RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 PRSS48Q7RTY5 328 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 ASPGQ86U10 573 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 HOOK3Q86VS8 718 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 CALHM3Q86XJ0 350 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 MCOLN2Q8IZK6 566 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 CLYBLQ8N0X4 340 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 SIDT2Q8NBJ9 832 aaKnown RBP1.1□□□□□ -2.23
CCDC93-209ENST00000488908 ZNF596Q8TC21 504 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 RDH5Q92781 318 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 HAS2Q92819 552 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 GLYATL1Q969I3 302 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 CFAP36Q96G28 342 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 RPGRIP1Q96KN7 1286 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 SPATA17Q96L03 361 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 PANX3Q96QZ0 392 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 UTP14AQ9BVJ6 771 aaKnown RBP1.1□□□□□ -2.23
CCDC93-209ENST00000488908 RNPEPL1Q9HAU8 725 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 APMAPQ9HDC9 416 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 ESM1Q9NQ30 184 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 EXOSC3Q9NQT5 275 aaKnown RBP1.1□□□□□ -2.23
CCDC93-209ENST00000488908 ACOXLQ9NUZ1 547 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 VPS54Q9P1Q0 977 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 TRMT6Q9UJA5 497 aaKnown RBP1.1□□□□□ -2.23
CCDC93-209ENST00000488908 DIMT1Q9UNQ2 313 aaKnown RBP1.1□□□□□ -2.23
CCDC93-209ENST00000488908 SMC3Q9UQE7 1217 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 TRBV7-9A0A0J9YWB2 115 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 SH3PXD2BA1X283 911 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 A6NDX4 124 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 H0YIG0 161 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 IMPA2O14732 288 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 SH2D1BO14796 132 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 ARPC1BO15143 372 aaKnown RBP1.09□□□□□ -2.23
CCDC93-209ENST00000488908 TTI1O43156 1089 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 LYPLA1O75608 230 aaPredicted RBP1.09□□□□□ -2.23
CCDC93-209ENST00000488908 SUPT7LO94864 414 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 TIMP1P01033 207 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 MMP1P03956 469 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 IGHV4-34P06331 123 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 SFTPBP07988 381 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 BDNFP23560 247 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 CCNCP24863 283 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 ACVR1BP36896 505 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 ACADSBP45954 432 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 KCNJ1P48048 391 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 TKTL1P51854 596 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 ZNF85Q03923 595 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 FUT7Q11130 342 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 BNIP1Q12981 228 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 SMC1AQ14683 1233 aaKnown RBP1.09□□□□□ -2.23
CCDC93-209ENST00000488908 HKDC1Q2TB90 917 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 KBTBD12Q3ZCT8 623 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 ANKRD20A4Q4UJ75 823 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 ANKRD20A8PQ5CZ79 823 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 CCDC158Q5M9N0 1113 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 ANKRD20A2Q5SQ80 823 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 LGSNQ5TDP6 509 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 ANKRD20A1Q5TYW2 823 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 ANKRD20A3Q5VUR7 823 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 CDC42EP5Q6NZY7 148 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 ATRAIDQ6UW56 229 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 CWC27Q6UX04 472 aaKnown RBP1.09□□□□□ -2.23
CCDC93-209ENST00000488908 CLEC4GQ6UXB4 293 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 TSEN54Q7Z6J9 526 aaKnown RBP1.09□□□□□ -2.23
CCDC93-209ENST00000488908 GLRX5Q86SX6 157 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 CCDC83Q8IWF9 413 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 ZNF100Q8IYN0 542 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 Q8N9W7 124 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 OR4L1Q8NH43 312 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 FNDC8Q8TC99 324 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 UBTD2Q8WUN7 234 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 CXorf58Q96LI9 332 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 ZNF2Q9BSG1 426 aaPredicted RBP1.09□□□□□ -2.23
CCDC93-209ENST00000488908 FUNDC2Q9BWH2 189 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 TSPY26PQ9H489 355 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 MAGEF1Q9HAY2 307 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 NRN1Q9NPD7 142 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 MMP26Q9NRE1 261 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 SEPT10Q9P0V9 454 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 ERVK-18Q9QC07 812 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 NRBP1Q9UHY1 535 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 NAP1L2Q9ULW6 460 aaPredicted RBP1.09□□□□□ -2.23
CCDC93-209ENST00000488908 WIF1Q9Y5W5 379 aa1.09□□□□□ -2.23
CCDC93-209ENST00000488908 SYNJ2O15056 1496 aa1.09□□□□□ -2.24
CCDC93-209ENST00000488908 PLEKHG1Q9ULL1 1385 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 IGLV2-18A0A075B6J9 118 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 MACROD2A1Z1Q3 448 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 ZSCAN5BA6NJL1 495 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 TRAF3IP2O43734 574 aaPredicted RBP1.08□□□□□ -2.24
CCDC93-209ENST00000488908 HSPA4LO95757 839 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 OAS1P00973 400 aaKnown RBP1.08□□□□□ -2.24
CCDC93-209ENST00000488908 SEMG1P04279 462 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 CHRNGP07510 517 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 APRTP07741 180 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 HOXB7P09629 217 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 NUDT17P0C025 328 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 RNASE2P10153 161 aaKnown RBP1.08□□□□□ -2.24
CCDC93-209ENST00000488908 FCARP24071 287 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 CD1BP29016 333 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 NF2P35240 595 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 CTRLP40313 264 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms