RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 GHITMQ9H3K2 345 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 CCDC86Q9H6F5 360 aaKnown RBP14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 ZDHHC4Q9NPG8 344 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 POMT2Q9UKY4 750 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 SIRT4Q9Y6E7 314 aaPredicted RBP14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 NPIPA5A0A0B4J1W7 369 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 RPS10-NUDT3A0A1W2PQS6 291 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 NPIPA7E9PJI5 369 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 IGF2P01344 180 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 ELFN1P0C7U0 828 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 NPIPA8P0DM63 369 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 SLC6A12P48065 614 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 GK2Q14410 553 aaPredicted RBP14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 GSG1Q2KHT4 349 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 MPEG1Q2M385 716 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 PLA1AQ53H76 456 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 LIN54Q6MZP7 749 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 OR2T33Q8NG76 320 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 BRI3BPQ8WY22 251 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 CNOT9Q92600 299 aaKnown RBP14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 CRB3Q9BUF7 120 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 DMRT3Q9NQL9 472 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 USP36Q9P275 1121 aaKnown RBP14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 ENTPD4Q9Y227 616 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 RTTNQ86VV8 2226 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 LRRC37AA6NMS7 1700 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 KRBOX1C9JBD0 128 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 SGK494L7N484 410 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 F11P03951 625 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 C1GALT1C1LP0DN25 315 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 PSMB1P20618 241 aaKnown RBP14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 TBXA2RP21731 343 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 OLFML2AQ68BL7 652 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 ZNF322Q6U7Q0 402 aaPredicted RBP14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 GSG1LQ6UXU4 331 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 PAQR7Q86WK9 346 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 CDK20Q8IZL9 346 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 CHTF18Q8WVB6 975 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 HERVK_113Q902F9 699 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 ZNF707Q96C28 371 aaPredicted RBP14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 OR14A2Q96R54 314 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 COMMD9Q9P000 198 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 LTBP1Q14766 1721 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 FAM86C2PA6NEL3 165 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 TXNL1O43396 289 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 HMGN2P05204 90 aaKnown RBP14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 GSTM3P21266 225 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 ATP5A1P25705 553 aaKnown RBP14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 S100A11P31949 105 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 OCLNQ16625 522 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 KCT2Q8NC54 265 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 HAVCR2Q8TDQ0 301 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 ADAMTS15Q8TE58 950 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 CHFRQ96EP1 664 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 UROC1Q96N76 676 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 SPATA5L1Q9BVQ7 753 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 EXO5Q9H790 373 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 FARSAQ9Y285 508 aaKnown RBP14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 RAB19A4D1S5 217 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 ANTXRLA6NF34 631 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 SEMA7AO75326 666 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 ASGR1P07306 291 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 RAB3AP20336 220 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 CCR8P51685 355 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 LMAN2Q12907 356 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 C12orf73Q69YU5 71 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 CD300LGQ6UXG3 332 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 TMEM173Q86WV6 379 aaPredicted RBP14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 SLC44A3Q8N4M1 653 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 C17orf47Q8NEP4 570 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 SCN2AQ99250 2005 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 TMEM168Q9H0V1 697 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 ZSCAN32Q9NX65 697 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 NTMQ9P121 344 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 POLR2AP24928 1970 aaKnown RBP14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 TMEM129A0AVI4 362 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 F12P00748 615 aaPredicted RBP14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 ZP3P21754 424 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 DCTDP32321 178 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 OMPP47874 163 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 MAP2K5Q13163 448 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 ZNF234Q14588 700 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 HSD11B1LQ7Z5J1 315 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 OAFQ86UD1 273 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 NR2C2APQ86WQ0 139 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 ABHD4Q8TB40 342 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 TMEM255BQ8WV15 326 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 DVL3Q92997 716 aaPredicted RBP14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 SLC38A3Q99624 504 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 XKR8Q9H6D3 395 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 CYSLTR2Q9NS75 346 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 LYARQ9NX58 379 aaKnown RBP14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 ZNF175Q9Y473 711 aa14.89□□□□□ -0.03
PRPF40B-201ENST00000261897 TRBV2A0A0J9YWF9 115 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 CD160O95971 181 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 CXCL2P19875 107 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 OPRD1P41143 372 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 SPINT3P49223 89 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 PRSS53Q2L4Q9 553 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 ARSIQ5FYB1 569 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms