RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 NFATC1O95644 943 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 UGT2B7P16662 529 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 RAB3AP20336 220 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 CNTN1Q12860 1018 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 COL9A2Q14055 689 aaPredicted RBP12.86□□□□□ -0.35
NPHP4-207ENST00000470763 MELKQ14680 651 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 FAM74A3Q4VXF1 159 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 SLC25A25Q6KCM7 469 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 PRSS55Q6UWB4 352 aaPredicted RBP12.86□□□□□ -0.35
NPHP4-207ENST00000470763 RASGRP3Q8IV61 690 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 BVESQ8NE79 360 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 OR11G2Q8NGC1 345 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 OR13C5Q8NGS8 318 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 TMEM159Q96B96 161 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 FAIM2Q9BWQ8 316 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 WDR26Q9H7D7 661 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 MED20Q9H944 212 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 PRELID3BQ9Y3B1 194 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 A0A0G2JK05 382 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 LINC01387J3KSC0 135 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 ARPC5O15511 151 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 CATP04040 527 aaKnown RBP12.86□□□□□ -0.35
NPHP4-207ENST00000470763 GAAP10253 952 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 AKR1A1P14550 325 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 RPL17P18621 184 aaKnown RBP12.86□□□□□ -0.35
NPHP4-207ENST00000470763 HTR4Q13639 388 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 RTP2Q5QGT7 225 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 RETSATQ6NUM9 610 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 C2orf73Q8N5S3 287 aaPredicted RBP12.86□□□□□ -0.35
NPHP4-207ENST00000470763 DCAF4L2Q8NA75 395 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 OR56A3Q8NH54 315 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 TEX10Q9NXF1 929 aaPredicted RBP12.86□□□□□ -0.35
NPHP4-207ENST00000470763 GLS2Q9UI32 602 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 CLEC4EQ9ULY5 219 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 RCE1Q9Y256 329 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 PLSCR5A0PG75 271 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 ARPC1BO15143 372 aaKnown RBP12.85□□□□□ -0.35
NPHP4-207ENST00000470763 ADAMTS4O75173 837 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 ZNF821O75541 412 aaPredicted RBP12.85□□□□□ -0.35
NPHP4-207ENST00000470763 IGHA1P01876 353 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 HOXB3P14651 431 aaPredicted RBP12.85□□□□□ -0.35
NPHP4-207ENST00000470763 GSTM3P21266 225 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 NFYAP23511 347 aaPredicted RBP12.85□□□□□ -0.35
NPHP4-207ENST00000470763 ACVR1BP36896 505 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 GDNFP39905 211 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 GPR4P46093 362 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 STXBP1P61764 594 aaKnown RBP12.85□□□□□ -0.35
NPHP4-207ENST00000470763 OC90Q02509 493 aaPredicted RBP12.85□□□□□ -0.35
NPHP4-207ENST00000470763 NHLRC1Q6VVB1 395 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 RPTNQ6XPR3 784 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 IKBIPQ70UQ0 350 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 CPOQ8IVL8 374 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 KRT78Q8N1N4 520 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 CPXM2Q8N436 756 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 TMEM99Q8N816 258 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 ZNF480Q8WV37 535 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 ATOH1Q92858 354 aaPredicted RBP12.85□□□□□ -0.35
NPHP4-207ENST00000470763 ALG8Q9BVK2 526 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 SLC6A17Q9H1V8 727 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 SLC6A15Q9H2J7 730 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 PIPOXQ9P0Z9 390 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 ZNF69Q9UC07 566 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 ING1Q9UK53 422 aaPredicted RBP12.85□□□□□ -0.35
NPHP4-207ENST00000470763 CPSF4LA6NMK7 179 aaKnown RBP12.85□□□□□ -0.35
NPHP4-207ENST00000470763 LRRN3E7EW58 273 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 PGRMC2O15173 223 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 SURF4O15260 269 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 INPPL1O15357 1258 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 ADAM12O43184 909 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 SOCS5O75159 536 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 SLCO2B1O94956 709 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 IGSF6O95976 241 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 FGF2P09038 288 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 AHRP35869 848 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 RAD52P43351 418 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 SPINT3P49223 89 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 CTSCP53634 463 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 ACSM1Q08AH1 577 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 PIP5KL1Q5T9C9 394 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 RRM2BQ7LG56 351 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 ZNF454Q8N9F8 522 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 CLRN3Q8NCR9 226 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 GANCQ8TET4 914 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 SMAP2Q8WU79 429 aaPredicted RBP12.85□□□□□ -0.35
NPHP4-207ENST00000470763 KCTD12Q96CX2 325 aaKnown RBP12.85□□□□□ -0.35
NPHP4-207ENST00000470763 LRRN3Q9H3W5 708 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 HINT3Q9NQE9 182 aaKnown RBP12.85□□□□□ -0.35
NPHP4-207ENST00000470763 SLC35C2Q9NQQ7 365 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 BABAM2Q9NXR7 383 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 H2AFY2Q9P0M6 372 aaPredicted RBP12.85□□□□□ -0.35
NPHP4-207ENST00000470763 B4GALT6Q9UBX8 382 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 OR6C75A6NL08 312 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 DNASE2O00115 360 aaPredicted RBP12.85□□□□□ -0.35
NPHP4-207ENST00000470763 UBL3O95164 117 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 NPPBP16860 134 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 MMP15P51511 669 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 TAS2R41P59536 307 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 DEFA5Q01523 94 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 KLF9Q13886 244 aaPredicted RBP12.85□□□□□ -0.35
NPHP4-207ENST00000470763 HLXQ14774 488 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms