RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 ZNF639Q9UID6 485 aa16.26■□□□□ 0.19
SHKBP1-227ENST00000602011 CES1P1Q9UKY3 287 aa16.26■□□□□ 0.19
SHKBP1-227ENST00000602011 SLC6A5Q9Y345 797 aa16.26■□□□□ 0.19
SHKBP1-227ENST00000602011 MRPS18CQ9Y3D5 142 aaKnown RBP16.26■□□□□ 0.19
SHKBP1-227ENST00000602011 HMX2A2RU54 273 aa16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 OR7A17O14581 309 aa16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 SNPHO15079 494 aa16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 TO15178 435 aa16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 RCBTB2O95199 551 aa16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 LRATO95237 230 aa16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 SIX3O95343 332 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 GBAP04062 536 aa16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 CT62P0C5K7 136 aa16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 PPICP45877 212 aa16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 NAGLUP54802 743 aa16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 IRF9Q00978 393 aa16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 PRICKLE4Q2TBC4 344 aa16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 TECRLQ5HYJ1 363 aa16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 ZDHHC24Q6UX98 284 aa16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 Q71RC1 249 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 TAOK1Q7L7X3 1001 aa16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 MILR1Q7Z6M3 343 aa16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 PTGR2Q8N8N7 351 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 GBP7Q8N8V2 638 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 FAM83FQ8NEG4 500 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 WNT2BQ93097 391 aa16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 NXF5Q9H1B4 397 aaKnown RBP16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 PIGMQ9H3S5 423 aa16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 DLL4Q9NR61 685 aa16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 BCAP29Q9UHQ4 241 aa16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 SNX6Q9UNH7 406 aa16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 ZNF780BQ9Y6R6 833 aa16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 ARHGAP21Q5T5U3 1957 aa16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 MPDZO75970 2070 aa16.25■□□□□ 0.19
SHKBP1-227ENST00000602011 GNB5O14775 395 aa16.24■□□□□ 0.19
SHKBP1-227ENST00000602011 CASKO14936 926 aa16.24■□□□□ 0.19
SHKBP1-227ENST00000602011 ICOSLGO75144 302 aa16.24■□□□□ 0.19
SHKBP1-227ENST00000602011 OTCP00480 354 aa16.24■□□□□ 0.19
SHKBP1-227ENST00000602011 ALDOAP04075 364 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-227ENST00000602011 TMIGD3P0DMS9 266 aaPredicted RBP16.24■□□□□ 0.19
SHKBP1-227ENST00000602011 CASQ1P31415 396 aa16.24■□□□□ 0.19
SHKBP1-227ENST00000602011 SERPINB9P50453 376 aa16.24■□□□□ 0.19
SHKBP1-227ENST00000602011 DIO3P55073 304 aa16.24■□□□□ 0.19
SHKBP1-227ENST00000602011 ADAM8P78325 824 aa16.24■□□□□ 0.19
SHKBP1-227ENST00000602011 DEFB113Q30KQ7 82 aa16.24■□□□□ 0.19
SHKBP1-227ENST00000602011 EIPR1Q53HC9 387 aa16.24■□□□□ 0.19
SHKBP1-227ENST00000602011 WIPI1Q5MNZ9 446 aaPredicted RBP16.24■□□□□ 0.19
SHKBP1-227ENST00000602011 BICRALQ6AI39 1079 aa16.24■□□□□ 0.19
SHKBP1-227ENST00000602011 AAGABQ6PD74 315 aa16.24■□□□□ 0.19
SHKBP1-227ENST00000602011 ANGPTL8Q6UXH0 198 aa16.24■□□□□ 0.19
SHKBP1-227ENST00000602011 RELL1Q8IUW5 271 aa16.24■□□□□ 0.19
SHKBP1-227ENST00000602011 HGDQ93099 445 aa16.24■□□□□ 0.19
SHKBP1-227ENST00000602011 UCN3Q969E3 161 aa16.24■□□□□ 0.19
SHKBP1-227ENST00000602011 CTHRC1Q96CG8 243 aa16.24■□□□□ 0.19
SHKBP1-227ENST00000602011 SMR3AQ99954 134 aa16.24■□□□□ 0.19
SHKBP1-227ENST00000602011 YIPF4Q9BSR8 244 aa16.24■□□□□ 0.19
SHKBP1-227ENST00000602011 OSBPL11Q9BXB4 747 aa16.24■□□□□ 0.19
SHKBP1-227ENST00000602011 SHCBP1LQ9BZQ2 653 aa16.24■□□□□ 0.19
SHKBP1-227ENST00000602011 VPS11Q9H270 941 aa16.24■□□□□ 0.19
SHKBP1-227ENST00000602011 NEUROD4Q9HD90 331 aa16.24■□□□□ 0.19
SHKBP1-227ENST00000602011 NDRG3Q9UGV2 375 aa16.24■□□□□ 0.19
SHKBP1-227ENST00000602011 NFU1Q9UMS0 254 aa16.24■□□□□ 0.19
SHKBP1-227ENST00000602011 LRRC14BA6NHZ5 514 aa16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 OR6C70A6NIJ9 312 aa16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 EEF1E1-BLOC1S5C9J1V9 151 aa16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 EEF1E1O43324 174 aaKnown RBP16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 HSD3B1P14060 373 aa16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 DRD2P14416 443 aa16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 HSD3B2P26439 372 aa16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 CNTFP26441 200 aa16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 WNT3P56703 355 aa16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 C2orf54Q08AI8 447 aa16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 PLCXD2Q0VAA5 305 aa16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 MGAT2Q10469 447 aa16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 UAP1Q16222 522 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 ZNF572Q7Z3I7 529 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 ADGRE4PQ86SQ3 457 aa16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 BIVMQ86UB2 503 aa16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 OR52B6Q8NGF0 335 aa16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 SMPDL3BQ92485 455 aa16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 OMA1Q96E52 524 aa16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 PHF21BQ96EK2 531 aa16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 CDK15Q96Q40 435 aa16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 MRPL57Q9BQC6 102 aaKnown RBP16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 FUT8Q9BYC5 575 aa16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 MRPL1Q9BYD6 325 aaKnown RBP16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 BRINP2Q9C0B6 783 aa16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 OR2B2Q9GZK3 357 aa16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 ACSS3Q9H6R3 686 aa16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 PLEKHF2Q9H8W4 249 aa16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 BEX4Q9NWD9 120 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 MAT2BQ9NZL9 334 aa16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 KLRF1Q9NZS2 232 aa16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 PCTPQ9UKL6 214 aa16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 RPH3AQ9Y2J0 694 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-227ENST00000602011 NCKAP5O14513 1909 aa16.22■□□□□ 0.19
SHKBP1-227ENST00000602011 KDM4EB2RXH2 506 aaPredicted RBP16.22■□□□□ 0.19
SHKBP1-227ENST00000602011 ERAL1O75616 437 aaKnown RBP16.22■□□□□ 0.19
SHKBP1-227ENST00000602011 ATE1O95260 518 aa16.22■□□□□ 0.19
SHKBP1-227ENST00000602011 CRHP06850 196 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms