RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-208ENST00000495777 ZNF34Q8IZ26 560 aa11.63□□□□□ -0.55
SORT1-208ENST00000495777 KDM3BQ7LBC6 1761 aa11.63□□□□□ -0.55
SORT1-208ENST00000495777 CACNA1SQ13698 1873 aa11.63□□□□□ -0.55
SORT1-208ENST00000495777 RASSF10A6NK89 507 aa11.62□□□□□ -0.55
SORT1-208ENST00000495777 NTSR2O95665 410 aa11.62□□□□□ -0.55
SORT1-208ENST00000495777 SUSD4Q5VX71 490 aa11.62□□□□□ -0.55
SORT1-208ENST00000495777 GIGYF2Q6Y7W6 1299 aaKnown RBP11.62□□□□□ -0.55
SORT1-208ENST00000495777 KIF6Q6ZMV9 814 aa11.62□□□□□ -0.55
SORT1-208ENST00000495777 LRP10Q7Z4F1 713 aa11.62□□□□□ -0.55
SORT1-208ENST00000495777 CNTROBQ8N137 903 aa11.62□□□□□ -0.55
SORT1-208ENST00000495777 NGEFQ8N5V2 710 aa11.62□□□□□ -0.55
SORT1-208ENST00000495777 JDP2Q8WYK2 163 aa11.62□□□□□ -0.55
SORT1-208ENST00000495777 CRAMP1Q96RY5 1269 aa11.62□□□□□ -0.55
SORT1-208ENST00000495777 PRDM10Q9NQV6 1147 aa11.62□□□□□ -0.55
SORT1-208ENST00000495777 RRP7AQ9Y3A4 280 aaKnown RBP11.62□□□□□ -0.55
SORT1-208ENST00000495777 NEFMP07197 916 aa11.61□□□□□ -0.55
SORT1-208ENST00000495777 GPTP24298 496 aa11.61□□□□□ -0.55
SORT1-208ENST00000495777 THUMPD2Q9BTF0 503 aaKnown RBP11.61□□□□□ -0.55
SORT1-208ENST00000495777 ZBTB3Q9H5J0 574 aa11.61□□□□□ -0.55
SORT1-208ENST00000495777 WBP1LQ9NX94 342 aa11.61□□□□□ -0.55
SORT1-208ENST00000495777 MYL6BP14649 208 aa11.6□□□□□ -0.55
SORT1-208ENST00000495777 CTCFP49711 727 aaPredicted RBP11.6□□□□□ -0.55
SORT1-208ENST00000495777 SCNN1DP51172 638 aa11.6□□□□□ -0.55
SORT1-208ENST00000495777 EIF6P56537 245 aaKnown RBP11.6□□□□□ -0.55
SORT1-208ENST00000495777 PDIA6Q15084 440 aa11.6□□□□□ -0.55
SORT1-208ENST00000495777 MAP1SQ66K74 1059 aaPredicted RBP11.6□□□□□ -0.55
SORT1-208ENST00000495777 C3orf67Q6ZVT6 689 aa11.6□□□□□ -0.55
SORT1-208ENST00000495777 SLC51AQ86UW1 340 aa11.6□□□□□ -0.55
SORT1-208ENST00000495777 RPGRQ92834 1020 aaKnown RBP11.6□□□□□ -0.55
SORT1-208ENST00000495777 RBM17Q96I25 401 aaKnown RBP11.6□□□□□ -0.55
SORT1-208ENST00000495777 CLEC11AQ9Y240 323 aa11.6□□□□□ -0.55
SORT1-208ENST00000495777 PPEF1O14829 653 aaPredicted RBP11.59□□□□□ -0.55
SORT1-208ENST00000495777 PARP10Q53GL7 1025 aa11.59□□□□□ -0.55
SORT1-208ENST00000495777 SLC10A5Q5PT55 438 aa11.59□□□□□ -0.55
SORT1-208ENST00000495777 VPS33BQ9H267 617 aa11.59□□□□□ -0.55
SORT1-208ENST00000495777 PNNQ9H307 717 aaKnown RBP11.59□□□□□ -0.55
SORT1-208ENST00000495777 LTBP1Q14766 1721 aa11.58□□□□□ -0.56
SORT1-208ENST00000495777 DEFB115Q30KQ5 88 aa11.58□□□□□ -0.56
SORT1-208ENST00000495777 PPP1R42Q7Z4L9 355 aa11.58□□□□□ -0.56
SORT1-208ENST00000495777 LARGE2Q8N3Y3 721 aa11.58□□□□□ -0.56
SORT1-208ENST00000495777 AIDAQ96BJ3 306 aa11.58□□□□□ -0.56
SORT1-208ENST00000495777 DDX21Q9NR30 783 aaKnown RBP eCLIP11.58□□□□□ -0.56
SORT1-208ENST00000495777 BABAM1Q9NWV8 329 aa11.58□□□□□ -0.56
SORT1-208ENST00000495777 ATP6V0A2Q9Y487 856 aa11.58□□□□□ -0.56
SORT1-208ENST00000495777 MAPK8IP3Q9UPT6 1336 aa11.58□□□□□ -0.56
SORT1-208ENST00000495777 LMOD1P29536 600 aaPredicted RBP11.57□□□□□ -0.56
SORT1-208ENST00000495777 EPS15P42566 896 aa11.57□□□□□ -0.56
SORT1-208ENST00000495777 USP50Q70EL3 339 aaPredicted RBP11.57□□□□□ -0.56
SORT1-208ENST00000495777 NLRP3Q96P20 1036 aa11.57□□□□□ -0.56
SORT1-208ENST00000495777 RTFDC1Q9BY42 306 aaPredicted RBP11.57□□□□□ -0.56
SORT1-208ENST00000495777 TSPYL4Q9UJ04 414 aa11.57□□□□□ -0.56
SORT1-208ENST00000495777 GJA3Q9Y6H8 435 aa11.57□□□□□ -0.56
SORT1-208ENST00000495777 WDR33Q9C0J8 1336 aaKnown RBP11.57□□□□□ -0.56
SORT1-208ENST00000495777 NUP98P52948 1817 aa11.56□□□□□ -0.56
SORT1-208ENST00000495777 DDX10Q13206 875 aaKnown RBP11.56□□□□□ -0.56
SORT1-208ENST00000495777 PROSER3Q2NL68 480 aa11.56□□□□□ -0.56
SORT1-208ENST00000495777 NIM1KQ8IY84 436 aa11.56□□□□□ -0.56
SORT1-208ENST00000495777 UTP14AQ9BVJ6 771 aaKnown RBP11.56□□□□□ -0.56
SORT1-208ENST00000495777 DLG5Q8TDM6 1919 aa11.56□□□□□ -0.56
SORT1-208ENST00000495777 ABCC4O15439 1325 aa11.56□□□□□ -0.56
SORT1-208ENST00000495777 PPIP5K2O43314 1243 aa11.55□□□□□ -0.56
SORT1-208ENST00000495777 HSPA8P11142 646 aaKnown RBP11.55□□□□□ -0.56
SORT1-208ENST00000495777 MAP2K1Q02750 393 aaPredicted RBP11.55□□□□□ -0.56
SORT1-208ENST00000495777 AOC3Q16853 763 aa11.55□□□□□ -0.56
SORT1-208ENST00000495777 GPRC5DQ9NZD1 345 aa11.55□□□□□ -0.56
SORT1-208ENST00000495777 ABT1Q9ULW3 272 aaKnown RBP11.55□□□□□ -0.56
SORT1-208ENST00000495777 THSD7BQ9C0I4 1608 aa11.55□□□□□ -0.56
SORT1-208ENST00000495777 BBOX1O75936 387 aa11.54□□□□□ -0.56
SORT1-208ENST00000495777 LBX1P52954 281 aa11.54□□□□□ -0.56
SORT1-208ENST00000495777 RIPK4P57078 832 aa11.54□□□□□ -0.56
SORT1-208ENST00000495777 FMR1Q06787 632 aaKnown RBP eCLIP11.54□□□□□ -0.56
SORT1-208ENST00000495777 CST9Q5W186 159 aa11.54□□□□□ -0.56
SORT1-208ENST00000495777 NLRP10Q86W26 655 aa11.54□□□□□ -0.56
SORT1-208ENST00000495777 SUPT20HQ8NEM7 779 aa11.54□□□□□ -0.56
SORT1-208ENST00000495777 ADARB2Q9NS39 739 aaKnown RBP11.54□□□□□ -0.56
SORT1-208ENST00000495777 ZNRF3Q9ULT6 936 aa11.54□□□□□ -0.56
SORT1-208ENST00000495777 CDHR2Q9BYE9 1310 aa11.54□□□□□ -0.56
SORT1-208ENST00000495777 TCERG1O14776 1098 aaKnown RBP11.53□□□□□ -0.56
SORT1-208ENST00000495777 ANXA1P04083 346 aa11.53□□□□□ -0.56
SORT1-208ENST00000495777 EIF2S2P20042 333 aaKnown RBP11.53□□□□□ -0.56
SORT1-208ENST00000495777 TMPOP42166 694 aaKnown RBP11.53□□□□□ -0.56
SORT1-208ENST00000495777 CXCL9Q07325 125 aa11.53□□□□□ -0.56
SORT1-208ENST00000495777 LMOD3Q0VAK6 560 aa11.53□□□□□ -0.56
SORT1-208ENST00000495777 KIAA2012Q0VF49 1180 aa11.53□□□□□ -0.56
SORT1-208ENST00000495777 HSP90AB3PQ58FF7 597 aa11.53□□□□□ -0.56
SORT1-208ENST00000495777 SP8Q8IXZ3 490 aa11.53□□□□□ -0.56
SORT1-208ENST00000495777 TMX4Q9H1E5 349 aaPredicted RBP11.53□□□□□ -0.56
SORT1-208ENST00000495777 PGAP2Q9UHJ9 254 aa11.53□□□□□ -0.56
SORT1-208ENST00000495777 TLL2Q9Y6L7 1015 aa11.53□□□□□ -0.56
SORT1-208ENST00000495777 TRAF5O00463 557 aa11.52□□□□□ -0.57
SORT1-208ENST00000495777 HCLS1P14317 486 aaPredicted RBP11.52□□□□□ -0.57
SORT1-208ENST00000495777 ECE1P42892 770 aa11.52□□□□□ -0.57
SORT1-208ENST00000495777 TCIRG1Q13488 830 aa11.52□□□□□ -0.57
SORT1-208ENST00000495777 DPP8Q6V1X1 898 aaPredicted RBP11.52□□□□□ -0.57
SORT1-208ENST00000495777 COPS6Q7L5N1 327 aa11.52□□□□□ -0.57
SORT1-208ENST00000495777 XAGE3Q8WTP9 111 aa11.52□□□□□ -0.57
SORT1-208ENST00000495777 CAPNS2Q96L46 248 aa11.52□□□□□ -0.57
SORT1-208ENST00000495777 CHL1O00533 1208 aa11.51□□□□□ -0.57
SORT1-208ENST00000495777 GMPSP49915 693 aaPredicted RBP11.51□□□□□ -0.57
SORT1-208ENST00000495777 GRAPQ13588 217 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms