RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 OR5T3Q8NGG3 340 aa5.36□□□□□ -1.55
SCAF11-213ENST00000550629 OR2Y1Q8NGV0 311 aa5.36□□□□□ -1.55
SCAF11-213ENST00000550629 STT3BQ8TCJ2 826 aa5.36□□□□□ -1.55
SCAF11-213ENST00000550629 C16orf78Q8WTQ4 265 aa5.36□□□□□ -1.55
SCAF11-213ENST00000550629 CT55Q8WUE5 264 aa5.36□□□□□ -1.55
SCAF11-213ENST00000550629 C10orf82Q8WW14 230 aa5.36□□□□□ -1.55
SCAF11-213ENST00000550629 FGF11Q92914 225 aa5.36□□□□□ -1.55
SCAF11-213ENST00000550629 MR1Q95460 341 aa5.36□□□□□ -1.55
SCAF11-213ENST00000550629 TESCQ96BS2 214 aa5.36□□□□□ -1.55
SCAF11-213ENST00000550629 TM4SF18Q96CE8 201 aa5.36□□□□□ -1.55
SCAF11-213ENST00000550629 VPS50Q96JG6 964 aa5.36□□□□□ -1.55
SCAF11-213ENST00000550629 PPP1R36Q96LQ0 422 aa5.36□□□□□ -1.55
SCAF11-213ENST00000550629 IP6K3Q96PC2 410 aa5.36□□□□□ -1.55
SCAF11-213ENST00000550629 PRPF18Q99633 342 aaKnown RBP5.36□□□□□ -1.55
SCAF11-213ENST00000550629 SMAD5Q99717 465 aaKnown RBP5.36□□□□□ -1.55
SCAF11-213ENST00000550629 MAPKAP1Q9BPZ7 522 aa5.36□□□□□ -1.55
SCAF11-213ENST00000550629 ELAC2Q9BQ52 826 aaKnown RBP5.36□□□□□ -1.55
SCAF11-213ENST00000550629 EBF4Q9BQW3 602 aa5.36□□□□□ -1.55
SCAF11-213ENST00000550629 PELOQ9BRX2 385 aaKnown RBP5.36□□□□□ -1.55
SCAF11-213ENST00000550629 SORBS1Q9BX66 1292 aaKnown RBP5.36□□□□□ -1.55
SCAF11-213ENST00000550629 CHST8Q9H2A9 424 aa5.36□□□□□ -1.55
SCAF11-213ENST00000550629 REEP4Q9H6H4 257 aa5.36□□□□□ -1.55
SCAF11-213ENST00000550629 RPF2Q9H7B2 306 aaKnown RBP5.36□□□□□ -1.55
SCAF11-213ENST00000550629 MIEF1Q9NQG6 463 aa5.36□□□□□ -1.55
SCAF11-213ENST00000550629 ATAD3AQ9NVI7 634 aa5.36□□□□□ -1.55
SCAF11-213ENST00000550629 TBCCD1Q9NVR7 557 aa5.36□□□□□ -1.55
SCAF11-213ENST00000550629 VSX1Q9NZR4 365 aaPredicted RBP5.36□□□□□ -1.55
SCAF11-213ENST00000550629 ZIM2Q9NZV7 527 aa5.36□□□□□ -1.55
SCAF11-213ENST00000550629 HCN3Q9P1Z3 774 aa5.36□□□□□ -1.55
SCAF11-213ENST00000550629 CTSFQ9UBX1 484 aa5.36□□□□□ -1.55
SCAF11-213ENST00000550629 ARL2BPQ9Y2Y0 163 aa5.36□□□□□ -1.55
SCAF11-213ENST00000550629 POLR3HQ9Y535 204 aaPredicted RBP5.36□□□□□ -1.55
SCAF11-213ENST00000550629 MAU2Q9Y6X3 613 aa5.36□□□□□ -1.55
SCAF11-213ENST00000550629 PTPRBP23467 1997 aa5.36□□□□□ -1.55
SCAF11-213ENST00000550629 HEATR5BQ9P2D3 2071 aa5.36□□□□□ -1.55
SCAF11-213ENST00000550629 SNRNP200O75643 2136 aaKnown RBP5.36□□□□□ -1.55
SCAF11-213ENST00000550629 SPEGQ15772 3267 aa5.36□□□□□ -1.55
SCAF11-213ENST00000550629 IGKV3D-11A0A0A0MRZ8 115 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 A0A0G2JN53 185 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 FAM234BA2RU67 622 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 TMEM8BA6NDV4 472 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 IDSB3KWA1 339 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 E9PBE3 544 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 SCAMP2O15127 329 aaKnown RBP5.35□□□□□ -1.55
SCAF11-213ENST00000550629 KLHL41O60662 606 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 SLC22A3O75751 556 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 KLF7O75840 302 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-213ENST00000550629 DCTN3O75935 186 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 GPR75O95800 540 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 GBAP04062 536 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 IL6P05231 212 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 CD1AP06126 327 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 IL3P08700 152 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 ALDOCP09972 364 aaKnown RBP5.35□□□□□ -1.55
SCAF11-213ENST00000550629 SLC35E2P0CK97 266 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 CSNK2A2P19784 350 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-213ENST00000550629 TCN2P20062 427 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 PTPN4P29074 926 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 FOLR3P41439 243 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 HNRNPH2P55795 449 aaKnown RBP5.35□□□□□ -1.55
SCAF11-213ENST00000550629 OLR1P78380 273 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 IGLV3-21P80748 117 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-213ENST00000550629 MAT1AQ00266 395 aaKnown RBP5.35□□□□□ -1.55
SCAF11-213ENST00000550629 RHAGQ02094 409 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 ACTN3Q08043 901 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-213ENST00000550629 C2orf80Q0P641 193 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 SLC13A2Q13183 592 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 DNASE1L3Q13609 305 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 SQLEQ14534 574 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 PTGR1Q14914 329 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 CEBPEQ15744 281 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 FAM219BQ5XKK7 198 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 TMEM198Q66K66 360 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-213ENST00000550629 MSANTD1Q6ZTZ1 278 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 METTL27Q8N6F8 245 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-213ENST00000550629 ENDOVQ8N8Q3 282 aaKnown RBP5.35□□□□□ -1.55
SCAF11-213ENST00000550629 ZNF248Q8NDW4 579 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 PLPP5Q8NEB5 264 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 OR4K14Q8NGD5 310 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 OR8J2Q8NGG1 315 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 DNAJB14Q8TBM8 379 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-213ENST00000550629 METTL21AQ8WXB1 218 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 PPCDCQ96CD2 204 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 COQ8BQ96D53 544 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 ERP27Q96DN0 273 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 ZBTB18Q99592 522 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 C1orf50Q9BV19 199 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 EBPLQ9BY08 206 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 FAM107BQ9H098 131 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 ACTL8Q9H568 366 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 ZNF385DQ9H6B1 395 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 CLMPQ9H6B4 373 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 GPN2Q9H9Y4 310 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-213ENST00000550629 ACSS1Q9NUB1 689 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-213ENST00000550629 GIMAP4Q9NUV9 329 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 TEX10Q9NXF1 929 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-213ENST00000550629 C19orf25Q9UFG5 118 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-213ENST00000550629 GIMAP2Q9UG22 337 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms