RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 ELOA3BQ3SY89 546 aa7.77□□□□□ -1.17
ITGB1-219ENST00000534049 C1orf229Q6ZS94 237 aaPredicted RBP7.77□□□□□ -1.17
ITGB1-219ENST00000534049 FCHSD1Q86WN1 690 aa7.77□□□□□ -1.17
ITGB1-219ENST00000534049 ZNF280CQ8ND82 737 aa7.77□□□□□ -1.17
ITGB1-219ENST00000534049 ELOA3Q8NG57 546 aa7.77□□□□□ -1.17
ITGB1-219ENST00000534049 NOP53Q9NZM5 478 aaKnown RBP7.77□□□□□ -1.17
ITGB1-219ENST00000534049 HCN2Q9UL51 889 aa7.77□□□□□ -1.17
ITGB1-219ENST00000534049 GNB5O14775 395 aa7.76□□□□□ -1.17
ITGB1-219ENST00000534049 PTCD1O75127 700 aaKnown RBP7.76□□□□□ -1.17
ITGB1-219ENST00000534049 C11orf91Q3C1V1 193 aa7.76□□□□□ -1.17
ITGB1-219ENST00000534049 CHSY3Q70JA7 882 aa7.76□□□□□ -1.17
ITGB1-219ENST00000534049 CLP1Q92989 425 aaKnown RBP7.76□□□□□ -1.17
ITGB1-219ENST00000534049 TNFRSF25Q93038 417 aa7.76□□□□□ -1.17
ITGB1-219ENST00000534049 QTRT2Q9H974 415 aaKnown RBP7.76□□□□□ -1.17
ITGB1-219ENST00000534049 CNTNAP5Q8WYK1 1306 aa7.76□□□□□ -1.17
ITGB1-219ENST00000534049 ARID3CA6NKF2 412 aa7.75□□□□□ -1.17
ITGB1-219ENST00000534049 STK32AQ8WU08 396 aa7.75□□□□□ -1.17
ITGB1-219ENST00000534049 KLF15Q9UIH9 416 aa7.75□□□□□ -1.17
ITGB1-219ENST00000534049 PRMT3O60678 531 aa7.74□□□□□ -1.17
ITGB1-219ENST00000534049 LGR5O75473 907 aa7.74□□□□□ -1.17
ITGB1-219ENST00000534049 IGHA1P01876 353 aa7.74□□□□□ -1.17
ITGB1-219ENST00000534049 DGKGP49619 791 aa7.74□□□□□ -1.17
ITGB1-219ENST00000534049 ARSDP51689 593 aa7.74□□□□□ -1.17
ITGB1-219ENST00000534049 FAM69CQ0P6D2 419 aa7.74□□□□□ -1.17
ITGB1-219ENST00000534049 FKBP5Q13451 457 aaPredicted RBP7.74□□□□□ -1.17
ITGB1-219ENST00000534049 DGKZQ13574 1117 aa7.74□□□□□ -1.17
ITGB1-219ENST00000534049 OCLNQ16625 522 aa7.74□□□□□ -1.17
ITGB1-219ENST00000534049 TMEM164Q5U3C3 297 aa7.74□□□□□ -1.17
ITGB1-219ENST00000534049 CCDC82Q8N4S0 544 aa7.74□□□□□ -1.17
ITGB1-219ENST00000534049 SLC30A3Q99726 388 aa7.74□□□□□ -1.17
ITGB1-219ENST00000534049 SNRPNP63162 240 aaKnown RBP7.73□□□□□ -1.17
ITGB1-219ENST00000534049 PCSK7Q16549 785 aa7.73□□□□□ -1.17
ITGB1-219ENST00000534049 PNMA5Q96PV4 448 aa7.73□□□□□ -1.17
ITGB1-219ENST00000534049 MDFIQ99750 246 aa7.73□□□□□ -1.17
ITGB1-219ENST00000534049 CXXC1Q9P0U4 656 aaPredicted RBP7.73□□□□□ -1.17
ITGB1-219ENST00000534049 DMGDHQ9UI17 866 aaKnown RBP7.73□□□□□ -1.17
ITGB1-219ENST00000534049 SPDYE3A6NKU9 549 aa7.72□□□□□ -1.17
ITGB1-219ENST00000534049 IDH3AP50213 366 aa7.72□□□□□ -1.17
ITGB1-219ENST00000534049 CCINQ13939 588 aa7.72□□□□□ -1.17
ITGB1-219ENST00000534049 C16orf46Q6P387 395 aa7.72□□□□□ -1.17
ITGB1-219ENST00000534049 PRIMPOLQ96LW4 560 aa7.72□□□□□ -1.17
ITGB1-219ENST00000534049 KLK14Q9P0G3 267 aa7.72□□□□□ -1.17
ITGB1-219ENST00000534049 BCS1LQ9Y276 419 aa7.72□□□□□ -1.17
ITGB1-219ENST00000534049 MICAL2O94851 1124 aa7.71□□□□□ -1.18
ITGB1-219ENST00000534049 ARID4AP29374 1257 aaPredicted RBP7.71□□□□□ -1.18
ITGB1-219ENST00000534049 INPP5BP32019 993 aa7.71□□□□□ -1.18
ITGB1-219ENST00000534049 ADH7P40394 386 aa7.71□□□□□ -1.18
ITGB1-219ENST00000534049 LINC00114Q6XXX2 140 aa7.71□□□□□ -1.18
ITGB1-219ENST00000534049 BHMTQ93088 406 aa7.71□□□□□ -1.18
ITGB1-219ENST00000534049 IFT43Q96FT9 208 aa7.71□□□□□ -1.18
ITGB1-219ENST00000534049 DCAF5Q96JK2 942 aa7.71□□□□□ -1.18
ITGB1-219ENST00000534049 PRDM6Q9NQX0 595 aa7.71□□□□□ -1.18
ITGB1-219ENST00000534049 FAM13BQ9NYF5 915 aa7.71□□□□□ -1.18
ITGB1-219ENST00000534049 HOXB4P17483 251 aaPredicted RBP7.7□□□□□ -1.18
ITGB1-219ENST00000534049 BRD2P25440 801 aaKnown RBP7.7□□□□□ -1.18
ITGB1-219ENST00000534049 GSX2Q9BZM3 304 aa7.7□□□□□ -1.18
ITGB1-219ENST00000534049 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.7□□□□□ -1.18
ITGB1-219ENST00000534049 MAP3K6O95382 1288 aa7.69□□□□□ -1.18
ITGB1-219ENST00000534049 GRIN2CQ14957 1233 aa7.69□□□□□ -1.18
ITGB1-219ENST00000534049 COX20Q5RI15 118 aa7.69□□□□□ -1.18
ITGB1-219ENST00000534049 KCTD17Q8N5Z5 321 aa7.69□□□□□ -1.18
ITGB1-219ENST00000534049 ATP2B4P23634 1241 aa7.68□□□□□ -1.18
ITGB1-219ENST00000534049 UBE2OQ9C0C9 1292 aaKnown RBP7.68□□□□□ -1.18
ITGB1-219ENST00000534049 LRFN2Q9ULH4 789 aa7.68□□□□□ -1.18
ITGB1-219ENST00000534049 EGFRP00533 1210 aa7.67□□□□□ -1.18
ITGB1-219ENST00000534049 RAB44Q7Z6P3 723 aaPredicted RBP7.67□□□□□ -1.18
ITGB1-219ENST00000534049 TREML1Q86YW5 311 aa7.67□□□□□ -1.18
ITGB1-219ENST00000534049 ABTB2Q8N961 1025 aa7.67□□□□□ -1.18
ITGB1-219ENST00000534049 NFKB1P19838 968 aa7.66□□□□□ -1.18
ITGB1-219ENST00000534049 RTCBQ9Y3I0 505 aaKnown RBP7.66□□□□□ -1.18
ITGB1-219ENST00000534049 M0R082 166 aa7.65□□□□□ -1.18
ITGB1-219ENST00000534049 ZNF417Q8TAU3 575 aa7.65□□□□□ -1.18
ITGB1-219ENST00000534049 ZNF587Q96SQ5 575 aaPredicted RBP7.65□□□□□ -1.18
ITGB1-219ENST00000534049 SLC6A14Q9UN76 642 aa7.65□□□□□ -1.18
ITGB1-219ENST00000534049 MTMR7Q9Y216 660 aa7.65□□□□□ -1.18
ITGB1-219ENST00000534049 LILRB5O75023 590 aa7.64□□□□□ -1.19
ITGB1-219ENST00000534049 SPATA31C1P0DKV0 1188 aa7.64□□□□□ -1.19
ITGB1-219ENST00000534049 TBC1D8BQ0IIM8 1120 aa7.64□□□□□ -1.19
ITGB1-219ENST00000534049 PLA2G4EQ3MJ16 856 aa7.64□□□□□ -1.19
ITGB1-219ENST00000534049 PRRT3Q5FWE3 981 aa7.64□□□□□ -1.19
ITGB1-219ENST00000534049 GPAT2Q6NUI2 795 aa7.64□□□□□ -1.19
ITGB1-219ENST00000534049 MICALL1Q8N3F8 863 aa7.64□□□□□ -1.19
ITGB1-219ENST00000534049 PIK3R5Q8WYR1 880 aa7.64□□□□□ -1.19
ITGB1-219ENST00000534049 MKNK1Q9BUB5 465 aa7.64□□□□□ -1.19
ITGB1-219ENST00000534049 C1orf115Q9H7X2 142 aa7.64□□□□□ -1.19
ITGB1-219ENST00000534049 DNAJB12Q9NXW2 375 aaKnown RBP7.64□□□□□ -1.19
ITGB1-219ENST00000534049 STIM2Q9P246 746 aa7.64□□□□□ -1.19
ITGB1-219ENST00000534049 MSTNO14793 375 aa7.63□□□□□ -1.19
ITGB1-219ENST00000534049 OPLAHO14841 1288 aa7.63□□□□□ -1.19
ITGB1-219ENST00000534049 XYLBO75191 536 aa7.63□□□□□ -1.19
ITGB1-219ENST00000534049 RARAP10276 462 aa7.63□□□□□ -1.19
ITGB1-219ENST00000534049 COL8A1P27658 744 aa7.63□□□□□ -1.19
ITGB1-219ENST00000534049 B4GALNT3Q6L9W6 998 aa7.63□□□□□ -1.19
ITGB1-219ENST00000534049 PLVAPQ9BX97 442 aa7.63□□□□□ -1.19
ITGB1-219ENST00000534049 FNDC3AQ9Y2H6 1198 aaKnown RBP7.63□□□□□ -1.19
ITGB1-219ENST00000534049 STARD13Q9Y3M8 1113 aa7.63□□□□□ -1.19
ITGB1-219ENST00000534049 ALBP02768 609 aa7.62□□□□□ -1.19
ITGB1-219ENST00000534049 GRNP28799 593 aaKnown RBP7.62□□□□□ -1.19
ITGB1-219ENST00000534049 GPLD1P80108 840 aa7.62□□□□□ -1.19
ITGB1-219ENST00000534049 DHX32Q7L7V1 743 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms