RNA–Protein interactions for RNA: ENST00000463419.1

NIN-208, Transcript of ninein, human

TSL 4

Gene NIN, Length 1,317 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIN-208	ENST00000463419	IL18BP	O95998	194 aa		11.73	□□□□□ -0.53
NIN-208	ENST00000463419	HK1	P19367	917 aa		11.73	□□□□□ -0.53
NIN-208	ENST00000463419	SERPINB5	P36952	375 aa		11.73	□□□□□ -0.53
NIN-208	ENST00000463419	PEX19	P40855	299 aa		11.73	□□□□□ -0.53
NIN-208	ENST00000463419	ETV4	P43268	484 aa		11.73	□□□□□ -0.53
NIN-208	ENST00000463419	CLK3	P49761	638 aa	Known RBP	11.73	□□□□□ -0.53
NIN-208	ENST00000463419	TESK1	Q15569	626 aa		11.73	□□□□□ -0.53
NIN-208	ENST00000463419	BCL2A1	Q16548	175 aa		11.73	□□□□□ -0.53
NIN-208	ENST00000463419	GRAMD1B	Q3KR37	738 aa		11.73	□□□□□ -0.53
NIN-208	ENST00000463419	VPS26B	Q4G0F5	336 aa		11.73	□□□□□ -0.53
NIN-208	ENST00000463419	APOOL	Q6UXV4	268 aa		11.73	□□□□□ -0.53
NIN-208	ENST00000463419	SZRD1	Q7Z422	152 aa		11.73	□□□□□ -0.53
NIN-208	ENST00000463419	R3HCC1L	Q7Z5L2	792 aa	Known RBP	11.73	□□□□□ -0.53
NIN-208	ENST00000463419	ZNF511	Q8NB15	262 aa		11.73	□□□□□ -0.53
NIN-208	ENST00000463419	SLC16A11	Q8NCK7	471 aa		11.73	□□□□□ -0.53
NIN-208	ENST00000463419	OR7A2P	Q8NGA2	310 aa		11.73	□□□□□ -0.53
NIN-208	ENST00000463419	CEP70	Q8NHQ1	597 aa		11.73	□□□□□ -0.53
NIN-208	ENST00000463419	FBXO30	Q8TB52	745 aa		11.73	□□□□□ -0.53
NIN-208	ENST00000463419	SLC9A6	Q92581	669 aa		11.73	□□□□□ -0.53
NIN-208	ENST00000463419	NRGN	Q92686	78 aa		11.73	□□□□□ -0.53
NIN-208	ENST00000463419	LRRC46	Q96FV0	321 aa		11.73	□□□□□ -0.53
NIN-208	ENST00000463419	TM9SF2	Q99805	663 aa		11.73	□□□□□ -0.53
NIN-208	ENST00000463419	C1orf50	Q9BV19	199 aa		11.73	□□□□□ -0.53
NIN-208	ENST00000463419	ATP6V1H	Q9UI12	483 aa		11.73	□□□□□ -0.53
NIN-208	ENST00000463419	FOXD3	Q9UJU5	478 aa	Predicted RBP	11.73	□□□□□ -0.53
NIN-208	ENST00000463419	PKDREJ	Q9NTG1	2253 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	CELSR1	Q9NYQ6	3014 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	TMEM114	B3SHH9	223 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	SCAMP2	O15127	329 aa	Known RBP	11.72	□□□□□ -0.53
NIN-208	ENST00000463419	EMC8	O43402	210 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	HCRTR2	O43614	444 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	SKAP2	O75563	359 aa	Predicted RBP	11.72	□□□□□ -0.53
NIN-208	ENST00000463419	ANGPTL1	O95841	491 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	TGM6	O95932	706 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	ACP2	P11117	423 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	MAPK1	P28482	360 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	CLDN15	P56746	228 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	PRR5	P85299	388 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	GANAB	Q14697	944 aa	Known RBP	11.72	□□□□□ -0.53
NIN-208	ENST00000463419	PTGR1	Q14914	329 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	MLC1	Q15049	377 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	FLYWCH1	Q4VC44	716 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	C6orf136	Q5SQH8	315 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	RAET1L	Q5VY80	246 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	MFSD12	Q6NUT3	480 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	LRIG3	Q6UXM1	1119 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	GRAMD2A	Q8IUY3	354 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	UBQLNL	Q8IYU4	475 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	GCNT2	Q8N0V5	402 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	MREG	Q8N565	214 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	OR5M1	Q8NGP8	315 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	OR4C3	Q8NH37	302 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	FAM110B	Q8TC76	370 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	NUDT8	Q8WV74	236 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	INTS12	Q96CB8	462 aa	Known RBP	11.72	□□□□□ -0.53
NIN-208	ENST00000463419	C1GALT1C1	Q96EU7	318 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	OTUB1	Q96FW1	271 aa	Predicted RBP	11.72	□□□□□ -0.53
NIN-208	ENST00000463419	C16orf58	Q96GQ5	468 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	ZFP3	Q96NJ6	502 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	MS4A4E	Q96PG1	132 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	GPATCH1	Q9BRR8	931 aa	Known RBP	11.72	□□□□□ -0.53
NIN-208	ENST00000463419	YIPF4	Q9BSR8	244 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	SFXN3	Q9BWM7	321 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	PARD6B	Q9BYG5	372 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	TBL1XR1	Q9BZK7	514 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	PTGES2	Q9H7Z7	377 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	SIRT3	Q9NTG7	399 aa	Predicted RBP	11.72	□□□□□ -0.53
NIN-208	ENST00000463419	DNAJB12	Q9NXW2	375 aa	Known RBP	11.72	□□□□□ -0.53
NIN-208	ENST00000463419	ZNF337	Q9Y3M9	751 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	POLQ	O75417	2590 aa		11.72	□□□□□ -0.53
NIN-208	ENST00000463419	IGLV3-32	A0A0A0MS00	114 aa		11.71	□□□□□ -0.53
NIN-208	ENST00000463419		A0A1W2PRB8	838 aa		11.71	□□□□□ -0.53
NIN-208	ENST00000463419	OR2M5	A3KFT3	312 aa		11.71	□□□□□ -0.53
NIN-208	ENST00000463419	FAM221A	A4D161	298 aa		11.71	□□□□□ -0.53
NIN-208	ENST00000463419		H0YC42	278 aa		11.71	□□□□□ -0.53
NIN-208	ENST00000463419	GMFG	O60234	142 aa		11.71	□□□□□ -0.53
NIN-208	ENST00000463419	LYPLA1	O75608	230 aa	Predicted RBP	11.71	□□□□□ -0.53
NIN-208	ENST00000463419	KCNK2	O95069	426 aa		11.71	□□□□□ -0.53
NIN-208	ENST00000463419	OXSR1	O95747	527 aa	Predicted RBP	11.71	□□□□□ -0.53
NIN-208	ENST00000463419	LAMP1	P11279	417 aa		11.71	□□□□□ -0.53
NIN-208	ENST00000463419	PEPD	P12955	493 aa		11.71	□□□□□ -0.53
NIN-208	ENST00000463419	HPCAL1	P37235	193 aa		11.71	□□□□□ -0.53
NIN-208	ENST00000463419	SUCLG1	P53597	346 aa	Known RBP	11.71	□□□□□ -0.53
NIN-208	ENST00000463419	TPD52	P55327	224 aa	Predicted RBP	11.71	□□□□□ -0.53
NIN-208	ENST00000463419	ZNF844	Q08AG5	666 aa		11.71	□□□□□ -0.53
NIN-208	ENST00000463419	C17orf67	Q0P5P2	114 aa		11.71	□□□□□ -0.53
NIN-208	ENST00000463419	DUSP5	Q16690	384 aa		11.71	□□□□□ -0.53
NIN-208	ENST00000463419	KRT71	Q3SY84	523 aa		11.71	□□□□□ -0.53
NIN-208	ENST00000463419	ATP6AP1L	Q52LC2	224 aa		11.71	□□□□□ -0.53
NIN-208	ENST00000463419	FIGNL1	Q6PIW4	674 aa		11.71	□□□□□ -0.53
NIN-208	ENST00000463419	ZAR1	Q86SH2	424 aa		11.71	□□□□□ -0.53
NIN-208	ENST00000463419	LUZP2	Q86TE4	346 aa		11.71	□□□□□ -0.53
NIN-208	ENST00000463419	NUDCD3	Q8IVD9	361 aa		11.71	□□□□□ -0.53
NIN-208	ENST00000463419	FNDC5	Q8NAU1	212 aa		11.71	□□□□□ -0.53
NIN-208	ENST00000463419	FAM222B	Q8WU58	562 aa		11.71	□□□□□ -0.53
NIN-208	ENST00000463419	FAM120B	Q96EK7	910 aa	Known RBP	11.71	□□□□□ -0.53
NIN-208	ENST00000463419	PKNOX2	Q96KN3	472 aa		11.71	□□□□□ -0.53
NIN-208	ENST00000463419	POLDIP3	Q9BY77	421 aa	Known RBP	11.71	□□□□□ -0.53
NIN-208	ENST00000463419	RASSF1	Q9NS23	344 aa		11.71	□□□□□ -0.53
NIN-208	ENST00000463419	FBXO34	Q9NWN3	711 aa		11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms