RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 FAM111BQ6SJ93 734 aa13.98□□□□□ -0.17
CMSS1-202ENST00000463526 PLXDC2Q6UX71 529 aa13.98□□□□□ -0.17
CMSS1-202ENST00000463526 FAM83FQ8NEG4 500 aaPredicted RBP13.98□□□□□ -0.17
CMSS1-202ENST00000463526 OR1J4Q8NGS1 313 aa13.98□□□□□ -0.17
CMSS1-202ENST00000463526 RHEBL1Q8TAI7 183 aa13.98□□□□□ -0.17
CMSS1-202ENST00000463526 WDR20Q8TBZ3 569 aa13.98□□□□□ -0.17
CMSS1-202ENST00000463526 RDH11Q8TC12 318 aa13.98□□□□□ -0.17
CMSS1-202ENST00000463526 MBD6Q96DN6 1003 aa13.98□□□□□ -0.17
CMSS1-202ENST00000463526 SERPINI1Q99574 410 aa13.98□□□□□ -0.17
CMSS1-202ENST00000463526 SMR3AQ99954 134 aa13.98□□□□□ -0.17
CMSS1-202ENST00000463526 BRINP2Q9C0B6 783 aa13.98□□□□□ -0.17
CMSS1-202ENST00000463526 NXF5Q9H1B4 397 aaKnown RBP13.98□□□□□ -0.17
CMSS1-202ENST00000463526 NOL11Q9H8H0 719 aaKnown RBP13.98□□□□□ -0.17
CMSS1-202ENST00000463526 RNF14Q9UBS8 474 aa13.98□□□□□ -0.17
CMSS1-202ENST00000463526 BCAP29Q9UHQ4 241 aa13.98□□□□□ -0.17
CMSS1-202ENST00000463526 DTX4Q9Y2E6 619 aa13.98□□□□□ -0.17
CMSS1-202ENST00000463526 MED12Q93074 2177 aa13.98□□□□□ -0.17
CMSS1-202ENST00000463526 KIAA1549Q9HCM3 1950 aa13.97□□□□□ -0.17
CMSS1-202ENST00000463526 MBD3L4A6NDZ8 208 aaPredicted RBP13.97□□□□□ -0.17
CMSS1-202ENST00000463526 MBD3L3A6NE82 208 aaPredicted RBP13.97□□□□□ -0.17
CMSS1-202ENST00000463526 MBD3L5A6NJ08 208 aaPredicted RBP13.97□□□□□ -0.17
CMSS1-202ENST00000463526 FOXE1O00358 373 aaPredicted RBP13.97□□□□□ -0.17
CMSS1-202ENST00000463526 CLDN9O95484 217 aa13.97□□□□□ -0.17
CMSS1-202ENST00000463526 ABCB1P08183 1280 aaPredicted RBP13.97□□□□□ -0.17
CMSS1-202ENST00000463526 TMIGD3P0DMS9 266 aaPredicted RBP13.97□□□□□ -0.17
CMSS1-202ENST00000463526 CYP4B1P13584 511 aa13.97□□□□□ -0.17
CMSS1-202ENST00000463526 CPMP14384 443 aa13.97□□□□□ -0.17
CMSS1-202ENST00000463526 GPX3P22352 226 aa13.97□□□□□ -0.17
CMSS1-202ENST00000463526 ABCD3P28288 659 aa13.97□□□□□ -0.17
CMSS1-202ENST00000463526 PTPN6P29350 595 aa13.97□□□□□ -0.17
CMSS1-202ENST00000463526 SOX18P35713 384 aa13.97□□□□□ -0.17
CMSS1-202ENST00000463526 SLCO1A2P46721 670 aa13.97□□□□□ -0.17
CMSS1-202ENST00000463526 FOXF2Q12947 444 aa13.97□□□□□ -0.17
CMSS1-202ENST00000463526 RCAN2Q14206 197 aa13.97□□□□□ -0.17
CMSS1-202ENST00000463526 EXOSC7Q15024 291 aaKnown RBP13.97□□□□□ -0.17
CMSS1-202ENST00000463526 ACAP2Q15057 778 aa13.97□□□□□ -0.17
CMSS1-202ENST00000463526 PCBP2Q15366 365 aaKnown RBP eCLIP13.97□□□□□ -0.178e-7■■■□□ 18.5
CMSS1-202ENST00000463526 CCNYL2Q5T2Q4 361 aa13.97□□□□□ -0.17
CMSS1-202ENST00000463526 TTC19Q6DKK2 380 aaPredicted RBP13.97□□□□□ -0.17
CMSS1-202ENST00000463526 LUZP2Q86TE4 346 aa13.97□□□□□ -0.17
CMSS1-202ENST00000463526 L3MBTL4Q8NA19 623 aa13.97□□□□□ -0.17
CMSS1-202ENST00000463526 MBD3L2Q8NHZ7 208 aaPredicted RBP13.97□□□□□ -0.17
CMSS1-202ENST00000463526 TMEM41AQ96HV5 264 aa13.97□□□□□ -0.17
CMSS1-202ENST00000463526 NODALQ96S42 347 aa13.97□□□□□ -0.17
CMSS1-202ENST00000463526 SECISBP2Q96T21 854 aaKnown RBP13.97□□□□□ -0.17
CMSS1-202ENST00000463526 RBM24Q9BX46 236 aaKnown RBP13.97□□□□□ -0.17
CMSS1-202ENST00000463526 CALHM2Q9HA72 323 aa13.97□□□□□ -0.17
CMSS1-202ENST00000463526 GALNT9Q9HCQ5 603 aa13.97□□□□□ -0.17
CMSS1-202ENST00000463526 SERHLQ9NQF3 203 aa13.97□□□□□ -0.17
CMSS1-202ENST00000463526 RYDENQ9NUL5 291 aaKnown RBP13.97□□□□□ -0.17
CMSS1-202ENST00000463526 EHD3Q9NZN3 535 aa13.97□□□□□ -0.17
CMSS1-202ENST00000463526 MAPRE3Q9UPY8 281 aa13.97□□□□□ -0.17
CMSS1-202ENST00000463526 IKBKGQ9Y6K9 419 aa13.97□□□□□ -0.17
CMSS1-202ENST00000463526 A0A096LPK6 155 aa13.96□□□□□ -0.17
CMSS1-202ENST00000463526 CLCA1A8K7I4 914 aa13.96□□□□□ -0.17
CMSS1-202ENST00000463526 OR7A17O14581 309 aa13.96□□□□□ -0.17
CMSS1-202ENST00000463526 UGDHO60701 494 aa13.96□□□□□ -0.17
CMSS1-202ENST00000463526 ERN1O75460 977 aaKnown RBP13.96□□□□□ -0.17
CMSS1-202ENST00000463526 ERAL1O75616 437 aaKnown RBP13.96□□□□□ -0.17
CMSS1-202ENST00000463526 PPM1BO75688 479 aa13.96□□□□□ -0.17
CMSS1-202ENST00000463526 FOSL1P15407 271 aa13.96□□□□□ -0.17
CMSS1-202ENST00000463526 PORP16435 677 aaPredicted RBP13.96□□□□□ -0.17
CMSS1-202ENST00000463526 CNTFP26441 200 aa13.96□□□□□ -0.17
CMSS1-202ENST00000463526 DEKP35659 375 aaKnown RBP13.96□□□□□ -0.17
CMSS1-202ENST00000463526 FEN1P39748 380 aaKnown RBP13.96□□□□□ -0.17
CMSS1-202ENST00000463526 CPA2P48052 419 aa13.96□□□□□ -0.17
CMSS1-202ENST00000463526 CCNG1P51959 295 aa13.96□□□□□ -0.17
CMSS1-202ENST00000463526 NHSL2Q5HYW2 709 aa13.96□□□□□ -0.17
CMSS1-202ENST00000463526 PTGR2Q8N8N7 351 aaPredicted RBP13.96□□□□□ -0.17
CMSS1-202ENST00000463526 SPATA4Q8NEY3 305 aa13.96□□□□□ -0.17
CMSS1-202ENST00000463526 OR7G1Q8NGA0 311 aa13.96□□□□□ -0.17
CMSS1-202ENST00000463526 OR52B6Q8NGF0 335 aa13.96□□□□□ -0.17
CMSS1-202ENST00000463526 FBXO25Q8TCJ0 367 aa13.96□□□□□ -0.17
CMSS1-202ENST00000463526 SLC44A1Q8WWI5 657 aa13.96□□□□□ -0.17
CMSS1-202ENST00000463526 PHF21BQ96EK2 531 aa13.96□□□□□ -0.17
CMSS1-202ENST00000463526 TUBA1CQ9BQE3 449 aa13.96□□□□□ -0.17
CMSS1-202ENST00000463526 ITPAQ9BY32 194 aa13.96□□□□□ -0.17
CMSS1-202ENST00000463526 MRPL1Q9BYD6 325 aaKnown RBP13.96□□□□□ -0.17
CMSS1-202ENST00000463526 VPS11Q9H270 941 aa13.96□□□□□ -0.17
CMSS1-202ENST00000463526 PLEKHF2Q9H8W4 249 aa13.96□□□□□ -0.17
CMSS1-202ENST00000463526 PSD3Q9NYI0 1048 aa13.96□□□□□ -0.17
CMSS1-202ENST00000463526 KLRF1Q9NZS2 232 aa13.96□□□□□ -0.17
CMSS1-202ENST00000463526 UTP11Q9Y3A2 253 aaKnown RBP13.96□□□□□ -0.17
CMSS1-202ENST00000463526 TNPO3Q9Y5L0 923 aaKnown RBP13.96□□□□□ -0.17
CMSS1-202ENST00000463526 HRNRQ86YZ3 2850 aaPredicted RBP13.96□□□□□ -0.18
CMSS1-202ENST00000463526 H0Y3Z8 333 aa13.95□□□□□ -0.18
CMSS1-202ENST00000463526 ICOSLGO75144 302 aa13.95□□□□□ -0.18
CMSS1-202ENST00000463526 SEMA3DO95025 777 aa13.95□□□□□ -0.18
CMSS1-202ENST00000463526 KLHL2O95198 593 aa13.95□□□□□ -0.18
CMSS1-202ENST00000463526 S1PR1P21453 382 aa13.95□□□□□ -0.18
CMSS1-202ENST00000463526 TCEA1P23193 301 aaKnown RBP13.95□□□□□ -0.18
CMSS1-202ENST00000463526 TYK2P29597 1187 aa13.95□□□□□ -0.18
CMSS1-202ENST00000463526 GCKP35557 465 aa13.95□□□□□ -0.18
CMSS1-202ENST00000463526 STARP49675 285 aa13.95□□□□□ -0.18
CMSS1-202ENST00000463526 LTBQ06643 244 aa13.95□□□□□ -0.18
CMSS1-202ENST00000463526 NAB1Q13506 487 aa13.95□□□□□ -0.18
CMSS1-202ENST00000463526 FAM180BQ6P0A1 224 aa13.95□□□□□ -0.18
CMSS1-202ENST00000463526 KLC3Q6P597 504 aa13.95□□□□□ -0.18
CMSS1-202ENST00000463526 VWA5B2Q8N398 1253 aa13.95□□□□□ -0.18
CMSS1-202ENST00000463526 SIMC1Q8NDZ2 872 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms