RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 ZSCAN5BA6NJL1 495 aa3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 NUDT21O43809 227 aaKnown RBP3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 CHRNA1P02708 482 aa3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 HBQ1P09105 142 aa3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 PPIAL4GP0DN37 164 aa3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 CLUP10909 449 aa3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 KRT13P13646 458 aa3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 IGHV1-2P23083 117 aa3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 MDH2P40926 338 aaKnown RBP3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 DHPSP49366 369 aaPredicted RBP3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 RND3P61587 244 aa3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 RGS1Q08116 209 aa3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 OVGP1Q12889 678 aa3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 ATXN7L3Q14CW9 347 aaPredicted RBP3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 CCDC57Q2TAC2 916 aa3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 GLYR1Q49A26 553 aaPredicted RBP3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 PAN3Q58A45 887 aaKnown RBP3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 DNAJC21Q5F1R6 531 aaKnown RBP3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 SH2D6Q7Z4S9 175 aa3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 C9orf40Q8IXQ3 194 aa3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 CD177Q8N6Q3 437 aa3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 ADAMTS16Q8TE57 1224 aa3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 MYLPFQ96A32 169 aa3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 C18orf25Q96B23 403 aaPredicted RBP3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 TMEM80Q96HE8 168 aa3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 MIEF1Q9NQG6 463 aa3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 PNO1Q9NRX1 252 aaKnown RBP3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 TMOD2Q9NZR1 351 aa3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 VSIG4Q9Y279 399 aa3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 IGLV3-10A0A075B6K4 115 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 A0A1W2PQ72 361 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 GSAPA4D1B5 854 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 TSC22D2O75157 780 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 ASNSP08243 561 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 TSPY4P0CV99 314 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 TSPY10P0CW01 314 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 EPB41P11171 864 aaKnown RBP3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 PDHBP11177 359 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 FASP25445 335 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 MAGEA5P43359 124 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 MEOX2P50222 304 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 ERVPABLB-1P60509 514 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 RPL32P62910 135 aaKnown RBP3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 RPL8P62917 257 aaKnown RBP3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 KLHL30Q0D2K2 578 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 ZNF154Q13106 437 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 MAPK6Q16659 721 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 TATDN3Q17R31 274 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 ZNF658Q5TYW1 1059 aaPredicted RBP3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 METTL11BQ5VVY1 283 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 NCR3LG1Q68D85 454 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 SULT1C3Q6IMI6 304 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 BLOC1S2Q6QNY1 142 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 TMEM17Q86X19 198 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 ZNF525Q8N782 197 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 MRAPQ8TCY5 172 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 DPH7Q9BTV6 452 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 PAXXQ9BUH6 204 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 TSSK1BQ9BXA7 367 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 ZNF275Q9NSD4 429 aaPredicted RBP3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 SAMD4AQ9UPU9 718 aaKnown RBP3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 L3MBTL1Q9Y468 752 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 ATP6V0A2Q9Y487 856 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 ADAMTS9Q9P2N4 1935 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 ZNF318Q5VUA4 2279 aa3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 SF3B1O75533 1304 aaKnown RBP eCLIP3.44□□□□□ -1.86
SMNDC1-205ENST00000477763 FAM168BA1KXE4 195 aa3.43□□□□□ -1.86
SMNDC1-205ENST00000477763 SAGE2PA6NJ88 616 aa3.43□□□□□ -1.86
SMNDC1-205ENST00000477763 OR6C65A6NJZ3 312 aa3.43□□□□□ -1.86
SMNDC1-205ENST00000477763 A8MUI8 341 aa3.43□□□□□ -1.86
SMNDC1-205ENST00000477763 ANGPT2O15123 496 aa3.43□□□□□ -1.86
SMNDC1-205ENST00000477763 OPN1LWP04000 364 aa3.43□□□□□ -1.86
SMNDC1-205ENST00000477763 PCCBP05166 539 aa3.43□□□□□ -1.86
SMNDC1-205ENST00000477763 KRT8P05787 483 aa3.43□□□□□ -1.86
SMNDC1-205ENST00000477763 CD55P08174 381 aa3.43□□□□□ -1.86
SMNDC1-205ENST00000477763 HSPA5P11021 654 aaKnown RBP3.43□□□□□ -1.86
SMNDC1-205ENST00000477763 PTBP1P26599 531 aaKnown RBP eCLIP3.43□□□□□ -1.86
SMNDC1-205ENST00000477763 VLDLRP98155 873 aa3.43□□□□□ -1.86
SMNDC1-205ENST00000477763 PAGE2BQ5JRK9 111 aa3.43□□□□□ -1.86
SMNDC1-205ENST00000477763 CELF3Q5SZQ8 465 aaKnown RBP3.43□□□□□ -1.86
SMNDC1-205ENST00000477763 DPY19L4Q7Z388 723 aa3.43□□□□□ -1.86
SMNDC1-205ENST00000477763 APOBEC3FQ8IUX4 373 aaKnown RBP3.43□□□□□ -1.86
SMNDC1-205ENST00000477763 CNIH3Q8TBE1 160 aa3.43□□□□□ -1.86
SMNDC1-205ENST00000477763 TRUB1Q8WWH5 349 aaKnown RBP3.43□□□□□ -1.86
SMNDC1-205ENST00000477763 RSPH1Q8WYR4 309 aa3.43□□□□□ -1.86
SMNDC1-205ENST00000477763 THRSPQ92748 146 aa3.43□□□□□ -1.86
SMNDC1-205ENST00000477763 DEFB126Q9BYW3 111 aa3.43□□□□□ -1.86
SMNDC1-205ENST00000477763 RHOJQ9H4E5 214 aa3.43□□□□□ -1.86
SMNDC1-205ENST00000477763 SMC3Q9UQE7 1217 aa3.43□□□□□ -1.86
SMNDC1-205ENST00000477763 ANKRD30BQ9BXX2 1392 aa3.42□□□□□ -1.86
SMNDC1-205ENST00000477763 FRG2CA6NGY1 282 aa3.42□□□□□ -1.86
SMNDC1-205ENST00000477763 STX7O15400 261 aaKnown RBP3.42□□□□□ -1.86
SMNDC1-205ENST00000477763 CABYRO75952 493 aa3.42□□□□□ -1.86
SMNDC1-205ENST00000477763 IGKV3-15P01624 115 aa3.42□□□□□ -1.86
SMNDC1-205ENST00000477763 IL2RGP31785 369 aa3.42□□□□□ -1.86
SMNDC1-205ENST00000477763 ACADVLP49748 655 aa3.42□□□□□ -1.86
SMNDC1-205ENST00000477763 P2RY4P51582 365 aa3.42□□□□□ -1.86
SMNDC1-205ENST00000477763 KIAA0040Q15053 153 aa3.42□□□□□ -1.86
SMNDC1-205ENST00000477763 CHI3L2Q15782 390 aa3.42□□□□□ -1.86
SMNDC1-205ENST00000477763 USH1GQ495M9 461 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms