RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 PLA2G2EQ9NZK7 142 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 KLRF1Q9NZS2 232 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 RCOR1Q9UKL0 485 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 KMT2AQ03164 3969 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 SYNDIG1LA6NDD5 238 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 TMCO5BA8MYB1 307 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 C4orf51C9J302 202 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 ATP6V1G2-DDX39BF2Z307 99 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 H3BML4 177 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 H7C0S8 307 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 RGS14O43566 566 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 OR1F1O43749 312 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 ZIC3O60481 467 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 CTNSO60931 367 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 LDB3O75112 727 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 SYF2O95926 243 aaKnown RBP5.69□□□□□ -1.5
HDAC3-206ENST00000471968 RHOXF2BP0C7M4 288 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 IGLL1P15814 213 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 MSX2P35548 267 aaPredicted RBP5.69□□□□□ -1.5
HDAC3-206ENST00000471968 HSD17B2P37059 387 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 SSR1P43307 286 aaKnown RBP5.69□□□□□ -1.5
HDAC3-206ENST00000471968 EIF1AXP47813 144 aaKnown RBP5.69□□□□□ -1.5
HDAC3-206ENST00000471968 TMED10P49755 219 aaKnown RBP5.69□□□□□ -1.5
HDAC3-206ENST00000471968 RAB38P57729 211 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 BTN3A2P78410 334 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 EBPQ15125 230 aaKnown RBP5.69□□□□□ -1.5
HDAC3-206ENST00000471968 KLF17Q5JT82 389 aaPredicted RBP5.69□□□□□ -1.5
HDAC3-206ENST00000471968 NKAPLQ5M9Q1 402 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 DESI1Q6ICB0 168 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 SLC30A6Q6NXT4 461 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 TREML1Q86YW5 311 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 METTL25Q8N6Q8 603 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 KCTD6Q8NC69 237 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 OR52N5Q8NH56 324 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 RAPGEF5Q92565 580 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 DACT3Q96B18 629 aaPredicted RBP5.69□□□□□ -1.5
HDAC3-206ENST00000471968 KTI12Q96EK9 354 aaPredicted RBP5.69□□□□□ -1.5
HDAC3-206ENST00000471968 CCDC34Q96HJ3 373 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 CDKN2AIPNLQ96HQ2 116 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 CSF3RQ99062 836 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 ASCL2Q99929 193 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 ZNF670Q9BS34 389 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 C1QTNF6Q9BXI9 259 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 CHIAQ9BZP6 476 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 TSPY26PQ9H489 355 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 KLHL31Q9H511 634 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 ZNF665Q9H7R5 613 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 MARCH7Q9H992 704 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 SLC6A13Q9NSD5 602 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 FAM120CQ9NX05 1096 aaKnown RBP5.69□□□□□ -1.5
HDAC3-206ENST00000471968 SLC17A6Q9P2U8 582 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 HOOK1Q9UJC3 728 aaKnown RBP5.69□□□□□ -1.5
HDAC3-206ENST00000471968 ZNF337Q9Y3M9 751 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 MUC4Q99102 2169 aa5.69□□□□□ -1.5
HDAC3-206ENST00000471968 A0A0G2JN53 185 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 IQANK1A0A1B0GTG1 560 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 A0A1W2PR80 420 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 EFCAB8A8MWE9 144 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 B9A039 149 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 PIP5K1BO14986 540 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 CDH1P12830 882 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 TNNT1P13805 278 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 COX7A2P14406 83 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 ZNF17P17021 662 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 GGT1P19440 569 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 SAT1P21673 171 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 GATA3P23771 443 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 MSNP26038 577 aaKnown RBP5.68□□□□□ -1.5
HDAC3-206ENST00000471968 PTGDSP41222 190 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 RPS13P62277 151 aaKnown RBP5.68□□□□□ -1.5
HDAC3-206ENST00000471968 RAET1LQ5VY80 246 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 ZNF470Q6ECI4 717 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 OR5M10Q6IEU7 315 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 SSX8Q7RTT4 187 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 NUFIP2Q7Z417 695 aaKnown RBP5.68□□□□□ -1.5
HDAC3-206ENST00000471968 IRF2BP2Q7Z5L9 587 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 PLCZ1Q86YW0 608 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 LRRC56Q8IYG6 542 aaPredicted RBP5.68□□□□□ -1.5
HDAC3-206ENST00000471968 C11orf44Q8N8P7 122 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 TRIM58Q8NG06 486 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 OR5M1Q8NGP8 315 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 NT5CQ8TCD5 201 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 POP5Q969H6 163 aaKnown RBP5.68□□□□□ -1.5
HDAC3-206ENST00000471968 DTNBP1Q96EV8 351 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 FCRL5Q96RD9 977 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 NODALQ96S42 347 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 C19orf43Q9BQ61 176 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 SNX15Q9NRS6 342 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 GLRX2Q9NS18 164 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 SIRT3Q9NTG7 399 aaPredicted RBP5.68□□□□□ -1.5
HDAC3-206ENST00000471968 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.68□□□□□ -1.5
HDAC3-206ENST00000471968 NLE1Q9NVX2 485 aaPredicted RBP5.68□□□□□ -1.5
HDAC3-206ENST00000471968 GPRC5BQ9NZH0 403 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 KLHL8Q9P2G9 620 aaPredicted RBP5.68□□□□□ -1.5
HDAC3-206ENST00000471968 ICAM5Q9UMF0 924 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 TRAF6Q9Y4K3 522 aa5.68□□□□□ -1.5
HDAC3-206ENST00000471968 IGHV3OR16-10A0A075B7F0 116 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 C1orf226A1L170 272 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 URADA6NGE7 173 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 OR5H1A6NKK0 313 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms