RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 SH3D21A4FU49 640 aa14.3□□□□□ -0.12
CRLF3-203ENST00000578692 SHISA8B8ZZ34 492 aa14.3□□□□□ -0.12
CRLF3-203ENST00000578692 CASKO14936 926 aa14.3□□□□□ -0.12
CRLF3-203ENST00000578692 BPGMP07738 259 aa14.3□□□□□ -0.12
CRLF3-203ENST00000578692 LAMP1P11279 417 aa14.3□□□□□ -0.12
CRLF3-203ENST00000578692 HPGDP15428 266 aa14.3□□□□□ -0.12
CRLF3-203ENST00000578692 LCN1P31025 176 aa14.3□□□□□ -0.12
CRLF3-203ENST00000578692 ARRB2P32121 409 aa14.3□□□□□ -0.12
CRLF3-203ENST00000578692 KIR2DL2P43627 348 aaPredicted RBP14.3□□□□□ -0.12
CRLF3-203ENST00000578692 OCRLQ01968 901 aa14.3□□□□□ -0.12
CRLF3-203ENST00000578692 FAM27E3Q08E93 113 aa14.3□□□□□ -0.12
CRLF3-203ENST00000578692 PON3Q15166 354 aa14.3□□□□□ -0.12
CRLF3-203ENST00000578692 SGCBQ16585 318 aa14.3□□□□□ -0.12
CRLF3-203ENST00000578692 TMEM44Q2T9K0 475 aa14.3□□□□□ -0.12
CRLF3-203ENST00000578692 C6orf136Q5SQH8 315 aa14.3□□□□□ -0.12
CRLF3-203ENST00000578692 IL23RQ5VWK5 629 aa14.3□□□□□ -0.12
CRLF3-203ENST00000578692 BTLAQ7Z6A9 289 aa14.3□□□□□ -0.12
CRLF3-203ENST00000578692 ZAR1Q86SH2 424 aa14.3□□□□□ -0.12
CRLF3-203ENST00000578692 NATD1Q8N6N6 113 aa14.3□□□□□ -0.12
CRLF3-203ENST00000578692 COX18Q8N8Q8 333 aa14.3□□□□□ -0.12
CRLF3-203ENST00000578692 GATSQ8NAP1 163 aa14.3□□□□□ -0.12
CRLF3-203ENST00000578692 CHDHQ8NE62 594 aaPredicted RBP14.3□□□□□ -0.12
CRLF3-203ENST00000578692 FNDC9Q8TBE3 224 aa14.3□□□□□ -0.12
CRLF3-203ENST00000578692 ZNF845Q96IR2 970 aaPredicted RBP14.3□□□□□ -0.12
CRLF3-203ENST00000578692 RNF122Q9H9V4 155 aa14.3□□□□□ -0.12
CRLF3-203ENST00000578692 UBQLN4Q9NRR5 601 aa14.3□□□□□ -0.12
CRLF3-203ENST00000578692 SIRT3Q9NTG7 399 aaPredicted RBP14.3□□□□□ -0.12
CRLF3-203ENST00000578692 ZNF175Q9Y473 711 aa14.3□□□□□ -0.12
CRLF3-203ENST00000578692 HIVEP1P15822 2718 aa14.3□□□□□ -0.12
CRLF3-203ENST00000578692 A0A087WZY1 265 aa14.29□□□□□ -0.12
CRLF3-203ENST00000578692 TYROBPO43914 113 aa14.29□□□□□ -0.12
CRLF3-203ENST00000578692 SKAP2O75563 359 aaPredicted RBP14.29□□□□□ -0.12
CRLF3-203ENST00000578692 LYPLA1O75608 230 aaPredicted RBP14.29□□□□□ -0.12
CRLF3-203ENST00000578692 HSPA4LO95757 839 aa14.29□□□□□ -0.12
CRLF3-203ENST00000578692 HMGN2P05204 90 aaKnown RBP14.29□□□□□ -0.12
CRLF3-203ENST00000578692 CPOXP36551 454 aa14.29□□□□□ -0.12
CRLF3-203ENST00000578692 POU6F2P78424 691 aaPredicted RBP14.29□□□□□ -0.12
CRLF3-203ENST00000578692 PTGR1Q14914 329 aa14.29□□□□□ -0.12
CRLF3-203ENST00000578692 EXOSC6Q5RKV6 272 aaKnown RBP14.29□□□□□ -0.12
CRLF3-203ENST00000578692 CPTPQ5TA50 214 aa14.29□□□□□ -0.12
CRLF3-203ENST00000578692 WDR93Q6P2C0 686 aa14.29□□□□□ -0.12
CRLF3-203ENST00000578692 CAMKMTQ7Z624 323 aa14.29□□□□□ -0.12
CRLF3-203ENST00000578692 METTL25Q8N6Q8 603 aa14.29□□□□□ -0.12
CRLF3-203ENST00000578692 FNDC5Q8NAU1 212 aa14.29□□□□□ -0.12
CRLF3-203ENST00000578692 OR5P2Q8WZ92 322 aa14.29□□□□□ -0.12
CRLF3-203ENST00000578692 JADE3Q92613 823 aa14.29□□□□□ -0.12
CRLF3-203ENST00000578692 CAVIN3Q969G5 261 aa14.29□□□□□ -0.12
CRLF3-203ENST00000578692 OTUB1Q96FW1 271 aaPredicted RBP14.29□□□□□ -0.12
CRLF3-203ENST00000578692 CHMP6Q96FZ7 201 aa14.29□□□□□ -0.12
CRLF3-203ENST00000578692 STACQ99469 402 aa14.29□□□□□ -0.12
CRLF3-203ENST00000578692 PRPF18Q99633 342 aaKnown RBP14.29□□□□□ -0.12
CRLF3-203ENST00000578692 C1orf50Q9BV19 199 aa14.29□□□□□ -0.12
CRLF3-203ENST00000578692 TMEM109Q9BVC6 243 aa14.29□□□□□ -0.12
CRLF3-203ENST00000578692 BTBD2Q9BX70 525 aa14.29□□□□□ -0.12
CRLF3-203ENST00000578692 PIGUQ9H490 435 aa14.29□□□□□ -0.12
CRLF3-203ENST00000578692 PLEKHF2Q9H8W4 249 aa14.29□□□□□ -0.12
CRLF3-203ENST00000578692 DUSP22Q9NRW4 184 aa14.29□□□□□ -0.12
CRLF3-203ENST00000578692 ATAD3AQ9NVI7 634 aa14.29□□□□□ -0.12
CRLF3-203ENST00000578692 GIN1Q9NXP7 522 aa14.29□□□□□ -0.12
CRLF3-203ENST00000578692 SNX8Q9Y5X2 465 aa14.29□□□□□ -0.12
CRLF3-203ENST00000578692 SCDO00767 359 aa14.28□□□□□ -0.12
CRLF3-203ENST00000578692 RAF1P04049 648 aa14.28□□□□□ -0.12
CRLF3-203ENST00000578692 HRGP04196 525 aa14.28□□□□□ -0.12
CRLF3-203ENST00000578692 CD99P14209 185 aa14.28□□□□□ -0.12
CRLF3-203ENST00000578692 CD79BP40259 229 aa14.28□□□□□ -0.12
CRLF3-203ENST00000578692 ETV4P43268 484 aa14.28□□□□□ -0.12
CRLF3-203ENST00000578692 CCT3P49368 545 aaKnown RBP14.28□□□□□ -0.12
CRLF3-203ENST00000578692 PCYT1AP49585 367 aa14.28□□□□□ -0.12
CRLF3-203ENST00000578692 SIRPAP78324 504 aa14.28□□□□□ -0.12
CRLF3-203ENST00000578692 LASP1Q14847 261 aaKnown RBP14.28□□□□□ -0.12
CRLF3-203ENST00000578692 POU4F3Q15319 338 aa14.28□□□□□ -0.12
CRLF3-203ENST00000578692 LSM12Q3MHD2 195 aaKnown RBP14.28□□□□□ -0.12
CRLF3-203ENST00000578692 CCNJQ5T5M9 372 aa14.28□□□□□ -0.12
CRLF3-203ENST00000578692 ZNF474Q6S9Z5 364 aaPredicted RBP14.28□□□□□ -0.12
CRLF3-203ENST00000578692 PAMR1Q6UXH9 720 aa14.28□□□□□ -0.12
CRLF3-203ENST00000578692 GGNQ86UU5 652 aa14.28□□□□□ -0.12
CRLF3-203ENST00000578692 TGIF2LYQ8IUE0 185 aa14.28□□□□□ -0.12
CRLF3-203ENST00000578692 NUDCD3Q8IVD9 361 aa14.28□□□□□ -0.12
CRLF3-203ENST00000578692 MISPQ8IVT2 679 aa14.28□□□□□ -0.12
CRLF3-203ENST00000578692 ACTRT2Q8TDY3 377 aa14.28□□□□□ -0.12
CRLF3-203ENST00000578692 NUDT8Q8WV74 236 aa14.28□□□□□ -0.12
CRLF3-203ENST00000578692 TUBGCP3Q96CW5 907 aa14.28□□□□□ -0.12
CRLF3-203ENST00000578692 COQ8BQ96D53 544 aa14.28□□□□□ -0.12
CRLF3-203ENST00000578692 TMUB1Q9BVT8 246 aa14.28□□□□□ -0.12
CRLF3-203ENST00000578692 PRRG4Q9BZD6 226 aa14.28□□□□□ -0.12
CRLF3-203ENST00000578692 OPN3Q9H1Y3 402 aaPredicted RBP14.28□□□□□ -0.12
CRLF3-203ENST00000578692 PRRC2AP48634 2157 aaKnown RBP14.27□□□□□ -0.12
CRLF3-203ENST00000578692 A0A1W2PQD3 144 aa14.27□□□□□ -0.12
CRLF3-203ENST00000578692 EIF1AYO14602 144 aaKnown RBP14.27□□□□□ -0.12
CRLF3-203ENST00000578692 CTIFO43310 598 aaKnown RBP14.27□□□□□ -0.12
CRLF3-203ENST00000578692 CGAP01215 116 aa14.27□□□□□ -0.12
CRLF3-203ENST00000578692 ZNF17P17021 662 aa14.27□□□□□ -0.12
CRLF3-203ENST00000578692 EIF1AXP47813 144 aaKnown RBP14.27□□□□□ -0.12
CRLF3-203ENST00000578692 KEAP1Q14145 624 aa14.27□□□□□ -0.12
CRLF3-203ENST00000578692 FGFBP1Q14512 234 aa14.27□□□□□ -0.12
CRLF3-203ENST00000578692 CDC73Q6P1J9 531 aa14.27□□□□□ -0.12
CRLF3-203ENST00000578692 WDR75Q8IWA0 830 aaKnown RBP14.27□□□□□ -0.12
CRLF3-203ENST00000578692 GTPBP8Q8N3Z3 284 aaPredicted RBP14.27□□□□□ -0.12
CRLF3-203ENST00000578692 ZNF610Q8N9Z0 462 aa14.27□□□□□ -0.12
CRLF3-203ENST00000578692 PSMA8Q8TAA3 256 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms