RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 MARK1Q9P0L2 795 aa4.64□□□□□ -1.67
XRCC4-203ENST00000396027 ZCCHC6Q5VYS8 1495 aaKnown RBP4.64□□□□□ -1.67
XRCC4-203ENST00000396027 DBX1A6NMT0 343 aa4.63□□□□□ -1.67
XRCC4-203ENST00000396027 LILRB5O75023 590 aa4.63□□□□□ -1.67
XRCC4-203ENST00000396027 LETM1O95202 739 aaPredicted RBP4.63□□□□□ -1.67
XRCC4-203ENST00000396027 IL2RAP01589 272 aa4.63□□□□□ -1.67
XRCC4-203ENST00000396027 MMP14P50281 582 aa4.63□□□□□ -1.67
XRCC4-203ENST00000396027 FHDC1Q9C0D6 1143 aaPredicted RBP4.63□□□□□ -1.67
XRCC4-203ENST00000396027 YY1AP1Q9H869 796 aa4.63□□□□□ -1.67
XRCC4-203ENST00000396027 HRH3Q9Y5N1 445 aa4.63□□□□□ -1.67
XRCC4-203ENST00000396027 WNT11O96014 354 aa4.62□□□□□ -1.67
XRCC4-203ENST00000396027 SPINK2P20155 84 aa4.62□□□□□ -1.67
XRCC4-203ENST00000396027 IRX3P78415 501 aaPredicted RBP4.62□□□□□ -1.67
XRCC4-203ENST00000396027 CTDSPL2Q05D32 466 aa4.62□□□□□ -1.67
XRCC4-203ENST00000396027 OSBPL3Q9H4L5 887 aa4.62□□□□□ -1.67
XRCC4-203ENST00000396027 RAB6BQ9NRW1 208 aa4.62□□□□□ -1.67
XRCC4-203ENST00000396027 PRDM4Q9UKN5 801 aa4.62□□□□□ -1.67
XRCC4-203ENST00000396027 HCN2Q9UL51 889 aa4.62□□□□□ -1.67
XRCC4-203ENST00000396027 GIGYF1O75420 1035 aaPredicted RBP4.62□□□□□ -1.67
XRCC4-203ENST00000396027 CALRP27797 417 aaKnown RBP4.62□□□□□ -1.67
XRCC4-203ENST00000396027 FAM193AP78312 1265 aa4.62□□□□□ -1.67
XRCC4-203ENST00000396027 NR6A1Q15406 480 aa4.62□□□□□ -1.67
XRCC4-203ENST00000396027 C20orf204Q6ZNR8 217 aa4.62□□□□□ -1.67
XRCC4-203ENST00000396027 XAGE2Q96GT9 111 aa4.62□□□□□ -1.67
XRCC4-203ENST00000396027 ZIC5Q96T25 663 aa4.62□□□□□ -1.67
XRCC4-203ENST00000396027 DNAJC2Q99543 621 aaKnown RBP4.62□□□□□ -1.67
XRCC4-203ENST00000396027 TCERG1O14776 1098 aaKnown RBP4.61□□□□□ -1.67
XRCC4-203ENST00000396027 IREB2P48200 963 aaKnown RBP4.61□□□□□ -1.67
XRCC4-203ENST00000396027 SH3D19Q5HYK7 790 aa4.61□□□□□ -1.67
XRCC4-203ENST00000396027 DHX37Q8IY37 1157 aaKnown RBP4.61□□□□□ -1.67
XRCC4-203ENST00000396027 FMR1NBQ8N0W7 255 aaPredicted RBP4.61□□□□□ -1.67
XRCC4-203ENST00000396027 NCANO14594 1321 aa4.6□□□□□ -1.67
XRCC4-203ENST00000396027 A0A1W2PNR3 127 aa4.6□□□□□ -1.67
XRCC4-203ENST00000396027 PRRG2O14669 202 aa4.6□□□□□ -1.67
XRCC4-203ENST00000396027 APPP05067 770 aa4.6□□□□□ -1.67
XRCC4-203ENST00000396027 ATP4AP20648 1035 aa4.6□□□□□ -1.67
XRCC4-203ENST00000396027 NOS3P29474 1203 aa4.6□□□□□ -1.67
XRCC4-203ENST00000396027 SKIV2LQ15477 1246 aaKnown RBP4.6□□□□□ -1.67
XRCC4-203ENST00000396027 KRTAP19-4Q3LI73 84 aa4.6□□□□□ -1.67
XRCC4-203ENST00000396027 ESCO1Q5FWF5 840 aa4.6□□□□□ -1.67
XRCC4-203ENST00000396027 CC2D1BQ5T0F9 858 aaKnown RBP4.6□□□□□ -1.67
XRCC4-203ENST00000396027 SAMD5Q5TGI4 173 aa4.6□□□□□ -1.67
XRCC4-203ENST00000396027 DTX1Q86Y01 620 aa4.6□□□□□ -1.67
XRCC4-203ENST00000396027 KDM4CQ9H3R0 1056 aa4.6□□□□□ -1.67
XRCC4-203ENST00000396027 ADAMTS4O75173 837 aa4.59□□□□□ -1.67
XRCC4-203ENST00000396027 ADH7P40394 386 aa4.59□□□□□ -1.67
XRCC4-203ENST00000396027 SCTRP47872 440 aa4.59□□□□□ -1.67
XRCC4-203ENST00000396027 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.59□□□□□ -1.67
XRCC4-203ENST00000396027 LRRN4Q8WUT4 740 aa4.59□□□□□ -1.67
XRCC4-203ENST00000396027 WRNQ14191 1432 aaPredicted RBP eCLIP4.59□□□□□ -1.68
XRCC4-203ENST00000396027 EFSO43281 561 aa4.58□□□□□ -1.68
XRCC4-203ENST00000396027 TGFB1P01137 390 aa4.58□□□□□ -1.68
XRCC4-203ENST00000396027 IGLV1-40P01703 118 aa4.58□□□□□ -1.68
XRCC4-203ENST00000396027 CTR9Q6PD62 1173 aa4.58□□□□□ -1.68
XRCC4-203ENST00000396027 CREBRFQ8IUR6 639 aa4.58□□□□□ -1.68
XRCC4-203ENST00000396027 MEGF10Q96KG7 1140 aa4.58□□□□□ -1.68
XRCC4-203ENST00000396027 KRTAP9-3Q9BYQ3 159 aa4.58□□□□□ -1.68
XRCC4-203ENST00000396027 POLR3EQ9NVU0 708 aa4.58□□□□□ -1.68
XRCC4-203ENST00000396027 RBM28Q9NW13 759 aaKnown RBP4.58□□□□□ -1.68
XRCC4-203ENST00000396027 GEMIN8Q9NWZ8 242 aaKnown RBP4.58□□□□□ -1.68
XRCC4-203ENST00000396027 GJA3Q9Y6H8 435 aa4.58□□□□□ -1.68
XRCC4-203ENST00000396027 PLA2G4AP47712 749 aa4.57□□□□□ -1.68
XRCC4-203ENST00000396027 ARSJQ5FYB0 599 aaPredicted RBP4.57□□□□□ -1.68
XRCC4-203ENST00000396027 CASC1Q6TDU7 716 aa4.57□□□□□ -1.68
XRCC4-203ENST00000396027 DTWD1Q8N5C7 304 aa4.57□□□□□ -1.68
XRCC4-203ENST00000396027 RGS22Q8NE09 1264 aa4.57□□□□□ -1.68
XRCC4-203ENST00000396027 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.57□□□□□ -1.68
XRCC4-203ENST00000396027 GPBP1L1Q9HC44 474 aaPredicted RBP4.57□□□□□ -1.68
XRCC4-203ENST00000396027 JUNBP17275 347 aaPredicted RBP4.56□□□□□ -1.68
XRCC4-203ENST00000396027 SSR1P43307 286 aaKnown RBP4.56□□□□□ -1.68
XRCC4-203ENST00000396027 DZIP1LQ8IYY4 767 aaKnown RBP4.56□□□□□ -1.68
XRCC4-203ENST00000396027 FAM117AQ9C073 453 aa4.56□□□□□ -1.68
XRCC4-203ENST00000396027 CHMP4BQ9H444 224 aaKnown RBP4.56□□□□□ -1.68
XRCC4-203ENST00000396027 STRN4Q9NRL3 753 aa4.56□□□□□ -1.68
XRCC4-203ENST00000396027 LOC105371045A0A1W2PR82 267 aa4.56□□□□□ -1.68
XRCC4-203ENST00000396027 CCDC66A2RUB6 948 aa4.56□□□□□ -1.68
XRCC4-203ENST00000396027 MAFGO15525 162 aa4.56□□□□□ -1.68
XRCC4-203ENST00000396027 DMTNQ08495 405 aa4.56□□□□□ -1.68
XRCC4-203ENST00000396027 RALBP1Q15311 655 aa4.56□□□□□ -1.68
XRCC4-203ENST00000396027 HSP90AB3PQ58FF7 597 aa4.56□□□□□ -1.68
XRCC4-203ENST00000396027 DNTTIP2Q5QJE6 756 aaKnown RBP4.56□□□□□ -1.68
XRCC4-203ENST00000396027 SECISBP2LQ93073 1101 aaKnown RBP4.56□□□□□ -1.68
XRCC4-203ENST00000396027 GOPCQ9HD26 462 aa4.56□□□□□ -1.68
XRCC4-203ENST00000396027 PCDHB11Q9Y5F2 797 aa4.56□□□□□ -1.68
XRCC4-203ENST00000396027 B8ZZF3 427 aa4.55□□□□□ -1.68
XRCC4-203ENST00000396027 TATP17735 454 aaPredicted RBP4.55□□□□□ -1.68
XRCC4-203ENST00000396027 MCCD1P59942 119 aaPredicted RBP4.55□□□□□ -1.68
XRCC4-203ENST00000396027 NBPF1Q3BBV0 1214 aa4.55□□□□□ -1.68
XRCC4-203ENST00000396027 IGF2-ASQ6U949 168 aa4.55□□□□□ -1.68
XRCC4-203ENST00000396027 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.55□□□□□ -1.68
XRCC4-203ENST00000396027 ZNF592Q92610 1267 aa4.55□□□□□ -1.68
XRCC4-203ENST00000396027 BSDC1Q9NW68 430 aaPredicted RBP4.55□□□□□ -1.68
XRCC4-203ENST00000396027 HDAC5Q9UQL6 1122 aa4.55□□□□□ -1.68
XRCC4-203ENST00000396027 NINLQ9Y2I6 1382 aa4.54□□□□□ -1.68
XRCC4-203ENST00000396027 NRDCO43847 1150 aa4.54□□□□□ -1.68
XRCC4-203ENST00000396027 MYCP01106 439 aaPredicted RBP4.54□□□□□ -1.68
XRCC4-203ENST00000396027 PROCA1Q8NCQ7 364 aaPredicted RBP4.54□□□□□ -1.68
XRCC4-203ENST00000396027 AIDAQ96BJ3 306 aa4.54□□□□□ -1.68
XRCC4-203ENST00000396027 NIFKQ9BYG3 293 aaKnown RBP4.54□□□□□ -1.68
XRCC4-203ENST00000396027 EFCC1Q9HA90 598 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms