RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 RGS3P49796 1198 aa15.88■□□□□ 0.13
NELFE-209ENST00000488426 EIF5P55010 431 aaKnown RBP15.88■□□□□ 0.13
NELFE-209ENST00000488426 TEX13AQ9BXU3 409 aaPredicted RBP15.88■□□□□ 0.13
NELFE-209ENST00000488426 MAP3K2Q9Y2U5 619 aa15.88■□□□□ 0.13
NELFE-209ENST00000488426 USP44Q9H0E7 712 aa15.87■□□□□ 0.13
NELFE-209ENST00000488426 NARFQ9UHQ1 456 aa15.87■□□□□ 0.13
NELFE-209ENST00000488426 COL15A1P39059 1388 aa15.87■□□□□ 0.13
NELFE-209ENST00000488426 CHD4Q14839 1912 aa15.87■□□□□ 0.13
NELFE-209ENST00000488426 ZPR1O75312 459 aa15.86■□□□□ 0.13
NELFE-209ENST00000488426 HMMRO75330 724 aa15.86■□□□□ 0.13
NELFE-209ENST00000488426 STARD3NLO95772 234 aa15.86■□□□□ 0.13
NELFE-209ENST00000488426 MYL6BP14649 208 aa15.86■□□□□ 0.13
NELFE-209ENST00000488426 NUCB1Q02818 461 aa15.86■□□□□ 0.13
NELFE-209ENST00000488426 ZNF784Q8NCA9 323 aaPredicted RBP15.86■□□□□ 0.13
NELFE-209ENST00000488426 XAGE3Q8WTP9 111 aa15.86■□□□□ 0.13
NELFE-209ENST00000488426 PARP3Q9Y6F1 533 aa15.86■□□□□ 0.13
NELFE-209ENST00000488426 ARFGEF2Q9Y6D5 1785 aa15.86■□□□□ 0.13
NELFE-209ENST00000488426 POLRMTO00411 1230 aaKnown RBP15.86■□□□□ 0.13
NELFE-209ENST00000488426 UBTFL1P0CB47 393 aaPredicted RBP15.86■□□□□ 0.13
NELFE-209ENST00000488426 NFIXQ14938 502 aa15.86■□□□□ 0.13
NELFE-209ENST00000488426 LINS1Q8NG48 757 aa15.86■□□□□ 0.13
NELFE-209ENST00000488426 TBC1D2BQ9UPU7 963 aa15.86■□□□□ 0.13
NELFE-209ENST00000488426 ZNF330Q9Y3S2 320 aaPredicted RBP15.86■□□□□ 0.13
NELFE-209ENST00000488426 DPEP1P16444 411 aa15.85■□□□□ 0.13
NELFE-209ENST00000488426 KCNA3P22001 575 aa15.85■□□□□ 0.13
NELFE-209ENST00000488426 COPS6Q7L5N1 327 aa15.85■□□□□ 0.13
NELFE-209ENST00000488426 DCTPP1Q9H773 170 aa15.85■□□□□ 0.13
NELFE-209ENST00000488426 RBM19Q9Y4C8 960 aaKnown RBP15.85■□□□□ 0.13
NELFE-209ENST00000488426 AIMP1Q12904 312 aaKnown RBP15.84■□□□□ 0.13
NELFE-209ENST00000488426 RIC3Q7Z5B4 369 aa15.84■□□□□ 0.13
NELFE-209ENST00000488426 KIAA1551Q9HCM1 1747 aa15.84■□□□□ 0.13
NELFE-209ENST00000488426 C10orf71Q711Q0 1435 aa15.84■□□□□ 0.13
NELFE-209ENST00000488426 HDAC5Q9UQL6 1122 aa15.84■□□□□ 0.13
NELFE-209ENST00000488426 NBPF26B4DH59 902 aa15.83■□□□□ 0.12
NELFE-209ENST00000488426 PDE4AP27815 886 aa15.83■□□□□ 0.12
NELFE-209ENST00000488426 NEXNQ0ZGT2 675 aa15.83■□□□□ 0.12
NELFE-209ENST00000488426 NBPF10Q6P3W6 841 aaKnown RBP15.83■□□□□ 0.12
NELFE-209ENST00000488426 BICDL1Q6ZP65 573 aa15.83■□□□□ 0.12
NELFE-209ENST00000488426 ANKRD13DQ6ZTN6 518 aa15.83■□□□□ 0.12
NELFE-209ENST00000488426 CHD1LQ86WJ1 897 aa15.83■□□□□ 0.12
NELFE-209ENST00000488426 NBPF15Q8N660 670 aa15.83■□□□□ 0.12
NELFE-209ENST00000488426 KIF13BQ9NQT8 1826 aa15.82■□□□□ 0.12
NELFE-209ENST00000488426 GRIN3BO60391 1043 aa15.82■□□□□ 0.12
NELFE-209ENST00000488426 METTL22Q9BUU2 404 aaPredicted RBP15.82■□□□□ 0.12
NELFE-209ENST00000488426 BACH2Q9BYV9 841 aa15.82■□□□□ 0.12
NELFE-209ENST00000488426 LRRFIP2Q9Y608 721 aaKnown RBP15.82■□□□□ 0.12
NELFE-209ENST00000488426 CHRNA5P30532 468 aa15.82■□□□□ 0.12
NELFE-209ENST00000488426 TGFB2P61812 414 aa15.82■□□□□ 0.12
NELFE-209ENST00000488426 ATP8B2P98198 1209 aa15.82■□□□□ 0.12
NELFE-209ENST00000488426 TBC1D9BQ66K14 1250 aa15.82■□□□□ 0.12
NELFE-209ENST00000488426 PLBD2Q8NHP8 589 aa15.82■□□□□ 0.12
NELFE-209ENST00000488426 AFDNP55196 1824 aaKnown RBP15.81■□□□□ 0.12
NELFE-209ENST00000488426 IL6STP40189 918 aaPredicted RBP15.81■□□□□ 0.12
NELFE-209ENST00000488426 FAM161AQ3B820 660 aa15.81■□□□□ 0.12
NELFE-209ENST00000488426 ANKRD45Q5TZF3 282 aa15.81■□□□□ 0.12
NELFE-209ENST00000488426 CCDC24Q8N4L8 307 aa15.81■□□□□ 0.12
NELFE-209ENST00000488426 UTYO14607 1347 aa15.81■□□□□ 0.12
NELFE-209ENST00000488426 BCS1LQ9Y276 419 aa15.8■□□□□ 0.12
NELFE-209ENST00000488426 SERPINB2P05120 415 aa15.8■□□□□ 0.12
NELFE-209ENST00000488426 NBPF7P0C2Y1 421 aaPredicted RBP15.8■□□□□ 0.12
NELFE-209ENST00000488426 ERICH6Q7L0X2 663 aa15.8■□□□□ 0.12
NELFE-209ENST00000488426 LNPKQ9C0E8 428 aa15.8■□□□□ 0.12
NELFE-209ENST00000488426 C9orf78Q9NZ63 289 aaPredicted RBP15.8■□□□□ 0.12
NELFE-209ENST00000488426 GRM8O00222 908 aa15.79■□□□□ 0.12
NELFE-209ENST00000488426 CAMTA2O94983 1202 aa15.79■□□□□ 0.12
NELFE-209ENST00000488426 IGKV5-2P06315 115 aa15.79■□□□□ 0.12
NELFE-209ENST00000488426 CWF19L2Q2TBE0 894 aaKnown RBP15.79■□□□□ 0.12
NELFE-209ENST00000488426 NEURL1BA8MQ27 555 aa15.78■□□□□ 0.12
NELFE-209ENST00000488426 ZBTB47Q9UFB7 747 aaPredicted RBP15.78■□□□□ 0.12
NELFE-209ENST00000488426 CARMIL3Q8ND23 1372 aa15.78■□□□□ 0.12
NELFE-209ENST00000488426 SSH3Q8TE77 659 aa15.78■□□□□ 0.12
NELFE-209ENST00000488426 MYD88Q99836 296 aa15.78■□□□□ 0.12
NELFE-209ENST00000488426 A0A087WZG4 1122 aa15.77■□□□□ 0.11
NELFE-209ENST00000488426 PNMA6EA0A0J9YXQ4 647 aa15.77■□□□□ 0.11
NELFE-209ENST00000488426 MTX1Q13505 466 aa15.77■□□□□ 0.11
NELFE-209ENST00000488426 C8orf34Q49A92 452 aa15.77■□□□□ 0.11
NELFE-209ENST00000488426 DZIP3Q86Y13 1208 aaKnown RBP15.77■□□□□ 0.11
NELFE-209ENST00000488426 POLA2Q14181 598 aa15.76■□□□□ 0.11
NELFE-209ENST00000488426 GCKRQ14397 625 aa15.76■□□□□ 0.11
NELFE-209ENST00000488426 TTLL7Q6ZT98 887 aa15.76■□□□□ 0.11
NELFE-209ENST00000488426 BRCA1P38398 1863 aaKnown RBP15.75■□□□□ 0.11
NELFE-209ENST00000488426 PPP1R42Q7Z4L9 355 aa15.75■□□□□ 0.11
NELFE-209ENST00000488426 HLFQ16534 295 aa15.74■□□□□ 0.11
NELFE-209ENST00000488426 PIM2Q9P1W9 311 aa15.74■□□□□ 0.11
NELFE-209ENST00000488426 NRXN2Q9P2S2 1712 aa15.74■□□□□ 0.11
NELFE-209ENST00000488426 PRR5LQ6MZQ0 368 aa15.74■□□□□ 0.11
NELFE-209ENST00000488426 KIF6Q6ZMV9 814 aa15.74■□□□□ 0.11
NELFE-209ENST00000488426 ARHGAP27Q6ZUM4 889 aa15.74■□□□□ 0.11
NELFE-209ENST00000488426 SRGAP3O43295 1099 aa15.73■□□□□ 0.11
NELFE-209ENST00000488426 RAB11FIP3O75154 756 aa15.72■□□□□ 0.11
NELFE-209ENST00000488426 SUCLG2Q96I99 432 aa15.72■□□□□ 0.11
NELFE-209ENST00000488426 ANKRD36CQ5JPF3 1778 aa15.72■□□□□ 0.11
NELFE-209ENST00000488426 HSP90AB4PQ58FF6 505 aa15.71■□□□□ 0.11
NELFE-209ENST00000488426 DALRD3Q5D0E6 543 aaKnown RBP15.71■□□□□ 0.11
NELFE-209ENST00000488426 CCDC191Q8NCU4 936 aa15.71■□□□□ 0.11
NELFE-209ENST00000488426 ZNF526Q8TF50 670 aaPredicted RBP15.71■□□□□ 0.11
NELFE-209ENST00000488426 LRRCC1Q9C099 1032 aa15.71■□□□□ 0.11
NELFE-209ENST00000488426 ZBTB3Q9H5J0 574 aa15.71■□□□□ 0.11
NELFE-209ENST00000488426 EXOC6BQ9Y2D4 811 aa15.71■□□□□ 0.11
NELFE-209ENST00000488426 SCN7AQ01118 1682 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms