RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 E9PAM4 449 aa3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 E9PMD0 336 aa3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 H3BTX0 84 aa3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 SGK494L7N484 410 aa3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 B3GALNT1O75752 331 aa3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 IGSF6O95976 241 aa3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 MELTFP08582 738 aa3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 ZCCHC18P0CG32 403 aa3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 PTPN6P29350 595 aa3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 PRDX2P32119 198 aa3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 BPIFB3P59826 476 aa3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 SPP2Q13103 211 aa3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 ZKSCAN8Q15776 578 aaPredicted RBP3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 C17orf58Q2M2W7 97 aa3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 TTC31Q49AM3 519 aaPredicted RBP3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 ACER2Q5QJU3 275 aa3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 FAM219BQ5XKK7 198 aa3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 REG3GQ6UW15 175 aa3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 PAQR9Q6ZVX9 377 aa3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 ERC1Q8IUD2 1116 aa3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 GIPC3Q8TF64 312 aa3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 PINX1Q96BK5 328 aaKnown RBP3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 RPAP3Q9H6T3 665 aaPredicted RBP3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 ROPN1Q9HAT0 212 aaPredicted RBP3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 ADGRL4Q9HBW9 690 aa3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 NGBQ9NPG2 151 aa3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 CENPMQ9NSP4 180 aa3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 GDAP2Q9NXN4 497 aa3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 ZNF581Q9P0T4 197 aa3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 RCOR3Q9P2K3 495 aaPredicted RBP3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 MFSD2BA6NFX1 497 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 ZNF487B1APH4 448 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 C11orf98E9PRG8 122 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 ADAM12O43184 909 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 LRRTM2O43300 516 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 GPRIN2O60269 458 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 NDUFA7O95182 113 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 HOXB7P09629 217 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 FAM200BP0CF97 657 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 RRASP10301 218 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 FOLR2P14207 255 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 GATA2P23769 480 aaPredicted RBP3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 KRTAP5-9P26371 169 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 MTTPP55157 894 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 HAND2P61296 217 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 NAAAQ02083 359 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 DPYSQ14117 519 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 EIF2B1Q14232 305 aaKnown RBP3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 CEBPEQ15744 281 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 KRT71Q3SY84 523 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 TCTEX1D4Q5JR98 221 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 LDLRAP1Q5SW96 308 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 BEND6Q5SZJ8 279 aaPredicted RBP3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 SPINK14Q6IE38 97 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 PRR5LQ6MZQ0 368 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 SYVN1Q86TM6 617 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 P2RY8Q86VZ1 359 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 ERICH1Q86X53 443 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 MINDY2Q8NBR6 621 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 OR4F17Q8NGA8 305 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 MRPL38Q96DV4 380 aaKnown RBP3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 FOXN4Q96NZ1 517 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 OR4F4Q96R69 305 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 CUTCQ9NTM9 273 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 ZNF446Q9NWS9 450 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 GPR83Q9NYM4 423 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 KLRF1Q9NZS2 232 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 GHRLQ9UBU3 117 aa3.61□□□□□ -1.83
SMNDC1-205ENST00000477763 IGHV3OR16-12A0A075B7B8 117 aa3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 KBTBD11O94819 623 aa3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 TRIM16O95361 564 aa3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 PRAMEF12O95522 483 aa3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 PTBP3O95758 552 aaKnown RBP3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 PIGRP01833 764 aa3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 CYP11B1P15538 503 aa3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 PTPN4P29074 926 aa3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 CAMLGP49069 296 aa3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 METAP1P53582 386 aa3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 HMGCS2P54868 508 aa3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 MRPS6P82932 125 aaKnown RBP3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 FUT7Q11130 342 aa3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 C12orf60Q5U649 245 aa3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 ISLR2Q6UXK2 745 aa3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 UNC5DQ6UXZ4 953 aa3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 NET1Q7Z628 596 aaPredicted RBP3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 CEACAM19Q7Z692 300 aa3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 SPEM1Q8N4L4 309 aa3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 CERS5Q8N5B7 392 aa3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 OR6T1Q8NGN1 323 aa3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 CCDC110Q8TBZ0 833 aa3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 AGAP11Q8TF27 550 aa3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 CRYGNQ8WXF5 182 aa3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 RAB3CQ96E17 227 aa3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 ZBED6CLQ96FA7 236 aaPredicted RBP3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 C9orf85Q96MD7 179 aa3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 CARD6Q9BX69 1037 aa3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 ZBP1Q9H171 429 aa3.6□□□□□ -1.83
SMNDC1-205ENST00000477763 RWDD1Q9H446 243 aaPredicted RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 346.7 ms