RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 AQP2P41181 271 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 OGDHQ02218 1023 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 CYBRD1Q53TN4 286 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 BRICD5Q6PL45 260 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 CMTM2Q8TAZ6 248 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 REEP4Q9H6H4 257 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 TESQ9UGI8 421 aaKnown RBP11.5□□□□□ -0.57
PCF11-201ENST00000298281 C20orf202A1L168 122 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 OR51F1A6NGY5 319 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 LGALS8O00214 317 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 HSPB6O14558 160 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 MMP20O60882 483 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 VNN1O95497 513 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 CSTAP01040 98 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 SERPINE2P07093 398 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 GALTP07902 379 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 LPCAT3Q6P1A2 487 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 ERMP1Q7Z2K6 904 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 TICAM1Q8IUC6 712 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 ZNF420Q8TAQ5 688 aaPredicted RBP11.49□□□□□ -0.57
PCF11-201ENST00000298281 CLEC4CQ8WTT0 213 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 HSH2DQ96JZ2 352 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 HCAR1Q9BXC0 346 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 WNT7AO00755 349 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 AK1P00568 194 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 CKMT2P17540 419 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 ZNF280AP59817 542 aaPredicted RBP11.49□□□□□ -0.57
PCF11-201ENST00000298281 RPS21P63220 83 aaKnown RBP11.49□□□□□ -0.57
PCF11-201ENST00000298281 CCNJQ5T5M9 372 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 GPRC6AQ5T6X5 926 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 TUSC5Q8IXB3 177 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 FOXRED1Q96CU9 486 aaPredicted RBP11.49□□□□□ -0.57
PCF11-201ENST00000298281 RBMXL1Q96E39 390 aaKnown RBP11.49□□□□□ -0.57
PCF11-201ENST00000298281 POTEKPQ9BYX7 375 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 SRA1Q9HD15 236 aaKnown RBP11.49□□□□□ -0.57
PCF11-201ENST00000298281 OR14J1Q9UGF5 321 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 TEX264Q9Y6I9 313 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 TBX18O95935 607 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 OPN1SWP03999 348 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 GNB1P62873 340 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 POU4F2Q12837 409 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 NKPD1Q17RQ9 610 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 UNC5DQ6UXZ4 953 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 ZNF440Q8IYI8 595 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 DAZLQ92904 295 aaKnown RBP11.49□□□□□ -0.57
PCF11-201ENST00000298281 UPRTQ96BW1 309 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 RXFP3Q9NSD7 469 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 TRBV2A0A0J9YWF9 115 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 RAB27BO00194 218 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 DLX3O60479 287 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 B3GALNT1O75752 331 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 DDCP20711 480 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 CLCN2P51788 898 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 RPS13P62277 151 aaKnown RBP11.49□□□□□ -0.57
PCF11-201ENST00000298281 EPGNQ6UW88 154 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 NRROSQ86YC3 692 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 ZNF566Q969W8 418 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 GKN1Q9NS71 199 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 MYOTQ9UBF9 498 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 CRTAPO75718 401 aaPredicted RBP11.49□□□□□ -0.57
PCF11-201ENST00000298281 ZNF728P0DKX0 622 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 GPR143P51810 404 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 RPL23AP62750 156 aaKnown RBP11.49□□□□□ -0.57
PCF11-201ENST00000298281 PLCXD2Q0VAA5 305 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 OR8B8Q15620 311 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 UEVLDQ8IX04 471 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 CHTF18Q8WVB6 975 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 OR5P2Q8WZ92 322 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 EBF2Q9HAK2 575 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 DLGAP4Q9Y2H0 992 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 NFAT5O94916 1531 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 OR2J3O76001 311 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 AHSGP02765 367 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 GABRA4P48169 554 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 C14orf28Q4W4Y0 310 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 GPR155Q7Z3F1 870 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 SAMD12Q8N8I0 201 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 TERB2Q8NHR7 220 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 RPF2Q9H7B2 306 aaKnown RBP11.49□□□□□ -0.57
PCF11-201ENST00000298281 STUB1Q9UNE7 303 aa11.49□□□□□ -0.57
PCF11-201ENST00000298281 DOCK10Q96BY6 2186 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 OR5L1Q8NGL2 311 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 C1orf74Q96LT6 269 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 SIDT1Q9NXL6 827 aaKnown RBP11.48□□□□□ -0.57
PCF11-201ENST00000298281 SARDHQ9UL12 918 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 WTIPA6NIX2 430 aaPredicted RBP11.48□□□□□ -0.57
PCF11-201ENST00000298281 CD300LBA8K4G0 201 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 F5H5K5 113 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 H3BMQ9 156 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 TULP2O00295 520 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 F2P00734 622 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 DBHP09172 617 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 SUOXP51687 545 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 ARHGAP1Q07960 439 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 TGFBIQ15582 683 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 NAA40Q86UY6 237 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 ADAMTS18Q8TE60 1221 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 RNF128Q8TEB7 428 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 FKBP10Q96AY3 582 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 OR5B2Q96R09 309 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms