RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 JDP2Q8WYK2 163 aa22.91■■□□□ 1.26
HMGN1-209ENST00000463631 PRDM10Q9NQV6 1147 aa22.91■■□□□ 1.26
HMGN1-209ENST00000463631 LTBP1Q14766 1721 aa22.91■■□□□ 1.26
HMGN1-209ENST00000463631 VEGFBP49765 207 aa22.9■■□□□ 1.26
HMGN1-209ENST00000463631 RPGRQ92834 1020 aaKnown RBP22.9■■□□□ 1.26
HMGN1-209ENST00000463631 PLEKHF1Q96S99 279 aa22.9■■□□□ 1.26
HMGN1-209ENST00000463631 RASSF10A6NK89 507 aa22.89■■□□□ 1.25
HMGN1-209ENST00000463631 TTLL7Q6ZT98 887 aa22.89■■□□□ 1.25
HMGN1-209ENST00000463631 CLEC11AQ9Y240 323 aa22.89■■□□□ 1.25
HMGN1-209ENST00000463631 THSD7BQ9C0I4 1608 aa22.89■■□□□ 1.25
HMGN1-209ENST00000463631 NFE2L2Q16236 605 aa22.88■■□□□ 1.25
HMGN1-209ENST00000463631 CNTROBQ8N137 903 aa22.88■■□□□ 1.25
HMGN1-209ENST00000463631 CRAMP1Q96RY5 1269 aa22.88■■□□□ 1.25
HMGN1-209ENST00000463631 CTCFP49711 727 aaPredicted RBP22.87■■□□□ 1.25
HMGN1-209ENST00000463631 MAP1SQ66K74 1059 aaPredicted RBP22.87■■□□□ 1.25
HMGN1-209ENST00000463631 ZNF34Q8IZ26 560 aa22.87■■□□□ 1.25
HMGN1-209ENST00000463631 NGEFQ8N5V2 710 aa22.87■■□□□ 1.25
HMGN1-209ENST00000463631 AIDAQ96BJ3 306 aa22.87■■□□□ 1.25
HMGN1-209ENST00000463631 RRP7AQ9Y3A4 280 aaKnown RBP22.87■■□□□ 1.25
HMGN1-209ENST00000463631 NTSR2O95665 410 aa22.86■■□□□ 1.25
HMGN1-209ENST00000463631 GPTP24298 496 aa22.86■■□□□ 1.25
HMGN1-209ENST00000463631 EIF6P56537 245 aaKnown RBP22.86■■□□□ 1.25
HMGN1-209ENST00000463631 GIGYF2Q6Y7W6 1299 aaKnown RBP22.86■■□□□ 1.25
HMGN1-209ENST00000463631 ZBTB3Q9H5J0 574 aa22.86■■□□□ 1.25
HMGN1-209ENST00000463631 WBP1LQ9NX94 342 aa22.86■■□□□ 1.25
HMGN1-209ENST00000463631 MYL6BP14649 208 aa22.85■■□□□ 1.25
HMGN1-209ENST00000463631 SCNN1DP51172 638 aa22.84■■□□□ 1.25
HMGN1-209ENST00000463631 SUSD4Q5VX71 490 aa22.84■■□□□ 1.25
HMGN1-209ENST00000463631 RBM17Q96I25 401 aaKnown RBP22.84■■□□□ 1.25
HMGN1-209ENST00000463631 THUMPD2Q9BTF0 503 aaKnown RBP22.84■■□□□ 1.25
HMGN1-209ENST00000463631 ANKRD36CQ5JPF3 1778 aa22.84■■□□□ 1.25
HMGN1-209ENST00000463631 PPEF1O14829 653 aaPredicted RBP22.83■■□□□ 1.25
HMGN1-209ENST00000463631 LMOD1P29536 600 aaPredicted RBP22.83■■□□□ 1.25
HMGN1-209ENST00000463631 PARP10Q53GL7 1025 aa22.83■■□□□ 1.25
HMGN1-209ENST00000463631 LRP10Q7Z4F1 713 aa22.83■■□□□ 1.25
HMGN1-209ENST00000463631 LARGE2Q8N3Y3 721 aa22.83■■□□□ 1.25
HMGN1-209ENST00000463631 DEFB115Q30KQ5 88 aa22.82■■□□□ 1.24
HMGN1-209ENST00000463631 PNNQ9H307 717 aaKnown RBP22.82■■□□□ 1.24
HMGN1-209ENST00000463631 DDX21Q9NR30 783 aaKnown RBP eCLIP22.82■■□□□ 1.24
HMGN1-209ENST00000463631 GJA3Q9Y6H8 435 aa22.82■■□□□ 1.24
HMGN1-209ENST00000463631 MAPK8IP3Q9UPT6 1336 aa22.82■■□□□ 1.24
HMGN1-209ENST00000463631 TRPM7Q96QT4 1865 aa22.81■■□□□ 1.24
HMGN1-209ENST00000463631 C3orf67Q6ZVT6 689 aa22.81■■□□□ 1.24
HMGN1-209ENST00000463631 PPP1R42Q7Z4L9 355 aa22.81■■□□□ 1.24
HMGN1-209ENST00000463631 LAMB2P55268 1798 aa22.81■■□□□ 1.24
HMGN1-209ENST00000463631 USP50Q70EL3 339 aaPredicted RBP22.8■■□□□ 1.24
HMGN1-209ENST00000463631 VPS33BQ9H267 617 aa22.8■■□□□ 1.24
HMGN1-209ENST00000463631 WDR33Q9C0J8 1336 aaKnown RBP22.8■■□□□ 1.24
HMGN1-209ENST00000463631 EPS15P42566 896 aa22.79■■□□□ 1.24
HMGN1-209ENST00000463631 PDIA6Q15084 440 aa22.79■■□□□ 1.24
HMGN1-209ENST00000463631 SLC10A5Q5PT55 438 aa22.79■■□□□ 1.24
HMGN1-209ENST00000463631 SLC51AQ86UW1 340 aa22.79■■□□□ 1.24
HMGN1-209ENST00000463631 NIM1KQ8IY84 436 aa22.79■■□□□ 1.24
HMGN1-209ENST00000463631 ATP6V0A2Q9Y487 856 aa22.79■■□□□ 1.24
HMGN1-209ENST00000463631 MAP2K1Q02750 393 aaPredicted RBP22.78■■□□□ 1.24
HMGN1-209ENST00000463631 NLRP3Q96P20 1036 aa22.78■■□□□ 1.24
HMGN1-209ENST00000463631 BABAM1Q9NWV8 329 aa22.78■■□□□ 1.24
HMGN1-209ENST00000463631 TSPYL4Q9UJ04 414 aa22.78■■□□□ 1.24
HMGN1-209ENST00000463631 ABT1Q9ULW3 272 aaKnown RBP22.78■■□□□ 1.24
HMGN1-209ENST00000463631 LBX1P52954 281 aa22.77■■□□□ 1.24
HMGN1-209ENST00000463631 RTFDC1Q9BY42 306 aaPredicted RBP22.77■■□□□ 1.24
HMGN1-209ENST00000463631 PPIP5K2O43314 1243 aa22.76■■□□□ 1.23
HMGN1-209ENST00000463631 HSPA8P11142 646 aaKnown RBP22.76■■□□□ 1.23
HMGN1-209ENST00000463631 UTP14AQ9BVJ6 771 aaKnown RBP22.76■■□□□ 1.23
HMGN1-209ENST00000463631 ABCC4O15439 1325 aa22.76■■□□□ 1.23
HMGN1-209ENST00000463631 TMX4Q9H1E5 349 aaPredicted RBP22.75■■□□□ 1.23
HMGN1-209ENST00000463631 GPRC5DQ9NZD1 345 aa22.75■■□□□ 1.23
HMGN1-209ENST00000463631 CDHR2Q9BYE9 1310 aa22.75■■□□□ 1.23
HMGN1-209ENST00000463631 LRRC37AA6NMS7 1700 aa22.74■■□□□ 1.23
HMGN1-209ENST00000463631 AOC3Q16853 763 aa22.74■■□□□ 1.23
HMGN1-209ENST00000463631 SUPT20HQ8NEM7 779 aa22.74■■□□□ 1.23
HMGN1-209ENST00000463631 ADARB2Q9NS39 739 aaKnown RBP22.74■■□□□ 1.23
HMGN1-209ENST00000463631 ZNRF3Q9ULT6 936 aa22.74■■□□□ 1.23
HMGN1-209ENST00000463631 TCERG1O14776 1098 aaKnown RBP22.73■■□□□ 1.23
HMGN1-209ENST00000463631 ECE1P42892 770 aa22.73■■□□□ 1.23
HMGN1-209ENST00000463631 PROSER3Q2NL68 480 aa22.73■■□□□ 1.23
HMGN1-209ENST00000463631 BBOX1O75936 387 aa22.72■■□□□ 1.23
HMGN1-209ENST00000463631 HSP90AB3PQ58FF7 597 aa22.72■■□□□ 1.23
HMGN1-209ENST00000463631 CAPNS2Q96L46 248 aa22.72■■□□□ 1.23
HMGN1-209ENST00000463631 DUOX1Q9NRD9 1551 aa22.72■■□□□ 1.23
HMGN1-209ENST00000463631 FMR1Q06787 632 aaKnown RBP eCLIP22.71■■□□□ 1.23
HMGN1-209ENST00000463631 CXCL9Q07325 125 aa22.71■■□□□ 1.23
HMGN1-209ENST00000463631 CST9Q5W186 159 aa22.71■■□□□ 1.23
HMGN1-209ENST00000463631 SP8Q8IXZ3 490 aa22.71■■□□□ 1.23
HMGN1-209ENST00000463631 TLL2Q9Y6L7 1015 aa22.71■■□□□ 1.23
HMGN1-209ENST00000463631 TRAF5O00463 557 aa22.7■■□□□ 1.22
HMGN1-209ENST00000463631 EIF2S2P20042 333 aaKnown RBP22.7■■□□□ 1.22
HMGN1-209ENST00000463631 RIPK4P57078 832 aa22.7■■□□□ 1.22
HMGN1-209ENST00000463631 LMOD3Q0VAK6 560 aa22.7■■□□□ 1.22
HMGN1-209ENST00000463631 KIAA2012Q0VF49 1180 aa22.7■■□□□ 1.22
HMGN1-209ENST00000463631 NLRP10Q86W26 655 aa22.7■■□□□ 1.22
HMGN1-209ENST00000463631 ANXA1P04083 346 aa22.69■■□□□ 1.22
HMGN1-209ENST00000463631 DPP8Q6V1X1 898 aaPredicted RBP22.69■■□□□ 1.22
HMGN1-209ENST00000463631 GMPSP49915 693 aaPredicted RBP22.68■■□□□ 1.22
HMGN1-209ENST00000463631 PGAP2Q9UHJ9 254 aa22.68■■□□□ 1.22
HMGN1-209ENST00000463631 DDX60Q8IY21 1712 aaKnown RBP22.68■■□□□ 1.22
HMGN1-209ENST00000463631 SH3TC1Q8TE82 1336 aa22.67■■□□□ 1.22
HMGN1-209ENST00000463631 TMPOP42166 694 aaKnown RBP22.67■■□□□ 1.22
HMGN1-209ENST00000463631 CYP4F22Q6NT55 531 aa22.67■■□□□ 1.22
HMGN1-209ENST00000463631 COPS6Q7L5N1 327 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms