RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 TPRA1Q86W33 373 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 CACUL1Q86Y37 369 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 GHDCQ8N2G8 530 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 KCT2Q8NC54 265 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 OR5W2Q8NH69 310 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 NT5CQ8TCD5 201 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 ZFPM2Q8WW38 1151 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 RFT1Q96AA3 541 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 SDF2Q99470 211 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 THAP7Q9BT49 309 aaPredicted RBP8.09□□□□□ -1.12
CLK1-201ENST00000321356 DPH1Q9BZG8 443 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 PRDM9Q9NQV7 894 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 CXXC1Q9P0U4 656 aaPredicted RBP8.09□□□□□ -1.12
CLK1-201ENST00000321356 ZMIZ1Q9ULJ6 1067 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 RASD1Q9Y272 281 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 C5orf42Q9H799 3197 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 C2orf16Q68DN1 1984 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 SCN3AQ9NY46 2000 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 DAPL1A0PJW8 107 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 SLC22A31A6NKX4 558 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 E9PI62 339 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 RCBTB2O95199 551 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 ADH1BP00325 375 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 MT-ND5P03915 603 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 ZNF888P0CJ79 500 aaPredicted RBP8.08□□□□□ -1.12
CLK1-201ENST00000321356 SMIM10L1P0DMW3 83 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 IL9P15248 144 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 FUT1P19526 365 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 SLC2A5P22732 501 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 AHCYP23526 432 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 TALDO1P37837 337 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 PITPNBP48739 271 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 CLDN2P57739 230 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 RPS15AP62244 130 aaKnown RBP8.08□□□□□ -1.12
CLK1-201ENST00000321356 E2F1Q01094 437 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 MAPK14Q16539 360 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 FHL5Q5TD97 284 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 GARNL3Q5VVW2 1013 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 LYPD8Q6UX82 237 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 THSD4Q6ZMP0 1018 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 TMPRSS11FQ6ZWK6 438 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 MTSS1LQ765P7 747 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 GET4Q7L5D6 327 aaPredicted RBP8.08□□□□□ -1.12
CLK1-201ENST00000321356 GPALPP1Q8IXQ4 340 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 ZNF619Q8N2I2 560 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 C9orf62Q8N4C0 152 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 SAMD12Q8N8I0 201 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 TEX19Q8NA77 164 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 SLC37A3Q8NCC5 494 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 OR52L1Q8NGH7 329 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 TMEM239Q8WW34 195 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 SNAPC3Q92966 411 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 PTP4A1Q93096 173 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 SCMH1Q96GD3 660 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 SCARF2Q96GP6 870 aaPredicted RBP8.08□□□□□ -1.12
CLK1-201ENST00000321356 SMIM10Q96HG1 83 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 HYLS1Q96M11 299 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 NECTIN4Q96NY8 510 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 GFM1Q96RP9 751 aaKnown RBP8.08□□□□□ -1.12
CLK1-201ENST00000321356 CD180Q99467 661 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 TEAD3Q99594 435 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 HDHD2Q9H0R4 259 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 GHITMQ9H3K2 345 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 PIGUQ9H490 435 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 CACYBPQ9HB71 228 aaKnown RBP8.08□□□□□ -1.12
CLK1-201ENST00000321356 C20orf141Q9NUB4 165 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 MRPL39Q9NYK5 338 aaKnown RBP8.08□□□□□ -1.12
CLK1-201ENST00000321356 OR6C2Q9NZP2 312 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 KCNE5Q9UJ90 142 aa8.08□□□□□ -1.12
CLK1-201ENST00000321356 TRANK1O15050 2925 aa8.07□□□□□ -1.12
CLK1-201ENST00000321356 A0A0A6YYJ9 748 aa8.07□□□□□ -1.12
CLK1-201ENST00000321356 CDHR4A6H8M9 788 aa8.07□□□□□ -1.12
CLK1-201ENST00000321356 FAM86C2PA6NEL3 165 aa8.07□□□□□ -1.12
CLK1-201ENST00000321356 SMLR1H3BR10 107 aa8.07□□□□□ -1.12
CLK1-201ENST00000321356 CHP2O43745 196 aa8.07□□□□□ -1.12
CLK1-201ENST00000321356 SOX30O94993 753 aa8.07□□□□□ -1.12
CLK1-201ENST00000321356 KAT7O95251 611 aa8.07□□□□□ -1.12
CLK1-201ENST00000321356 DBIP07108 87 aaKnown RBP8.07□□□□□ -1.12
CLK1-201ENST00000321356 SBK2P0C263 348 aa8.07□□□□□ -1.12
CLK1-201ENST00000321356 IFI30P13284 250 aa8.07□□□□□ -1.12
CLK1-201ENST00000321356 NID1P14543 1247 aa8.07□□□□□ -1.12
CLK1-201ENST00000321356 BMP7P18075 431 aa8.07□□□□□ -1.12
CLK1-201ENST00000321356 PTNP21246 168 aa8.07□□□□□ -1.12
CLK1-201ENST00000321356 C5AR1P21730 350 aa8.07□□□□□ -1.12
CLK1-201ENST00000321356 ACSL1P33121 698 aa8.07□□□□□ -1.12
CLK1-201ENST00000321356 IGFALSP35858 605 aa8.07□□□□□ -1.12
CLK1-201ENST00000321356 OR10A3P58181 314 aa8.07□□□□□ -1.12
CLK1-201ENST00000321356 TAS2R43P59537 309 aa8.07□□□□□ -1.12
CLK1-201ENST00000321356 FOXK2Q01167 660 aa8.07□□□□□ -1.12
CLK1-201ENST00000321356 RGS1Q08116 209 aa8.07□□□□□ -1.12
CLK1-201ENST00000321356 OR1Q1Q15612 314 aa8.07□□□□□ -1.12
CLK1-201ENST00000321356 SLC36A2Q495M3 483 aa8.07□□□□□ -1.12
CLK1-201ENST00000321356 FAM27D1Q5T7N8 215 aa8.07□□□□□ -1.12
CLK1-201ENST00000321356 DMKNQ6E0U4 476 aaPredicted RBP8.07□□□□□ -1.12
CLK1-201ENST00000321356 PYHIN1Q6K0P9 492 aa8.07□□□□□ -1.12
CLK1-201ENST00000321356 ARL9Q6T311 187 aa8.07□□□□□ -1.12
CLK1-201ENST00000321356 IL20RBQ6UXL0 311 aa8.07□□□□□ -1.12
CLK1-201ENST00000321356 USP53Q70EK8 1073 aa8.07□□□□□ -1.12
CLK1-201ENST00000321356 DGLUCYQ7Z3D6 616 aa8.07□□□□□ -1.12
CLK1-201ENST00000321356 SPRED2Q7Z698 418 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms