RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 SEM1Q6ZVN7 128 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 LRRC70Q7Z2Q7 622 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 MAATS1Q7Z4T9 603 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 GOLGA7Q7Z5G4 137 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 WDR53Q7Z5U6 358 aaPredicted RBP4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 STK32CQ86UX6 486 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 GPALPP1Q8IXQ4 340 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 ZZZ3Q8IYH5 903 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 PRR22Q8IZ63 422 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 CENPLQ8N0S6 344 aaPredicted RBP4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 MMP21Q8N119 569 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 ZCCHC7Q8N3Z6 543 aaKnown RBP4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 FAM109AQ8N4B1 249 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 SIMC1Q8NDZ2 872 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 HIPK4Q8NE63 616 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 TNIP2Q8NFZ5 429 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 OR52B6Q8NGF0 335 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 OR8K3Q8NH51 312 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 NUBPLQ8TB37 319 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 SLC22A8Q8TCC7 542 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 TANKQ92844 425 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 RIT1Q92963 219 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 UBE2E3Q969T4 207 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 ATP6V1E2Q96A05 226 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 SPACA9Q96E40 222 aaPredicted RBP4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 PHF21BQ96EK2 531 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 SGCZQ96LD1 299 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 GPR78Q96P69 363 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 GNRHR2Q96P88 292 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 ZNF559Q9BR84 538 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 LRRC1Q9BTT6 524 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 ROGDIQ9GZN7 287 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 VPS11Q9H270 941 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 EPB41L4BQ9H329 900 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 ZMAT4Q9H898 229 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 NOL11Q9H8H0 719 aaKnown RBP4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 ACTR8Q9H981 624 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 SH2D2AQ9NP31 389 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 DMRT3Q9NQL9 472 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 FARSBQ9NSD9 589 aaKnown RBP4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 MS4A12Q9NXJ0 267 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 NUDT4Q9NZJ9 180 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 CPSF2Q9P2I0 782 aaKnown RBP4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 RNF14Q9UBS8 474 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 SLC6A5Q9Y345 797 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 CHCHD2Q9Y6H1 151 aaPredicted RBP4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 SPACA6W5XKT8 324 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 FBN2P35556 2912 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 ACANP16112 2415 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 A0A087X1B8 175 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 A0A096LPK6 155 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 C15orf38-AP3S2A0A0A6YYH1 394 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 A0A1B0GTL3 188 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 C2orf92A0A1B0GVN3 265 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 LRRC3CA6NJW4 275 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 SYCE1LA8MT33 242 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 H0YIV9 168 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 OR7A17O14581 309 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 KLHL2O95198 593 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 ZWINTO95229 277 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 APOL3O95236 402 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 AIFM1O95831 613 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 ALDOAP04075 364 aaKnown RBP4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 CLEC2LP0C7M8 214 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 FAHP16930 419 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 S1PR1P21453 382 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 NT5EP21589 574 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 GDF1P27539 372 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 PIK3R1P27986 724 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 SERPINB3P29508 390 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 TLX1P31314 330 aaPredicted RBP4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 UQCRC1P31930 480 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 STX2P32856 288 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 THBS2P35442 1172 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 FEN1P39748 380 aaKnown RBP4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 BUD31P41223 144 aaPredicted RBP4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 PIK3CBP42338 1070 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 XKP51811 444 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 ALDH18A1P54886 795 aaKnown RBP4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 CDH13P55290 713 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 SLC37A1P57057 533 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 SESN3P58005 492 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 SRSF3P84103 164 aaKnown RBP4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 PLIN5Q00G26 463 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 DUSP8Q13202 625 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 ACAP2Q15057 778 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 EBPQ15125 230 aaKnown RBP4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 PCBP2Q15366 365 aaKnown RBP eCLIP4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 TOMM20Q15388 145 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 FAM83EQ2M2I3 478 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 HYAL4Q2M3T9 481 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 EIPR1Q53HC9 387 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 FNDC7Q5VTL7 733 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 LIPJQ5W064 366 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 CD276Q5ZPR3 534 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 TMEM198Q66K66 360 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 FAM111BQ6SJ93 734 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 ARSKQ6UWY0 536 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 PLXDC2Q6UX71 529 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 CD300LDQ6UXZ3 194 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms