RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 CCDC50Q8IVM0 306 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 ZNF547Q8IVP9 402 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 CDKL3Q8IVW4 592 aaPredicted RBP3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 SYCE1Q8N0S2 351 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 FBXO39Q8N4B4 442 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 DDHD1Q8NEL9 900 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 ACTL9Q8TC94 416 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 SLC37A2Q8TED4 501 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 PTPMT1Q8WUK0 201 aaPredicted RBP3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 KCNE4Q8WWG9 221 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 PATE1Q8WXA2 126 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 SLC22A18Q96BI1 424 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 HAUS1Q96CS2 278 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 RSRC1Q96IZ7 334 aaKnown RBP3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 ZNF514Q96K75 400 aaPredicted RBP3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 SPATA13Q96N96 652 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 CDRT15Q96T59 188 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 BAG1Q99933 345 aaPredicted RBP3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 ABHD6Q9BV23 337 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 SPATA16Q9BXB7 569 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 FRMD8P1Q9BZ68 369 aaPredicted RBP3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 RAB33BQ9H082 229 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 GBA3Q9H227 469 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 GOLPH3Q9H4A6 298 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 ZNF696Q9H7X3 374 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 IL26Q9NPH9 171 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 FBXO8Q9NRD0 319 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 GIMAP4Q9NUV9 329 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 ADPRHL2Q9NX46 363 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 AKAP7Q9P0M2 348 aaPredicted RBP3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 KLHL8Q9P2G9 620 aaPredicted RBP3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 ATXN10Q9UBB4 475 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 EPHA6Q9UF33 1036 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 MOSPD1Q9UJG1 213 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 ERRFI1Q9UJM3 462 aaPredicted RBP3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 TMEM5Q9Y2B1 443 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 PCYT1BQ9Y5K3 369 aaPredicted RBP3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 SPIN1Q9Y657 262 aaPredicted RBP3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 NUP210LQ5VU65 1888 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 DOCK10Q96BY6 2186 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 MN1Q10571 1320 aaPredicted RBP3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 IGLV3-16A0A075B6K0 115 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 LOC102723996A0A087X1L8 192 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 TRBV5-4A0A0C4DH59 114 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 IGHV5-10-1A0A0J9YXX1 117 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 GLYATL1P3A0A0U1RQE8 302 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 C2orf81A6NN90 581 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 ERI2A8K979 691 aaKnown RBP3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 PRSS47A8MTI9 375 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 PRR32B1ATL7 298 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 H7C0C1 242 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 PLOD2O00469 737 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 PSMD3O43242 534 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 DUX1O43812 170 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 CDK14O94921 469 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 EML2O95834 649 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 AGTP01019 485 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 C9P02748 559 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 PIRTP0C851 137 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 PATE4P0C8F1 98 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 VPREB1P12018 145 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 LIFP15018 202 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 VCLP18206 1134 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 IDSP22304 550 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 ALDH4A1P30038 563 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 STIP1P31948 543 aaKnown RBP3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 SPAM1P38567 509 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 TNNT3P45378 269 aaPredicted RBP3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 ATP5OP48047 213 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 GSDMDP57764 484 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 OR1D5P58170 312 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 EIF3EP60228 445 aaKnown RBP3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 XIAPP98170 497 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 CCDC173Q0VFZ6 552 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 PNRC1Q12796 327 aaPredicted RBP3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 PRPSAP1Q14558 356 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 C16orf72Q14CZ0 275 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 TAF1AQ15573 450 aaPredicted RBP3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 PARP6Q2NL67 630 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 GPR33Q49SQ1 333 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 BCL7AQ4VC05 210 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 ANKRD20A2Q5SQ80 823 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 LDLRAP1Q5SW96 308 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 GRTP1Q5TC63 336 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 ANKRD20A1Q5TYW2 823 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 ANKRD20A3Q5VUR7 823 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 ADAM5Q6NVV9 412 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 DOK6Q6PKX4 331 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 FIGLAQ6QHK4 219 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 TMEM26Q6ZUK4 368 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 GLT6D1Q7Z4J2 308 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 KIAA1328Q86T90 577 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 LINC00346Q8IVM7 164 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 CPSF7Q8N684 471 aaKnown RBP3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 UBL4BQ8N7F7 174 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 BMPERQ8N8U9 685 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 Q8N9G6 341 aaPredicted RBP3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 MCUQ8NE86 351 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 CCDC112Q8NEF3 446 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 IPMKQ8NFU5 416 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms