RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 CDK9P50750 372 aaKnown RBP18.56■□□□□ 0.56
GTF3A-202ENST00000419181 RPL14P50914 215 aaKnown RBP18.56■□□□□ 0.56
GTF3A-202ENST00000419181 SLC18A1P54219 525 aa18.56■□□□□ 0.56
GTF3A-202ENST00000419181 MANFP55145 182 aaKnown RBP18.56■□□□□ 0.56
GTF3A-202ENST00000419181 WDR4P57081 412 aaKnown RBP18.56■□□□□ 0.56
GTF3A-202ENST00000419181 CDSNQ15517 529 aa18.56■□□□□ 0.56
GTF3A-202ENST00000419181 PDCD2Q16342 344 aaPredicted RBP18.56■□□□□ 0.56
GTF3A-202ENST00000419181 CYP27C1Q4G0S4 372 aa18.56■□□□□ 0.56
GTF3A-202ENST00000419181 HHATQ5VTY9 493 aa18.56■□□□□ 0.56
GTF3A-202ENST00000419181 ANGPTL8Q6UXH0 198 aa18.56■□□□□ 0.56
GTF3A-202ENST00000419181 RPRMLQ8N4K4 120 aa18.56■□□□□ 0.56
GTF3A-202ENST00000419181 ANKRD42Q8N9B4 389 aa18.56■□□□□ 0.56
GTF3A-202ENST00000419181 OR5M9Q8NGP3 310 aa18.56■□□□□ 0.56
GTF3A-202ENST00000419181 OR1J4Q8NGS1 313 aa18.56■□□□□ 0.56
GTF3A-202ENST00000419181 EFHD2Q96C19 240 aaPredicted RBP18.56■□□□□ 0.56
GTF3A-202ENST00000419181 TLCD1Q96CP7 247 aa18.56■□□□□ 0.56
GTF3A-202ENST00000419181 TMBIM4Q9HC24 238 aa18.56■□□□□ 0.56
GTF3A-202ENST00000419181 NTMQ9P121 344 aa18.56■□□□□ 0.56
GTF3A-202ENST00000419181 ACAD8Q9UKU7 415 aa18.56■□□□□ 0.56
GTF3A-202ENST00000419181 FIGNL2A6NMB9 653 aa18.55■□□□□ 0.56
GTF3A-202ENST00000419181 PRSS44E7EML9 344 aa18.55■□□□□ 0.56
GTF3A-202ENST00000419181 GNB5O14775 395 aa18.55■□□□□ 0.56
GTF3A-202ENST00000419181 DDX5P17844 614 aaKnown RBP18.55■□□□□ 0.56
GTF3A-202ENST00000419181 TRPC1P48995 793 aa18.55■□□□□ 0.56
GTF3A-202ENST00000419181 MAGOHP61326 146 aaKnown RBP18.55■□□□□ 0.56
GTF3A-202ENST00000419181 EMX2Q04743 252 aa18.55■□□□□ 0.56
GTF3A-202ENST00000419181 BST1Q10588 318 aa18.55■□□□□ 0.56
GTF3A-202ENST00000419181 MAD2L1Q13257 205 aaPredicted RBP18.55■□□□□ 0.56
GTF3A-202ENST00000419181 STX3Q13277 289 aa18.55■□□□□ 0.56
GTF3A-202ENST00000419181 ZNHIT3Q15649 155 aaPredicted RBP18.55■□□□□ 0.56
GTF3A-202ENST00000419181 SMU1Q2TAY7 513 aa18.55■□□□□ 0.56
GTF3A-202ENST00000419181 TMEM211Q6ICI0 200 aa18.55■□□□□ 0.56
GTF3A-202ENST00000419181 WDR53Q7Z5U6 358 aaPredicted RBP18.55■□□□□ 0.56
GTF3A-202ENST00000419181 KIRREL3Q8IZU9 778 aa18.55■□□□□ 0.56
GTF3A-202ENST00000419181 OR7A2PQ8NGA2 310 aa18.55■□□□□ 0.56
GTF3A-202ENST00000419181 HOXB13Q92826 284 aaPredicted RBP18.55■□□□□ 0.56
GTF3A-202ENST00000419181 PAIP2Q9BPZ3 127 aaKnown RBP18.55■□□□□ 0.56
GTF3A-202ENST00000419181 Q9N2J8 555 aa18.55■□□□□ 0.56
GTF3A-202ENST00000419181 ASIC5Q9NY37 505 aa18.55■□□□□ 0.56
GTF3A-202ENST00000419181 CBLCQ9ULV8 474 aa18.55■□□□□ 0.56
GTF3A-202ENST00000419181 ITPR2Q14571 2701 aa18.54■□□□□ 0.56
GTF3A-202ENST00000419181 NOTCH2Q04721 2471 aa18.54■□□□□ 0.56
GTF3A-202ENST00000419181 C2orf72A6NCS6 295 aa18.54■□□□□ 0.56
GTF3A-202ENST00000419181 TTC36A6NLP5 189 aa18.54■□□□□ 0.56
GTF3A-202ENST00000419181 TRAPPC6AO75865 159 aa18.54■□□□□ 0.56
GTF3A-202ENST00000419181 LAMP1P11279 417 aa18.54■□□□□ 0.56
GTF3A-202ENST00000419181 EFNA1P20827 205 aaPredicted RBP18.54■□□□□ 0.56
GTF3A-202ENST00000419181 ACVR2AP27037 513 aa18.54■□□□□ 0.56
GTF3A-202ENST00000419181 MAP3K8P41279 467 aa18.54■□□□□ 0.56
GTF3A-202ENST00000419181 MRPS22P82650 360 aaKnown RBP18.54■□□□□ 0.56
GTF3A-202ENST00000419181 GAB1Q13480 694 aa18.54■□□□□ 0.56
GTF3A-202ENST00000419181 CASP8Q14790 479 aa18.54■□□□□ 0.56
GTF3A-202ENST00000419181 MLC1Q15049 377 aa18.54■□□□□ 0.56
GTF3A-202ENST00000419181 WLSQ5T9L3 541 aa18.54■□□□□ 0.56
GTF3A-202ENST00000419181 ZNF585AQ6P3V2 769 aa18.54■□□□□ 0.56
GTF3A-202ENST00000419181 RIMKLAQ8IXN7 391 aa18.54■□□□□ 0.56
GTF3A-202ENST00000419181 KRTCAP2Q8N6L1 136 aa18.54■□□□□ 0.56
GTF3A-202ENST00000419181 WDSUB1Q8N9V3 476 aa18.54■□□□□ 0.56
GTF3A-202ENST00000419181 PPP1R36Q96LQ0 422 aa18.54■□□□□ 0.56
GTF3A-202ENST00000419181 AKTIPQ9H8T0 292 aa18.54■□□□□ 0.56
GTF3A-202ENST00000419181 EQTNQ9NQ60 294 aa18.54■□□□□ 0.56
GTF3A-202ENST00000419181 NOP53Q9NZM5 478 aaKnown RBP18.54■□□□□ 0.56
GTF3A-202ENST00000419181 EIF3LQ9Y262 564 aaKnown RBP18.54■□□□□ 0.56
GTF3A-202ENST00000419181 FAM215AQ9Y5M1 114 aa18.54■□□□□ 0.56
GTF3A-202ENST00000419181 WIF1Q9Y5W5 379 aa18.54■□□□□ 0.56
GTF3A-202ENST00000419181 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.53■□□□□ 0.56
GTF3A-202ENST00000419181 WDR1O75083 606 aa18.53■□□□□ 0.56
GTF3A-202ENST00000419181 CLDN14O95500 239 aa18.53■□□□□ 0.56
GTF3A-202ENST00000419181 G6PDP11413 515 aa18.53■□□□□ 0.56
GTF3A-202ENST00000419181 CYP4B1P13584 511 aa18.53■□□□□ 0.56
GTF3A-202ENST00000419181 PRPS1L1P21108 318 aa18.53■□□□□ 0.56
GTF3A-202ENST00000419181 HTR1EP28566 365 aa18.53■□□□□ 0.56
GTF3A-202ENST00000419181 GRNP28799 593 aaKnown RBP18.53■□□□□ 0.56
GTF3A-202ENST00000419181 C21orf58P58505 322 aa18.53■□□□□ 0.56
GTF3A-202ENST00000419181 DECR1Q16698 335 aa18.53■□□□□ 0.56
GTF3A-202ENST00000419181 ZNF630Q2M218 657 aaPredicted RBP18.53■□□□□ 0.56
GTF3A-202ENST00000419181 RTL6Q6ICC9 239 aa18.53■□□□□ 0.56
GTF3A-202ENST00000419181 NUP43Q8NFH3 380 aa18.53■□□□□ 0.56
GTF3A-202ENST00000419181 CEP70Q8NHQ1 597 aa18.53■□□□□ 0.56
GTF3A-202ENST00000419181 NUDT8Q8WV74 236 aa18.53■□□□□ 0.56
GTF3A-202ENST00000419181 COQ8BQ96D53 544 aa18.53■□□□□ 0.56
GTF3A-202ENST00000419181 GIMAP5Q96F15 307 aa18.53■□□□□ 0.56
GTF3A-202ENST00000419181 MS4A4EQ96PG1 132 aa18.53■□□□□ 0.56
GTF3A-202ENST00000419181 SERHLQ9NQF3 203 aa18.53■□□□□ 0.56
GTF3A-202ENST00000419181 SIRT3Q9NTG7 399 aaPredicted RBP18.53■□□□□ 0.56
GTF3A-202ENST00000419181 ATAD3AQ9NVI7 634 aa18.53■□□□□ 0.56
GTF3A-202ENST00000419181 MAPRE3Q9UPY8 281 aa18.53■□□□□ 0.56
GTF3A-202ENST00000419181 PCDHGB3Q9Y5G1 929 aa18.53■□□□□ 0.56
GTF3A-202ENST00000419181 C15orf38-AP3S2A0A0A6YYH1 394 aa18.52■□□□□ 0.56
GTF3A-202ENST00000419181 CBR3O75828 277 aa18.52■□□□□ 0.56
GTF3A-202ENST00000419181 GAS1P54826 345 aa18.52■□□□□ 0.56
GTF3A-202ENST00000419181 CRYZQ08257 329 aaKnown RBP18.52■□□□□ 0.56
GTF3A-202ENST00000419181 EIPR1Q53HC9 387 aa18.52■□□□□ 0.56
GTF3A-202ENST00000419181 CPTPQ5TA50 214 aa18.52■□□□□ 0.56
GTF3A-202ENST00000419181 SP5Q6BEB4 398 aaPredicted RBP18.52■□□□□ 0.56
GTF3A-202ENST00000419181 B3GNT6Q6ZMB0 384 aa18.52■□□□□ 0.56
GTF3A-202ENST00000419181 NATD1Q8N6N6 113 aa18.52■□□□□ 0.56
GTF3A-202ENST00000419181 CDRT4Q8N9R6 151 aa18.52■□□□□ 0.56
GTF3A-202ENST00000419181 FAM83FQ8NEG4 500 aaPredicted RBP18.52■□□□□ 0.56
GTF3A-202ENST00000419181 MGARPQ8TDB4 240 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms