS5O75159 536 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 ZNF728P0DKX0 622 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 HOXD8P13378 290 aaPredicted RBP15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 TACR3P29371 465 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 MAP2K3P46734 347 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 ZSWIM9Q86XI8 627 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 OR51D1Q8NGF3 324 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 AHSGP02765 367 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 NTSR1P30989 418 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 IL2RGP31785 369 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 TESK1Q15569 626 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 IER5LQ5T953 404 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 ACTR3BQ9P1U1 418 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 NWD2Q9ULI1 1742 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 CXorf49A8MYA2 514 aaPredicted RBP15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 KIAA0355O15063 1070 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 LDB3O75112 727 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 KBTBD6Q86V97 674 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 SCAMP4Q969E2 229 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 MON2Q7Z3U7 1717 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 TRAV18A0A075B6X5 111 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 EBLN1P0CF75 366 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 RPL23AP62750 156 aaKnown RBP15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 ZXDBP98169 803 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 ARL6IP1Q15041 203 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 TANGO2Q6ICL3 276 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 OR52P1PQ8NH57 321 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 PSMF1Q92530 271 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 OSBPL7Q9BZF2 842 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 REEP4Q9H6H4 257 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 EXOSC1Q9Y3B2 195 aaKnown RBP15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 LRRC42Q9Y546 428 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 C17orf105B2RV13 164 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 HOXB5P09067 269 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 M6PRP20645 277 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 TMEM150AQ86TG1 271 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 CNOT9Q92600 299 aaKnown RBP15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 TEPSINQ96N21 525 aa15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 DICER1Q9UPY3 1922 aaKnown RBP15.42■□□□□ 0.06
CACNA1A-258ENST00000638029 A6NIN4 97 aa15.41■□□□□ 0.06
CACNA1A-258ENST00000638029 HSD17B6O14756 317 aa15.41■□□□□ 0.06
CACNA1A-258ENST00000638029 ITGB2P05107 769 aa15.41■□□□□ 0.06
CACNA1A-258ENST00000638029 TPOP07202 933 aa15.41■□□□□ 0.06
CACNA1A-258ENST00000638029 PTGER1P34995 402 aa15.41■□□□□ 0.06
CACNA1A-258ENST00000638029 ZNF92Q03936 586 aa15.41■□□□□ 0.06
CACNA1A-258ENST00000638029 ARHGAP1Q07960 439 aa15.41■□□□□ 0.06
CACNA1A-258ENST00000638029 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.41■□□□□ 0.06
CACNA1A-258ENST00000638029 PLEKHS1Q5SXH7 462 aa15.41■□□□□ 0.06
CACNA1A-258ENST00000638029 ZNF516Q92618 1163 aa15.41■□□□□ 0.06
CACNA1A-258ENST00000638029 COQ10AQ96MF6 247 aa15.41■□□□□ 0.06
CACNA1A-258ENST00000638029 FZD8Q9H461 694 aa15.41■□□□□ 0.06
CACNA1A-258ENST00000638029 TRAPPC2LQ9UL33 140 aa15.41■□□□□ 0.06
CACNA1A-258ENST00000638029 KCTD3Q9Y597 815 aa15.41■□□□□ 0.06
CACNA1A-258ENST00000638029 A0A1W2PP18 115 aa15.41■□□□□ 0.06
CACNA1A-258ENST00000638029 NPPAP01160 153 aa15.41■□□□□ 0.06
CACNA1A-258ENST00000638029 TRAM1Q15629 374 aa15.41■□□□□ 0.06
CACNA1A-258ENST00000638029 SFT2D3Q587I9 215 aa15.41■□□□□ 0.06
CACNA1A-258ENST00000638029 LARP4Q71RC2 724 aaKnown RBP eCLIP15.41■□□□□ 0.06
CACNA1A-258ENST00000638029 LRRC57Q8N9N7 239 aa15.41■□□□□ 0.06
CACNA1A-258ENST00000638029 F2RL3Q96RI0 385 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms