RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 COX20Q5RI15 118 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 NSUN5P2Q63ZY6 315 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 BLOC1S3Q6QNY0 202 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 CBLN3Q6UW01 205 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 FUNDC1Q8IVP5 155 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 UBQLNLQ8IYU4 475 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 ZNF619Q8N2I2 560 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 TNIP2Q8NFZ5 429 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 MBD3L2Q8NHZ7 208 aaPredicted RBP11.66□□□□□ -0.54
COL5A1-206ENST00000465877 ZPLD1Q8TCW7 415 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 OIT3Q8WWZ8 545 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 SMPDL3BQ92485 455 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 GTF2H4Q92759 462 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 ZBTB8AQ96BR9 441 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 SPDL1Q96EA4 605 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 AURKBQ96GD4 344 aaPredicted RBP11.66□□□□□ -0.54
COL5A1-206ENST00000465877 KLHDC3Q9BQ90 382 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 ZNF385DQ9H6B1 395 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 POLE3Q9NRF9 147 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 MED17Q9NVC6 651 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 FGFR1OP2Q9NVK5 253 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 CLCF1Q9UBD9 225 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 KCNE5Q9UJ90 142 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 CARD8Q9Y2G2 431 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 DTNAQ9Y4J8 743 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 ITPR2Q14571 2701 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 FBN2P35556 2912 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 C7orf72A4D263 438 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 NKX2-6A6NCS4 301 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 SERINC4A6NH21 518 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 CLCA1A8K7I4 914 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 C19orf84I3L1E1 186 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 LINC01387J3KSC0 135 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 ATP8B1O43520 1251 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 H6PDO95479 791 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 NUDT14O95848 222 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 GUSBP08236 651 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 ZCCHC18P0CG32 403 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 TROVE2P10155 538 aaKnown RBP eCLIP11.65□□□□□ -0.54
COL5A1-206ENST00000465877 PEPDP12955 493 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 TIMP3P35625 211 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 P2RX1P51575 399 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 CCR4P51679 360 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 MVDP53602 400 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 GUCY1A3Q02108 690 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 FOXF1Q12946 379 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 SKP2Q13309 424 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 FGFBP1Q14512 234 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 ZNF141Q15928 474 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 BCL2A1Q16548 175 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 SYPL1Q16563 259 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 CGB2Q6NT52 195 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 ADGRE4PQ86SQ3 457 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 GTPBP8Q8N3Z3 284 aaPredicted RBP11.65□□□□□ -0.54
COL5A1-206ENST00000465877 MEIOBQ8N635 442 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 RNF145Q96MT1 663 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 NPAS1Q99742 590 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 TMEM120AQ9BXJ8 343 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 PAIP1Q9H074 479 aaKnown RBP11.65□□□□□ -0.54
COL5A1-206ENST00000465877 SLC38A1Q9H2H9 487 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 CCDC134Q9H6E4 229 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 RUBCNLQ9H714 662 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 TPT1P8Q9HAU6 139 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 CHST11Q9NPF2 352 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 P2RX2Q9UBL9 471 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 ICAM5Q9UMF0 924 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 TRIM33Q9UPN9 1127 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 ZNF337Q9Y3M9 751 aa11.65□□□□□ -0.54
COL5A1-206ENST00000465877 A0A096LPI6 279 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 HSPB2A8KAH6 182 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 ZNF264O43296 627 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 IL2RAP01589 272 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 CHRM4P08173 479 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 LINGO3P0C6S8 592 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 ETFAP13804 333 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 NCF2P19878 526 aaPredicted RBP11.64□□□□□ -0.55
COL5A1-206ENST00000465877 ELK4P28324 431 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 CEACAM8P31997 349 aaPredicted RBP11.64□□□□□ -0.55
COL5A1-206ENST00000465877 MAGEA8P43361 318 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 ZNF136P52737 540 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 CLDN20P56880 219 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 DSTNP60981 165 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 CHRNEQ04844 493 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 TFF3Q07654 80 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 HSPB2Q16082 182 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 MAPK14Q16539 360 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 AGKQ53H12 422 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 LRIF1Q5T3J3 769 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 PLXDC2Q6UX71 529 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 HMGN2P46Q86SG4 172 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 GGNQ86UU5 652 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 GRAMD2AQ8IUY3 354 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 ANKFN1Q8N957 763 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 C9orf106Q8NAJ2 232 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 RELL2Q8NC24 303 aaPredicted RBP11.64□□□□□ -0.55
COL5A1-206ENST00000465877 FAM71CQ8NEG0 241 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 LILRB4Q8NHJ6 448 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 TRNT1Q96Q11 434 aaKnown RBP11.64□□□□□ -0.55
COL5A1-206ENST00000465877 UCK2Q9BZX2 261 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 SAP130Q9H0E3 1048 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms