RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 NKIRAS1Q9NYS0 192 aa11.67□□□□□ -0.54
HDAC1-209ENST00000484305 ZNF629Q9UEG4 869 aaPredicted RBP11.67□□□□□ -0.54
HDAC1-209ENST00000484305 MARCOQ9UEW3 520 aaPredicted RBP11.67□□□□□ -0.54
HDAC1-209ENST00000484305 FAF1Q9UNN5 650 aaPredicted RBP11.67□□□□□ -0.54
HDAC1-209ENST00000484305 ZNF337Q9Y3M9 751 aa11.67□□□□□ -0.54
HDAC1-209ENST00000484305 PDZD2O15018 2839 aa11.66□□□□□ -0.54
HDAC1-209ENST00000484305 GOLGA8QA0A0J9YX86 632 aa11.66□□□□□ -0.54
HDAC1-209ENST00000484305 GOLGA8OA6NCC3 632 aa11.66□□□□□ -0.54
HDAC1-209ENST00000484305 GOLGA8NF8WBI6 632 aa11.66□□□□□ -0.54
HDAC1-209ENST00000484305 RNASET2O00584 256 aaKnown RBP11.66□□□□□ -0.54
HDAC1-209ENST00000484305 DVL2O14641 736 aa11.66□□□□□ -0.54
HDAC1-209ENST00000484305 SCN2BO60939 215 aa11.66□□□□□ -0.54
HDAC1-209ENST00000484305 ALDOCP09972 364 aaKnown RBP11.66□□□□□ -0.54
HDAC1-209ENST00000484305 KITP10721 976 aa11.66□□□□□ -0.54
HDAC1-209ENST00000484305 EPHA3P29320 983 aa11.66□□□□□ -0.54
HDAC1-209ENST00000484305 SSTR2P30874 369 aa11.66□□□□□ -0.54
HDAC1-209ENST00000484305 LCN1P31025 176 aa11.66□□□□□ -0.54
HDAC1-209ENST00000484305 SOAT1P35610 550 aa11.66□□□□□ -0.54
HDAC1-209ENST00000484305 CLDN15P56746 228 aa11.66□□□□□ -0.54
HDAC1-209ENST00000484305 RPS26P62854 115 aaKnown RBP11.66□□□□□ -0.54
HDAC1-209ENST00000484305 FOXF2Q12947 444 aa11.66□□□□□ -0.54
HDAC1-209ENST00000484305 ATG16L1Q676U5 607 aa11.66□□□□□ -0.54
HDAC1-209ENST00000484305 OGFOD2Q6N063 350 aa11.66□□□□□ -0.54
HDAC1-209ENST00000484305 ARSKQ6UWY0 536 aa11.66□□□□□ -0.54
HDAC1-209ENST00000484305 WDR75Q8IWA0 830 aaKnown RBP11.66□□□□□ -0.54
HDAC1-209ENST00000484305 UBQLNLQ8IYU4 475 aa11.66□□□□□ -0.54
HDAC1-209ENST00000484305 OR5D16Q8NGK9 328 aa11.66□□□□□ -0.54
HDAC1-209ENST00000484305 OR4A15Q8NGL6 344 aa11.66□□□□□ -0.54
HDAC1-209ENST00000484305 ADAMTS15Q8TE58 950 aa11.66□□□□□ -0.54
HDAC1-209ENST00000484305 ARL8AQ96BM9 186 aa11.66□□□□□ -0.54
HDAC1-209ENST00000484305 TESCQ96BS2 214 aa11.66□□□□□ -0.54
HDAC1-209ENST00000484305 MOAP1Q96BY2 351 aa11.66□□□□□ -0.54
HDAC1-209ENST00000484305 C14orf79Q96F83 325 aa11.66□□□□□ -0.54
HDAC1-209ENST00000484305 TEX37Q96LM6 180 aa11.66□□□□□ -0.54
HDAC1-209ENST00000484305 UCN2Q96RP3 112 aa11.66□□□□□ -0.54
HDAC1-209ENST00000484305 SERHL2Q9H4I8 314 aa11.66□□□□□ -0.54
HDAC1-209ENST00000484305 WDR55Q9H6Y2 383 aaPredicted RBP11.66□□□□□ -0.54
HDAC1-209ENST00000484305 UBQLN4Q9NRR5 601 aa11.66□□□□□ -0.54
HDAC1-209ENST00000484305 CLCF1Q9UBD9 225 aa11.66□□□□□ -0.54
HDAC1-209ENST00000484305 NPIPA5A0A0B4J1W7 369 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 PRSS51A0A1B0GVH4 220 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 OR2M5A3KFT3 312 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 SHISA8B8ZZ34 492 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 NPIPA7E9PJI5 369 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 H0YC42 278 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 SYT5O00445 386 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 SCDO00767 359 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 HDAC3O15379 428 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 NPIPA8P0DM63 369 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 PEPDP12955 493 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 HPGDP15428 266 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 CTSSP25774 331 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 DGKQP52824 942 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 SUCLG1P53597 346 aaKnown RBP11.65□□□□□ -0.54
HDAC1-209ENST00000484305 TPD52P55327 224 aaPredicted RBP11.65□□□□□ -0.54
HDAC1-209ENST00000484305 NME5P56597 212 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 KRTAP10-9P60411 292 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 UFM1P61960 85 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 OCRLQ01968 901 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 TLE4Q04727 773 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 SNTB1Q13884 538 aaKnown RBP11.65□□□□□ -0.54
HDAC1-209ENST00000484305 CD226Q15762 336 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 BCL2A1Q16548 175 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 TMEM44Q2T9K0 475 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 GLYR1Q49A26 553 aaPredicted RBP11.65□□□□□ -0.54
HDAC1-209ENST00000484305 SPANXN4Q5MJ08 99 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 DCST2Q5T1A1 773 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 AGBL2Q5U5Z8 902 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 C6orf120Q7Z4R8 191 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 ANKRD46Q86W74 232 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 RAB3IL1Q8TBN0 382 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 WNT2BQ93097 391 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 LURAP1Q96LR2 239 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 OR7D2Q96RA2 312 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 NPAS1Q99742 590 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 SH3GL2Q99962 352 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 KLHDC3Q9BQ90 382 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 PIGQQ9BRB3 760 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 AIG1Q9NVV5 245 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 VDAC3Q9Y277 283 aa11.65□□□□□ -0.54
HDAC1-209ENST00000484305 MPDZO75970 2070 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 TACC2O95359 2948 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 CSMD2Q7Z408 3487 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 HEATR5AQ86XA9 2040 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 POLQO75417 2590 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 A0A1W2PQD3 144 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 TRPC5OSA6NMA1 111 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 C9JVG2 144 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 H3BML4 177 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 LINC01387J3KSC0 135 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 HCRTR2O43614 444 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 SOX30O94993 753 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 RCBTB2O95199 551 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 CPSF4O95639 269 aaKnown RBP11.64□□□□□ -0.55
HDAC1-209ENST00000484305 TGM6O95932 706 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 KRT16P08779 473 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 TMIGD3P0DMS9 266 aaPredicted RBP11.64□□□□□ -0.55
HDAC1-209ENST00000484305 POU3F2P20265 443 aaPredicted RBP11.64□□□□□ -0.55
HDAC1-209ENST00000484305 ATP6V1C1P21283 382 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 MATN1P21941 496 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms