RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 SLC19A1P41440 591 aa3.57□□□□□ -1.84
PRPF39-206ENST00000554429 SLC15A2Q16348 729 aa3.57□□□□□ -1.84
PRPF39-206ENST00000554429 DDB1Q16531 1140 aa3.57□□□□□ -1.84
PRPF39-206ENST00000554429 SLC27A3Q5K4L6 730 aa3.57□□□□□ -1.84
PRPF39-206ENST00000554429 DIEXFQ68CQ4 756 aaKnown RBP3.57□□□□□ -1.84
PRPF39-206ENST00000554429 COL26A1Q96A83 441 aa3.57□□□□□ -1.84
PRPF39-206ENST00000554429 HIRIP3Q9BW71 556 aaPredicted RBP3.57□□□□□ -1.84
PRPF39-206ENST00000554429 BRCA1P38398 1863 aaKnown RBP3.57□□□□□ -1.84
PRPF39-206ENST00000554429 ZC3H6P61129 1189 aaKnown RBP3.57□□□□□ -1.84
PRPF39-206ENST00000554429 NKX1-1Q15270 411 aaPredicted RBP3.57□□□□□ -1.84
PRPF39-206ENST00000554429 ADCY9O60503 1353 aa3.57□□□□□ -1.84
PRPF39-206ENST00000554429 COL5A3P25940 1745 aaPredicted RBP3.57□□□□□ -1.84
PRPF39-206ENST00000554429 ARFGEF1Q9Y6D6 1849 aa3.57□□□□□ -1.84
PRPF39-206ENST00000554429 TRAK2O60296 914 aa3.57□□□□□ -1.84
PRPF39-206ENST00000554429 PPP4CP60510 307 aa3.57□□□□□ -1.84
PRPF39-206ENST00000554429 SAFB2Q14151 953 aaKnown RBP eCLIP3.57□□□□□ -1.84
PRPF39-206ENST00000554429 SPTY2D1Q68D10 685 aaPredicted RBP3.57□□□□□ -1.84
PRPF39-206ENST00000554429 ZNF662Q6ZS27 426 aa3.57□□□□□ -1.84
PRPF39-206ENST00000554429 SPOCK2Q92563 424 aa3.57□□□□□ -1.84
PRPF39-206ENST00000554429 KIFC2Q96AC6 838 aa3.57□□□□□ -1.84
PRPF39-206ENST00000554429 STRN4Q9NRL3 753 aa3.57□□□□□ -1.84
PRPF39-206ENST00000554429 STK32BQ9NY57 414 aa3.57□□□□□ -1.84
PRPF39-206ENST00000554429 RBM27Q9P2N5 1060 aaKnown RBP3.57□□□□□ -1.84
PRPF39-206ENST00000554429 STK24Q9Y6E0 443 aa3.57□□□□□ -1.84
PRPF39-206ENST00000554429 CGNL1Q0VF96 1302 aa3.56□□□□□ -1.84
PRPF39-206ENST00000554429 RNF225M0QZC1 329 aaPredicted RBP3.56□□□□□ -1.84
PRPF39-206ENST00000554429 FOXK2Q01167 660 aa3.56□□□□□ -1.84
PRPF39-206ENST00000554429 TXNRD1Q16881 649 aa3.56□□□□□ -1.84
PRPF39-206ENST00000554429 PPP1R1BQ9UD71 204 aaPredicted RBP3.56□□□□□ -1.84
PRPF39-206ENST00000554429 PPME1Q9Y570 386 aa3.56□□□□□ -1.84
PRPF39-206ENST00000554429 ANKRD36BQ8N2N9 1353 aa3.56□□□□□ -1.84
PRPF39-206ENST00000554429 C4BP0C0L5 1744 aa3.56□□□□□ -1.84
PRPF39-206ENST00000554429 TPD52L2O43399 206 aaKnown RBP3.56□□□□□ -1.84
PRPF39-206ENST00000554429 NBPF1Q3BBV0 1214 aa3.56□□□□□ -1.84
PRPF39-206ENST00000554429 FAM182BQ5T319 152 aa3.56□□□□□ -1.84
PRPF39-206ENST00000554429 APBB1IPQ7Z5R6 666 aaPredicted RBP3.56□□□□□ -1.84
PRPF39-206ENST00000554429 ANKRD13AQ8IZ07 590 aa3.56□□□□□ -1.84
PRPF39-206ENST00000554429 SPATA32Q96LK8 384 aa3.56□□□□□ -1.84
PRPF39-206ENST00000554429 FAM117AQ9C073 453 aa3.56□□□□□ -1.84
PRPF39-206ENST00000554429 CABP1Q9NZU7 370 aa3.56□□□□□ -1.84
PRPF39-206ENST00000554429 ANKRD62A6NC57 917 aa3.55□□□□□ -1.84
PRPF39-206ENST00000554429 PEX14O75381 377 aa3.55□□□□□ -1.84
PRPF39-206ENST00000554429 NEFMP07197 916 aa3.55□□□□□ -1.84
PRPF39-206ENST00000554429 LORP23490 312 aaPredicted RBP3.55□□□□□ -1.84
PRPF39-206ENST00000554429 CDCA8Q53HL2 280 aa3.55□□□□□ -1.84
PRPF39-206ENST00000554429 SPRYD7Q5W111 196 aa3.55□□□□□ -1.84
PRPF39-206ENST00000554429 ZNF784Q8NCA9 323 aaPredicted RBP3.55□□□□□ -1.84
PRPF39-206ENST00000554429 EVI5LQ96CN4 794 aa3.55□□□□□ -1.84
PRPF39-206ENST00000554429 SYT17Q9BSW7 474 aa3.55□□□□□ -1.84
PRPF39-206ENST00000554429 MYH16Q9H6N6 1097 aa3.55□□□□□ -1.84
PRPF39-206ENST00000554429 KTN1Q86UP2 1357 aaKnown RBP3.55□□□□□ -1.84
PRPF39-206ENST00000554429 C10orf71Q711Q0 1435 aa3.55□□□□□ -1.84
PRPF39-206ENST00000554429 NSD3Q9BZ95 1437 aa3.55□□□□□ -1.84
PRPF39-206ENST00000554429 EXOC5O00471 708 aa3.55□□□□□ -1.84
PRPF39-206ENST00000554429 RIOK3O14730 519 aaKnown RBP3.55□□□□□ -1.84
PRPF39-206ENST00000554429 PLPP6Q8IY26 295 aa3.55□□□□□ -1.84
PRPF39-206ENST00000554429 OXER1Q8TDS5 423 aa3.55□□□□□ -1.84
PRPF39-206ENST00000554429 DLEC1Q9Y238 1755 aa3.55□□□□□ -1.84
PRPF39-206ENST00000554429 CARNS1A5YM72 827 aa3.54□□□□□ -1.84
PRPF39-206ENST00000554429 IL2RBP14784 551 aa3.54□□□□□ -1.84
PRPF39-206ENST00000554429 TOM1L2Q6ZVM7 507 aa3.54□□□□□ -1.84
PRPF39-206ENST00000554429 MICAL1Q8TDZ2 1067 aa3.54□□□□□ -1.84
PRPF39-206ENST00000554429 IP6K1Q92551 441 aa3.54□□□□□ -1.84
PRPF39-206ENST00000554429 MTRQ99707 1265 aa3.54□□□□□ -1.84
PRPF39-206ENST00000554429 KDM4CQ9H3R0 1056 aa3.54□□□□□ -1.84
PRPF39-206ENST00000554429 C1QTNF8P60827 252 aa3.54□□□□□ -1.84
PRPF39-206ENST00000554429 SRPK2P78362 688 aaKnown RBP3.54□□□□□ -1.84
PRPF39-206ENST00000554429 CIZ1Q9ULV3 898 aaPredicted RBP3.54□□□□□ -1.84
PRPF39-206ENST00000554429 SUGT1Q9Y2Z0 365 aa3.54□□□□□ -1.84
PRPF39-206ENST00000554429 ADAMTS7Q9UKP4 1686 aa3.54□□□□□ -1.84
PRPF39-206ENST00000554429 NRXN2Q9P2S2 1712 aa3.54□□□□□ -1.84
PRPF39-206ENST00000554429 TNRC6CQ9HCJ0 1690 aaKnown RBP3.54□□□□□ -1.84
PRPF39-206ENST00000554429 GDF9O60383 454 aa3.54□□□□□ -1.84
PRPF39-206ENST00000554429 PTF1AQ7RTS3 328 aa3.54□□□□□ -1.84
PRPF39-206ENST00000554429 FHDC1Q9C0D6 1143 aaPredicted RBP3.54□□□□□ -1.84
PRPF39-206ENST00000554429 PNPLA7Q6ZV29 1317 aa3.53□□□□□ -1.84
PRPF39-206ENST00000554429 ROCK2O75116 1388 aaKnown RBP3.53□□□□□ -1.84
PRPF39-206ENST00000554429 GTPBP6O43824 516 aaPredicted RBP3.53□□□□□ -1.84
PRPF39-206ENST00000554429 ZNF827Q17R98 1081 aa3.53□□□□□ -1.84
PRPF39-206ENST00000554429 NUTM2GQ5VZR2 741 aa3.53□□□□□ -1.84
PRPF39-206ENST00000554429 FLAD1Q8NFF5 587 aa3.53□□□□□ -1.84
PRPF39-206ENST00000554429 L3MBTL2Q969R5 705 aa3.53□□□□□ -1.84
PRPF39-206ENST00000554429 CD2APQ9Y5K6 639 aa3.53□□□□□ -1.84
PRPF39-206ENST00000554429 MAP3K19Q56UN5 1328 aa3.53□□□□□ -1.84
PRPF39-206ENST00000554429 MEGF6O75095 1541 aa3.53□□□□□ -1.84
PRPF39-206ENST00000554429 A0A1W2PP64 1363 aa3.53□□□□□ -1.84
PRPF39-206ENST00000554429 C4AP0C0L4 1744 aa3.53□□□□□ -1.84
PRPF39-206ENST00000554429 GRIN3BO60391 1043 aa3.53□□□□□ -1.84
PRPF39-206ENST00000554429 FOXD4Q12950 439 aaPredicted RBP3.53□□□□□ -1.84
PRPF39-206ENST00000554429 GORABQ5T7V8 394 aa3.53□□□□□ -1.84
PRPF39-206ENST00000554429 RBM26Q5T8P6 1007 aaKnown RBP3.53□□□□□ -1.84
PRPF39-206ENST00000554429 IRF7Q92985 503 aa3.53□□□□□ -1.84
PRPF39-206ENST00000554429 TERF2IPQ9NYB0 399 aa3.53□□□□□ -1.84
PRPF39-206ENST00000554429 TONSLQ96HA7 1378 aa3.52□□□□□ -1.85
PRPF39-206ENST00000554429 VIRMAQ69YN4 1812 aaKnown RBP3.52□□□□□ -1.85
PRPF39-206ENST00000554429 SMG6Q86US8 1419 aaKnown RBP3.52□□□□□ -1.85
PRPF39-206ENST00000554429 RAB11FIP3O75154 756 aa3.52□□□□□ -1.85
PRPF39-206ENST00000554429 GTF2E1P29083 439 aaPredicted RBP3.52□□□□□ -1.85
PRPF39-206ENST00000554429 VTI1AQ96AJ9 217 aa3.52□□□□□ -1.85
PRPF39-206ENST00000554429 LRRC4BQ9NT99 713 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms