RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 METTL22Q9BUU2 404 aaPredicted RBP19.51■□□□□ 0.71
SNX9-201ENST00000392185 CCDC152Q4G0S7 254 aa19.51■□□□□ 0.71
SNX9-201ENST00000392185 SLC4A8Q2Y0W8 1093 aa19.51■□□□□ 0.71
SNX9-201ENST00000392185 GDPD2Q9HCC8 539 aa19.51■□□□□ 0.71
SNX9-201ENST00000392185 HCLS1P14317 486 aaPredicted RBP19.5■□□□□ 0.71
SNX9-201ENST00000392185 MRE11P49959 708 aa19.5■□□□□ 0.71
SNX9-201ENST00000392185 SUCLG2Q96I99 432 aa19.5■□□□□ 0.71
SNX9-201ENST00000392185 ZNF594Q96JF6 807 aaPredicted RBP19.5■□□□□ 0.71
SNX9-201ENST00000392185 USP44Q9H0E7 712 aa19.5■□□□□ 0.71
SNX9-201ENST00000392185 SETD1BQ9UPS6 1966 aaKnown RBP19.5■□□□□ 0.71
SNX9-201ENST00000392185 PLBD2Q8NHP8 589 aa19.49■□□□□ 0.71
SNX9-201ENST00000392185 ALKQ9UM73 1620 aa19.49■□□□□ 0.71
SNX9-201ENST00000392185 PRAMEF22A3QJZ6 481 aa19.49■□□□□ 0.71
SNX9-201ENST00000392185 USP5P45974 858 aa19.49■□□□□ 0.71
SNX9-201ENST00000392185 NLRP3Q96P20 1036 aa19.49■□□□□ 0.71
SNX9-201ENST00000392185 RANBP6O60518 1105 aaKnown RBP19.48■□□□□ 0.71
SNX9-201ENST00000392185 TNPO1Q92973 898 aaKnown RBP19.48■□□□□ 0.71
SNX9-201ENST00000392185 RBM8AQ9Y5S9 174 aaKnown RBP19.48■□□□□ 0.71
SNX9-201ENST00000392185 PROSER3Q2NL68 480 aa19.48■□□□□ 0.71
SNX9-201ENST00000392185 BRPF3Q9ULD4 1205 aa19.48■□□□□ 0.71
SNX9-201ENST00000392185 ZNF396Q96N95 335 aaPredicted RBP19.48■□□□□ 0.71
SNX9-201ENST00000392185 UTP14AQ9BVJ6 771 aaKnown RBP19.48■□□□□ 0.71
SNX9-201ENST00000392185 ANKRD18AQ8IVF6 992 aa19.47■□□□□ 0.71
SNX9-201ENST00000392185 NECAB1Q8N987 351 aa19.47■□□□□ 0.71
SNX9-201ENST00000392185 DIP2CQ9Y2E4 1556 aa19.47■□□□□ 0.71
SNX9-201ENST00000392185 RIMBP3CA6NJZ7 1639 aa19.47■□□□□ 0.71
SNX9-201ENST00000392185 RIMBP3BA6NNM3 1639 aa19.47■□□□□ 0.71
SNX9-201ENST00000392185 RIMBP3Q9UFD9 1639 aa19.47■□□□□ 0.71
SNX9-201ENST00000392185 CCDC24Q8N4L8 307 aa19.47■□□□□ 0.71
SNX9-201ENST00000392185 GLI2P10070 1586 aa19.47■□□□□ 0.71
SNX9-201ENST00000392185 ERBB3P21860 1342 aa19.47■□□□□ 0.71
SNX9-201ENST00000392185 SPATA32Q96LK8 384 aa19.47■□□□□ 0.71
SNX9-201ENST00000392185 NMIQ13287 307 aaPredicted RBP19.47■□□□□ 0.71
SNX9-201ENST00000392185 GCKRQ14397 625 aa19.47■□□□□ 0.71
SNX9-201ENST00000392185 NDUFB9Q9Y6M9 179 aa19.47■□□□□ 0.71
SNX9-201ENST00000392185 MADDQ8WXG6 1647 aa19.46■□□□□ 0.71
SNX9-201ENST00000392185 GNPATO15228 680 aa19.46■□□□□ 0.71
SNX9-201ENST00000392185 HOOK1Q9UJC3 728 aaKnown RBP19.46■□□□□ 0.71
SNX9-201ENST00000392185 WWC3Q9ULE0 1092 aa19.46■□□□□ 0.71
SNX9-201ENST00000392185 ADGRB3O60242 1522 aa19.46■□□□□ 0.71
SNX9-201ENST00000392185 PPRC1Q5VV67 1664 aaKnown RBP19.46■□□□□ 0.71
SNX9-201ENST00000392185 ABCC4O15439 1325 aa19.46■□□□□ 0.71
SNX9-201ENST00000392185 GLIPR1L2Q4G1C9 344 aa19.46■□□□□ 0.71
SNX9-201ENST00000392185 TTLL7Q6ZT98 887 aa19.46■□□□□ 0.71
SNX9-201ENST00000392185 TMX3Q96JJ7 454 aa19.46■□□□□ 0.71
SNX9-201ENST00000392185 DBNDD2Q9BQY9 259 aa19.45■□□□□ 0.7
SNX9-201ENST00000392185 RTCBQ9Y3I0 505 aaKnown RBP19.45■□□□□ 0.7
SNX9-201ENST00000392185 POLR3DP05423 398 aaPredicted RBP19.45■□□□□ 0.7
SNX9-201ENST00000392185 CHMLP26374 656 aa19.45■□□□□ 0.7
SNX9-201ENST00000392185 NEK1Q96PY6 1258 aa19.45■□□□□ 0.7
SNX9-201ENST00000392185 SLC9C2Q5TAH2 1124 aa19.45■□□□□ 0.7
SNX9-201ENST00000392185 CCDC144CPQ8IYA2 1237 aa19.45■□□□□ 0.7
SNX9-201ENST00000392185 AXIN2Q9Y2T1 843 aa19.45■□□□□ 0.7
SNX9-201ENST00000392185 BRF1Q92994 677 aa19.44■□□□□ 0.7
SNX9-201ENST00000392185 MKNK2Q9HBH9 465 aa19.44■□□□□ 0.7
SNX9-201ENST00000392185 TCEAL9Q9UHQ7 104 aa19.44■□□□□ 0.7
SNX9-201ENST00000392185 IFIT3O14879 490 aaKnown RBP19.44■□□□□ 0.7
SNX9-201ENST00000392185 ZNF622Q969S3 477 aaKnown RBP eCLIP19.44■□□□□ 0.72e-6■■■□□ 15.2
SNX9-201ENST00000392185 SH2B1Q9NRF2 756 aaPredicted RBP19.44■□□□□ 0.7
SNX9-201ENST00000392185 TFIP11Q9UBB9 837 aaKnown RBP19.44■□□□□ 0.7
SNX9-201ENST00000392185 ABCA6Q8N139 1617 aa19.44■□□□□ 0.7
SNX9-201ENST00000392185 INO80Q9ULG1 1556 aaPredicted RBP19.43■□□□□ 0.7
SNX9-201ENST00000392185 BRINP3Q76B58 766 aa19.43■□□□□ 0.7
SNX9-201ENST00000392185 PAG1Q9NWQ8 432 aa19.43■□□□□ 0.7
SNX9-201ENST00000392185 JAG2Q9Y219 1238 aa19.43■□□□□ 0.7
SNX9-201ENST00000392185 GOLGA8BA8MQT2 603 aa19.43■□□□□ 0.7
SNX9-201ENST00000392185 CPA1P15085 419 aa19.42■□□□□ 0.7
SNX9-201ENST00000392185 KIDINS220Q9ULH0 1771 aa19.42■□□□□ 0.7
SNX9-201ENST00000392185 ZNF853P0CG23 659 aa19.42■□□□□ 0.7
SNX9-201ENST00000392185 ASAP1Q9ULH1 1129 aa19.42■□□□□ 0.7
SNX9-201ENST00000392185 CDKL5O76039 1030 aa19.42■□□□□ 0.7
SNX9-201ENST00000392185 TTF1Q15361 905 aaPredicted RBP19.42■□□□□ 0.7
SNX9-201ENST00000392185 MICU3Q86XE3 530 aa19.42■□□□□ 0.7
SNX9-201ENST00000392185 TSPY26PQ9H489 355 aa19.42■□□□□ 0.7
SNX9-201ENST00000392185 TTC41PQ6P2S7 1318 aa19.41■□□□□ 0.7
SNX9-201ENST00000392185 TPTE2Q6XPS3 522 aa19.41■□□□□ 0.7
SNX9-201ENST00000392185 CCDC191Q8NCU4 936 aa19.41■□□□□ 0.7
SNX9-201ENST00000392185 TNMDQ9H2S6 317 aa19.41■□□□□ 0.7
SNX9-201ENST00000392185 UQCRFS1P1P0C7P4 283 aa19.41■□□□□ 0.7
SNX9-201ENST00000392185 MCMDC2Q4G0Z9 681 aa19.41■□□□□ 0.7
SNX9-201ENST00000392185 CCDC47Q96A33 483 aaKnown RBP19.41■□□□□ 0.7
SNX9-201ENST00000392185 TRIM5Q9C035 493 aa19.41■□□□□ 0.7
SNX9-201ENST00000392185 RTL1A6NKG5 1358 aa19.41■□□□□ 0.7
SNX9-201ENST00000392185 A0A1B0GUL7 405 aa19.4■□□□□ 0.7
SNX9-201ENST00000392185 EYA2O00167 538 aa19.4■□□□□ 0.7
SNX9-201ENST00000392185 PCMTD1Q96MG8 357 aaPredicted RBP19.4■□□□□ 0.7
SNX9-201ENST00000392185 CCNL1Q9UK58 526 aaPredicted RBP19.4■□□□□ 0.7
SNX9-201ENST00000392185 SH3TC1Q8TE82 1336 aa19.4■□□□□ 0.7
SNX9-201ENST00000392185 LMTK2Q8IWU2 1503 aa19.4■□□□□ 0.7
SNX9-201ENST00000392185 GJB2P29033 226 aa19.4■□□□□ 0.7
SNX9-201ENST00000392185 NEURL1BA8MQ27 555 aa19.4■□□□□ 0.7
SNX9-201ENST00000392185 FAM182BQ5T319 152 aa19.4■□□□□ 0.7
SNX9-201ENST00000392185 CHST3Q7LGC8 479 aa19.4■□□□□ 0.7
SNX9-201ENST00000392185 TFCP2L1Q9NZI6 479 aa19.4■□□□□ 0.7
SNX9-201ENST00000392185 NSFL1CQ9UNZ2 370 aaKnown RBP19.4■□□□□ 0.7
SNX9-201ENST00000392185 SYCE3A1L190 88 aa19.4■□□□□ 0.7
SNX9-201ENST00000392185 ERVV-2B6SEH9 535 aa19.4■□□□□ 0.7
SNX9-201ENST00000392185 DTNBO60941 627 aa19.4■□□□□ 0.7
SNX9-201ENST00000392185 HMGB1P09429 215 aaKnown RBP19.4■□□□□ 0.7
SNX9-201ENST00000392185 CYP7A1P22680 504 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms