RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 AIF1P55008 147 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 CDH6P55285 790 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 C21orf58P58505 322 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 FUT7Q11130 342 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 HLXQ14774 488 aaPredicted RBP4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 GUSBP1Q15486 140 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 MFSD4BQ5TF39 518 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 GJB7Q6PEY0 223 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 KRBA2Q6ZNG9 492 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 BBS5Q8N3I7 341 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 FITM2Q8N6M3 262 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 CSNK1A1LQ8N752 337 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 TMEM35BQ8NCS4 154 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 SLC22A18Q96BI1 424 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 CCDC138Q96M89 665 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 C8orf49Q96NF6 230 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 DUX5Q96PT3 197 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 VRK1Q99986 396 aaPredicted RBP4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 B9D2Q9BPU9 175 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 PIMREGQ9BSJ6 248 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 KLHL4Q9C0H6 718 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 BPESC1Q9GZL8 116 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 CBLN4Q9NTU7 201 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 ETNK2Q9NVF9 386 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 PARPBPQ9NWS1 579 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 HIF1ANQ9NWT6 349 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 HEY2Q9UBP5 337 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 FETUBQ9UGM5 382 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 SLC23A1Q9UHI7 598 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 FAM169AQ9Y6X4 670 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 DNAH11Q96DT5 4516 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 LOC105371242A0A075B767 164 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 IGKV3D-11A0A0A0MRZ8 115 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 IGKV1-8A0A0C4DH67 115 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 A0A1B0GUS0 222 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 GAGE12BA1L429 117 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 LRRD1A4D1F6 860 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 GAGE12HA6NDE8 117 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 DNAJC9-AS1A6NH13 148 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 E7EQL1 145 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 H3BUI4 141 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 CLDN34H7C241 214 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 EEF2KO00418 725 aaKnown RBP4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 EMC8O43402 210 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 TRIM3O75382 744 aaPredicted RBP4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 GPC4O75487 556 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 FSHBP01225 129 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 CD1AP06126 327 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 CYP4B1P13584 511 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 HK1P19367 917 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 MSH3P20585 1137 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 GIFP27352 417 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 CDK9P50750 372 aaKnown RBP4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 CLCN2P51788 898 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 RAP2BP61225 183 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 KCNJ2P63252 427 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 PLOD1Q02809 727 aaPredicted RBP4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 STIM1Q13586 685 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 RCAN2Q14206 197 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 ZNF791Q3KP31 576 aaPredicted RBP4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 IQCCQ4KMZ1 466 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 KLHL22Q53GT1 634 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 FNDC7Q5VTL7 733 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 SBSNQ6UWP8 590 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 FAM151BQ6UXP7 276 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 ZNF793Q6ZN11 406 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 C17orf107Q6ZR85 190 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 CYP4V2Q6ZWL3 525 aaPredicted RBP4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 ZBTB34Q8NCN2 500 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 PPHLN1Q8NEY8 458 aaKnown RBP4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 B3GNT7Q8NFL0 401 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 OR2L3Q8NG85 312 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 OR2A1Q8NGT9 310 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 OR2L8Q8NGY9 312 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 ABTB1Q969K4 478 aaPredicted RBP4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 TADA1Q96BN2 335 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 ZNF653Q96CK0 615 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 KRT12Q99456 494 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 ADGRE3Q9BY15 652 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 GPR63Q9BZJ6 419 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 OR10A4Q9H209 315 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 EXOC1Q9NV70 894 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 FAIMQ9NVQ4 179 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 CWC15Q9P013 229 aaKnown RBP4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 ARMCX3Q9UH62 379 aaPredicted RBP4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 FBXW2Q9UKT8 454 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 MOKQ9UQ07 419 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 ASF1AQ9Y294 204 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 TDRKHQ9Y2W6 561 aaKnown RBP4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 U3KQK5 164 aa4.61□□□□□ -1.67
SBDSP1-204ENST00000453858 A0A1W2PPV9 198 aa4.6□□□□□ -1.67
SBDSP1-204ENST00000453858 TCRBV7S2A1N4TA0A589 114 aa4.6□□□□□ -1.67
SBDSP1-204ENST00000453858 B4DSR2 109 aa4.6□□□□□ -1.67
SBDSP1-204ENST00000453858 SGK494L7N484 410 aa4.6□□□□□ -1.67
SBDSP1-204ENST00000453858 F2RL2O00254 374 aa4.6□□□□□ -1.67
SBDSP1-204ENST00000453858 WWP2O00308 870 aa4.6□□□□□ -1.67
SBDSP1-204ENST00000453858 DHHO43323 396 aa4.6□□□□□ -1.67
SBDSP1-204ENST00000453858 HCRTR2O43614 444 aa4.6□□□□□ -1.67
SBDSP1-204ENST00000453858 CDC123O75794 336 aaPredicted RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms