RNA–Protein interactions for RNA: ENST00000515467.2

SDHAP3-202, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 3, humanhuman

BASIC

Gene SDHAP3, Length 728 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP3-202ENST00000515467 ZNF622Q969S3 477 aaKnown RBP eCLIP20.34■□□□□ 0.85
SDHAP3-202ENST00000515467 MASTLQ96GX5 879 aa20.34■□□□□ 0.85
SDHAP3-202ENST00000515467 METTL22Q9BUU2 404 aaPredicted RBP20.34■□□□□ 0.85
SDHAP3-202ENST00000515467 TRMT112Q9UI30 125 aaKnown RBP20.34■□□□□ 0.85
SDHAP3-202ENST00000515467 WWC3Q9ULE0 1092 aa20.34■□□□□ 0.85
SDHAP3-202ENST00000515467 NUP98P52948 1817 aa20.33■□□□□ 0.85
SDHAP3-202ENST00000515467 SLC10A5Q5PT55 438 aa20.33■□□□□ 0.85
SDHAP3-202ENST00000515467 G2E3Q7L622 706 aa20.33■□□□□ 0.85
SDHAP3-202ENST00000515467 CNKSR1Q969H4 720 aa20.33■□□□□ 0.85
SDHAP3-202ENST00000515467 MAP3K2Q9Y2U5 619 aa20.33■□□□□ 0.85
SDHAP3-202ENST00000515467 CHD4Q14839 1912 aa20.33■□□□□ 0.84
SDHAP3-202ENST00000515467 ATP5J2-PTCD1G3V325 749 aa20.32■□□□□ 0.84
SDHAP3-202ENST00000515467 NPR1P16066 1061 aa20.32■□□□□ 0.84
SDHAP3-202ENST00000515467 NEXNQ0ZGT2 675 aa20.32■□□□□ 0.84
SDHAP3-202ENST00000515467 FKBP5Q13451 457 aaPredicted RBP20.32■□□□□ 0.84
SDHAP3-202ENST00000515467 CCDC191Q8NCU4 936 aa20.32■□□□□ 0.84
SDHAP3-202ENST00000515467 MYD88Q99836 296 aa20.32■□□□□ 0.84
SDHAP3-202ENST00000515467 SH3TC1Q8TE82 1336 aa20.31■□□□□ 0.84
SDHAP3-202ENST00000515467 HSP90B1P14625 803 aaKnown RBP20.31■□□□□ 0.84
SDHAP3-202ENST00000515467 NLRP3Q96P20 1036 aa20.31■□□□□ 0.84
SDHAP3-202ENST00000515467 RIC1Q4ADV7 1423 aa20.3■□□□□ 0.84
SDHAP3-202ENST00000515467 ALDH1B1P30837 517 aa20.29■□□□□ 0.84
SDHAP3-202ENST00000515467 ALDH1L2Q3SY69 923 aa20.29■□□□□ 0.84
SDHAP3-202ENST00000515467 CRY2Q49AN0 593 aa20.29■□□□□ 0.84
SDHAP3-202ENST00000515467 ARHGAP27Q6ZUM4 889 aa20.29■□□□□ 0.84
SDHAP3-202ENST00000515467 CWC25Q9NXE8 425 aaPredicted RBP20.29■□□□□ 0.84
SDHAP3-202ENST00000515467 KIAA1551Q9HCM1 1747 aa20.28■□□□□ 0.84
SDHAP3-202ENST00000515467 DNAAF4Q8WXU2 420 aa20.28■□□□□ 0.84
SDHAP3-202ENST00000515467 ADCY9O60503 1353 aa20.28■□□□□ 0.84
SDHAP3-202ENST00000515467 ABCC12Q96J65 1359 aa20.28■□□□□ 0.84
SDHAP3-202ENST00000515467 N4BP2Q86UW6 1770 aaPredicted RBP20.28■□□□□ 0.84
SDHAP3-202ENST00000515467 ZBTB38Q8NAP3 1195 aaPredicted RBP20.27■□□□□ 0.84
SDHAP3-202ENST00000515467 RPGRQ92834 1020 aaKnown RBP20.27■□□□□ 0.84
SDHAP3-202ENST00000515467 RBM17Q96I25 401 aaKnown RBP20.27■□□□□ 0.84
SDHAP3-202ENST00000515467 ZBED9Q6R2W3 1325 aa20.27■□□□□ 0.83
SDHAP3-202ENST00000515467 PCCAP05165 728 aaPredicted RBP20.26■□□□□ 0.83
SDHAP3-202ENST00000515467 HOXA10P31260 410 aaPredicted RBP20.26■□□□□ 0.83
SDHAP3-202ENST00000515467 MRPL50Q8N5N7 158 aaKnown RBP20.26■□□□□ 0.83
SDHAP3-202ENST00000515467 FAM89AQ96GI7 184 aa20.26■□□□□ 0.83
SDHAP3-202ENST00000515467 IGKV5-2P06315 115 aa20.25■□□□□ 0.83
SDHAP3-202ENST00000515467 HCLS1P14317 486 aaPredicted RBP20.25■□□□□ 0.83
SDHAP3-202ENST00000515467 SOGA3Q5TF21 947 aa20.25■□□□□ 0.83
SDHAP3-202ENST00000515467 PRPF40BQ6NWY9 871 aaKnown RBP20.25■□□□□ 0.83
SDHAP3-202ENST00000515467 SYNE4Q8N205 404 aa20.25■□□□□ 0.83
SDHAP3-202ENST00000515467 LINS1Q8NG48 757 aa20.25■□□□□ 0.83
SDHAP3-202ENST00000515467 SSH1Q8WYL5 1049 aa20.25■□□□□ 0.83
SDHAP3-202ENST00000515467 CRAMP1Q96RY5 1269 aa20.25■□□□□ 0.83
SDHAP3-202ENST00000515467 IRS4O14654 1257 aaPredicted RBP20.24■□□□□ 0.83
SDHAP3-202ENST00000515467 NEURL1BA8MQ27 555 aa20.23■□□□□ 0.83
SDHAP3-202ENST00000515467 ANKRD31Q8N7Z5 1873 aa20.23■□□□□ 0.83
SDHAP3-202ENST00000515467 PTPRCP08575 1304 aa20.23■□□□□ 0.83
SDHAP3-202ENST00000515467 CACNA1FO60840 1977 aa20.23■□□□□ 0.83
SDHAP3-202ENST00000515467 C21orf2O43822 256 aa20.22■□□□□ 0.83
SDHAP3-202ENST00000515467 SMC4Q9NTJ3 1288 aa20.22■□□□□ 0.83
SDHAP3-202ENST00000515467 SF3B3Q15393 1217 aaKnown RBP20.21■□□□□ 0.83
SDHAP3-202ENST00000515467 CWF19L2Q2TBE0 894 aaKnown RBP20.21■□□□□ 0.83
SDHAP3-202ENST00000515467 RTL5Q5HYW3 569 aaPredicted RBP20.21■□□□□ 0.83
SDHAP3-202ENST00000515467 C3orf67Q6ZVT6 689 aa20.21■□□□□ 0.83
SDHAP3-202ENST00000515467 DDX46Q7L014 1031 aaKnown RBP20.21■□□□□ 0.83
SDHAP3-202ENST00000515467 ANKRD36CQ5JPF3 1778 aa20.21■□□□□ 0.83
SDHAP3-202ENST00000515467 F6X3S4 739 aa20.2■□□□□ 0.82
SDHAP3-202ENST00000515467 BRPF1P55201 1214 aaPredicted RBP20.2■□□□□ 0.82
SDHAP3-202ENST00000515467 GCKRQ14397 625 aa20.2■□□□□ 0.82
SDHAP3-202ENST00000515467 CC2D2BQ6DHV5 1058 aa20.2■□□□□ 0.82
SDHAP3-202ENST00000515467 C7orf43Q8WVR3 580 aa20.2■□□□□ 0.82
SDHAP3-202ENST00000515467 ZNF219Q9P2Y4 722 aaPredicted RBP20.2■□□□□ 0.82
SDHAP3-202ENST00000515467 GOLGB1Q14789 3259 aaKnown RBP20.19■□□□□ 0.82
SDHAP3-202ENST00000515467 ARFGEF2Q9Y6D5 1785 aa20.19■□□□□ 0.82
SDHAP3-202ENST00000515467 H7C1W4 665 aa20.19■□□□□ 0.82
SDHAP3-202ENST00000515467 PDE8AO60658 829 aa20.19■□□□□ 0.82
SDHAP3-202ENST00000515467 BBOX1O75936 387 aa20.19■□□□□ 0.82
SDHAP3-202ENST00000515467 RARSP54136 660 aaKnown RBP20.19■□□□□ 0.82
SDHAP3-202ENST00000515467 GRIPAP1Q4V328 841 aa20.19■□□□□ 0.82
SDHAP3-202ENST00000515467 BEND3Q5T5X7 828 aa20.19■□□□□ 0.82
SDHAP3-202ENST00000515467 TMX4Q9H1E5 349 aaPredicted RBP20.19■□□□□ 0.82
SDHAP3-202ENST00000515467 BRCA1P38398 1863 aaKnown RBP20.19■□□□□ 0.82
SDHAP3-202ENST00000515467 CDHR2Q9BYE9 1310 aa20.19■□□□□ 0.82
SDHAP3-202ENST00000515467 ALDH1L1O75891 902 aa20.18■□□□□ 0.82
SDHAP3-202ENST00000515467 C1QTNF8P60827 252 aa20.18■□□□□ 0.82
SDHAP3-202ENST00000515467 CCDC93Q567U6 631 aa20.18■□□□□ 0.82
SDHAP3-202ENST00000515467 RTKN2Q8IZC4 609 aa20.18■□□□□ 0.82
SDHAP3-202ENST00000515467 BCL2L13Q9BXK5 485 aa20.18■□□□□ 0.82
SDHAP3-202ENST00000515467 DLEC1Q9Y238 1755 aa20.18■□□□□ 0.82
SDHAP3-202ENST00000515467 SLC4A10Q6U841 1118 aa20.17■□□□□ 0.82
SDHAP3-202ENST00000515467 SRCIN1Q9C0H9 1055 aa20.17■□□□□ 0.82
SDHAP3-202ENST00000515467 GRAPQ13588 217 aa20.16■□□□□ 0.82
SDHAP3-202ENST00000515467 CCDC152Q4G0S7 254 aa20.16■□□□□ 0.82
SDHAP3-202ENST00000515467 TMC4Q7Z404 712 aa20.16■□□□□ 0.82
SDHAP3-202ENST00000515467 GRAPLQ8TC17 118 aaPredicted RBP20.16■□□□□ 0.82
SDHAP3-202ENST00000515467 JARID2Q92833 1246 aaPredicted RBP20.16■□□□□ 0.82
SDHAP3-202ENST00000515467 ARFGEF1Q9Y6D6 1849 aa20.16■□□□□ 0.82
SDHAP3-202ENST00000515467 PPEF1O14829 653 aaPredicted RBP20.15■□□□□ 0.82
SDHAP3-202ENST00000515467 LMNB1P20700 586 aa20.15■□□□□ 0.82
SDHAP3-202ENST00000515467 C9orf131Q5VYM1 1079 aa20.15■□□□□ 0.82
SDHAP3-202ENST00000515467 UBE3BQ7Z3V4 1068 aa20.15■□□□□ 0.82
SDHAP3-202ENST00000515467 ABCC4O15439 1325 aa20.15■□□□□ 0.82
SDHAP3-202ENST00000515467 LTBP3Q9NS15 1303 aa20.15■□□□□ 0.82
SDHAP3-202ENST00000515467 COL11A2P13942 1736 aaPredicted RBP20.15■□□□□ 0.82
SDHAP3-202ENST00000515467 NFKBIEO00221 500 aa20.14■□□□□ 0.81
SDHAP3-202ENST00000515467 API5Q9BZZ5 524 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms