RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 PPP2R5AQ15172 486 aa12.24□□□□□ -0.45
SF3B2-201ENST00000322535 TWISTNBQ3B726 338 aaPredicted RBP12.24□□□□□ -0.45
SF3B2-201ENST00000322535 CLEC17AQ6ZS10 378 aa12.24□□□□□ -0.45
SF3B2-201ENST00000322535 MED4Q9NPJ6 270 aa12.24□□□□□ -0.45
SF3B2-201ENST00000322535 SPTLC3Q9NUV7 552 aa12.24□□□□□ -0.45
SF3B2-201ENST00000322535 TSPYL4Q9UJ04 414 aa12.24□□□□□ -0.45
SF3B2-201ENST00000322535 HCLS1P14317 486 aaPredicted RBP12.23□□□□□ -0.45
SF3B2-201ENST00000322535 GNAI1P63096 354 aa12.23□□□□□ -0.45
SF3B2-201ENST00000322535 LRCH2Q5VUJ6 765 aa12.23□□□□□ -0.45
SF3B2-201ENST00000322535 NFAT5O94916 1531 aa12.23□□□□□ -0.45
SF3B2-201ENST00000322535 ZNF530Q6P9A1 599 aaPredicted RBP12.23□□□□□ -0.45
SF3B2-201ENST00000322535 MED1Q15648 1581 aaPredicted RBP12.22□□□□□ -0.45
SF3B2-201ENST00000322535 ARHGEF10O15013 1369 aa12.22□□□□□ -0.45
SF3B2-201ENST00000322535 NUTM2BA6NNL0 878 aaPredicted RBP12.22□□□□□ -0.45
SF3B2-201ENST00000322535 GNAT3A8MTJ3 354 aa12.22□□□□□ -0.45
SF3B2-201ENST00000322535 NUTM2EB1AL46 878 aaPredicted RBP12.22□□□□□ -0.45
SF3B2-201ENST00000322535 KCNQ3O43525 872 aa12.22□□□□□ -0.45
SF3B2-201ENST00000322535 VAMP4O75379 141 aa12.22□□□□□ -0.45
SF3B2-201ENST00000322535 ADAMTS2O95450 1211 aa12.22□□□□□ -0.45
SF3B2-201ENST00000322535 NUTM2AQ8IVF1 878 aaPredicted RBP12.22□□□□□ -0.45
SF3B2-201ENST00000322535 NEK11Q8NG66 645 aa12.22□□□□□ -0.45
SF3B2-201ENST00000322535 ERBB3P21860 1342 aa12.22□□□□□ -0.45
SF3B2-201ENST00000322535 KIF1CO43896 1103 aaKnown RBP12.22□□□□□ -0.45
SF3B2-201ENST00000322535 TRIM27P14373 513 aa12.22□□□□□ -0.45
SF3B2-201ENST00000322535 MVPQ14764 893 aaKnown RBP12.22□□□□□ -0.45
SF3B2-201ENST00000322535 GTF3C6Q969F1 213 aa12.22□□□□□ -0.45
SF3B2-201ENST00000322535 RGPD5Q99666 1765 aa12.21□□□□□ -0.45
SF3B2-201ENST00000322535 NOL8Q76FK4 1167 aaKnown RBP12.21□□□□□ -0.45
SF3B2-201ENST00000322535 KIAA1524Q8TCG1 905 aa12.21□□□□□ -0.45
SF3B2-201ENST00000322535 ATG3Q9NT62 314 aa12.21□□□□□ -0.45
SF3B2-201ENST00000322535 IFT57Q9NWB7 429 aa12.21□□□□□ -0.45
SF3B2-201ENST00000322535 TBC1D9Q6ZT07 1266 aa12.21□□□□□ -0.45
SF3B2-201ENST00000322535 OTUD6BQ8N6M0 293 aa12.21□□□□□ -0.45
SF3B2-201ENST00000322535 TNS3Q68CZ2 1445 aa12.21□□□□□ -0.46
SF3B2-201ENST00000322535 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.21□□□□□ -0.46
SF3B2-201ENST00000322535 KDRP35968 1356 aa12.2□□□□□ -0.46
SF3B2-201ENST00000322535 ATP2B1P20020 1258 aa12.2□□□□□ -0.46
SF3B2-201ENST00000322535 TOM1L2Q6ZVM7 507 aa12.2□□□□□ -0.46
SF3B2-201ENST00000322535 CCDC112Q8NEF3 446 aa12.2□□□□□ -0.46
SF3B2-201ENST00000322535 KCNF1Q9H3M0 494 aa12.2□□□□□ -0.46
SF3B2-201ENST00000322535 ZDHHC9Q9Y397 364 aa12.2□□□□□ -0.46
SF3B2-201ENST00000322535 MPHOSPH10O00566 681 aaKnown RBP12.2□□□□□ -0.46
SF3B2-201ENST00000322535 ANKRD45Q5TZF3 282 aa12.2□□□□□ -0.46
SF3B2-201ENST00000322535 PACS2Q86VP3 889 aa12.2□□□□□ -0.46
SF3B2-201ENST00000322535 TRPM3Q9HCF6 1732 aaPredicted RBP12.19□□□□□ -0.46
SF3B2-201ENST00000322535 PXDNQ92626 1479 aa12.19□□□□□ -0.46
SF3B2-201ENST00000322535 POLR3GO15318 223 aaPredicted RBP12.19□□□□□ -0.46
SF3B2-201ENST00000322535 REC8O95072 547 aa12.19□□□□□ -0.46
SF3B2-201ENST00000322535 MBD3O95983 291 aa12.19□□□□□ -0.46
SF3B2-201ENST00000322535 EIF2S2P20042 333 aaKnown RBP12.19□□□□□ -0.46
SF3B2-201ENST00000322535 RBM5P52756 815 aaKnown RBP eCLIP12.19□□□□□ -0.46
SF3B2-201ENST00000322535 GSCP56915 257 aaPredicted RBP12.19□□□□□ -0.46
SF3B2-201ENST00000322535 KMT5BQ4FZB7 885 aa12.19□□□□□ -0.46
SF3B2-201ENST00000322535 NBPF5PQ86XG9 351 aaPredicted RBP12.19□□□□□ -0.46
SF3B2-201ENST00000322535 DZIP1LQ8IYY4 767 aaKnown RBP12.19□□□□□ -0.46
SF3B2-201ENST00000322535 C1orf115Q9H7X2 142 aa12.19□□□□□ -0.46
SF3B2-201ENST00000322535 DCCP43146 1447 aa12.19□□□□□ -0.46
SF3B2-201ENST00000322535 GOLGA6L6A8MZA4 724 aa12.19□□□□□ -0.46
SF3B2-201ENST00000322535 GADD45BO75293 160 aaPredicted RBP12.19□□□□□ -0.46
SF3B2-201ENST00000322535 ANXA1P04083 346 aa12.19□□□□□ -0.46
SF3B2-201ENST00000322535 SETQ01105 290 aaPredicted RBP12.19□□□□□ -0.46
SF3B2-201ENST00000322535 ZKSCAN2Q63HK3 967 aa12.19□□□□□ -0.46
SF3B2-201ENST00000322535 TMEM57Q8N5G2 664 aa12.19□□□□□ -0.46
SF3B2-201ENST00000322535 SOS2Q07890 1332 aaPredicted RBP12.19□□□□□ -0.46
SF3B2-201ENST00000322535 CHL1O00533 1208 aa12.18□□□□□ -0.46
SF3B2-201ENST00000322535 SMARCA5O60264 1052 aaPredicted RBP12.18□□□□□ -0.46
SF3B2-201ENST00000322535 EVA1CP58658 441 aa12.18□□□□□ -0.46
SF3B2-201ENST00000322535 LARP1Q6PKG0 1096 aaKnown RBP12.18□□□□□ -0.46
SF3B2-201ENST00000322535 DNAJC14Q6Y2X3 702 aaPredicted RBP12.18□□□□□ -0.46
SF3B2-201ENST00000322535 PIK3R5Q8WYR1 880 aa12.18□□□□□ -0.46
SF3B2-201ENST00000322535 RAPGEF4Q8WZA2 1011 aa12.18□□□□□ -0.46
SF3B2-201ENST00000322535 IL16Q14005 1332 aa12.18□□□□□ -0.46
SF3B2-201ENST00000322535 PRAMEF22A3QJZ6 481 aa12.18□□□□□ -0.46
SF3B2-201ENST00000322535 PPP1R12AO14974 1030 aaPredicted RBP12.18□□□□□ -0.46
SF3B2-201ENST00000322535 INHBEP58166 350 aa12.18□□□□□ -0.46
SF3B2-201ENST00000322535 SLC39A6Q13433 755 aa12.18□□□□□ -0.46
SF3B2-201ENST00000322535 ZC3H12AQ5D1E8 599 aaKnown RBP12.18□□□□□ -0.46
SF3B2-201ENST00000322535 KRBA2Q6ZNG9 492 aa12.18□□□□□ -0.46
SF3B2-201ENST00000322535 SYAP1Q96A49 352 aaPredicted RBP12.18□□□□□ -0.46
SF3B2-201ENST00000322535 KAT6BQ8WYB5 2073 aa12.18□□□□□ -0.46
SF3B2-201ENST00000322535 EP400Q96L91 3159 aa12.18□□□□□ -0.46
SF3B2-201ENST00000322535 CYP2E1P05181 493 aaPredicted RBP12.17□□□□□ -0.46
SF3B2-201ENST00000322535 SSR1P43307 286 aaKnown RBP12.17□□□□□ -0.46
SF3B2-201ENST00000322535 TMEM132AQ24JP5 1023 aa12.17□□□□□ -0.46
SF3B2-201ENST00000322535 FAM53CQ9NYF3 392 aa12.17□□□□□ -0.46
SF3B2-201ENST00000322535 RGPD1P0DJD0 1748 aa12.17□□□□□ -0.46
SF3B2-201ENST00000322535 C1orf141Q5JVX7 400 aa12.17□□□□□ -0.46
SF3B2-201ENST00000322535 G2E3Q7L622 706 aa12.17□□□□□ -0.46
SF3B2-201ENST00000322535 DRC7Q8IY82 874 aa12.17□□□□□ -0.46
SF3B2-201ENST00000322535 DDX54Q8TDD1 881 aaKnown RBP12.17□□□□□ -0.46
SF3B2-201ENST00000322535 F6X3S4 739 aa12.17□□□□□ -0.46
SF3B2-201ENST00000322535 SLC4A2P04920 1241 aa12.17□□□□□ -0.46
SF3B2-201ENST00000322535 PTGS1P23219 599 aa12.17□□□□□ -0.46
SF3B2-201ENST00000322535 RBM6P78332 1123 aaKnown RBP12.17□□□□□ -0.46
SF3B2-201ENST00000322535 MAP9Q49MG5 647 aa12.17□□□□□ -0.46
SF3B2-201ENST00000322535 ATF7IPQ6VMQ6 1270 aa12.17□□□□□ -0.46
SF3B2-201ENST00000322535 CCDC91Q7Z6B0 441 aa12.17□□□□□ -0.46
SF3B2-201ENST00000322535 RPAINQ86UA6 219 aa12.17□□□□□ -0.46
SF3B2-201ENST00000322535 MNS1Q8NEH6 495 aa12.17□□□□□ -0.46
SF3B2-201ENST00000322535 BTG4Q9NY30 223 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms